RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 CKMP06732 381 aa16.7■□□□□ 0.26
LIG1-214ENST00000597146 TIE1P35590 1138 aa16.7■□□□□ 0.26
LIG1-214ENST00000597146 MATR3P43243 847 aaKnown RBP eCLIP16.7■□□□□ 0.26
LIG1-214ENST00000597146 RPL6Q02878 288 aaKnown RBP16.7■□□□□ 0.26
LIG1-214ENST00000597146 MCL1Q07820 350 aa16.7■□□□□ 0.26
LIG1-214ENST00000597146 HAUS3Q68CZ6 603 aa16.7■□□□□ 0.26
LIG1-214ENST00000597146 MARCH9Q86YJ5 346 aa16.7■□□□□ 0.26
LIG1-214ENST00000597146 NAXDQ8IW45 347 aa16.7■□□□□ 0.26
LIG1-214ENST00000597146 PGBD3Q8N328 593 aa16.7■□□□□ 0.26
LIG1-214ENST00000597146 IL17RCQ8NAC3 791 aa16.7■□□□□ 0.26
LIG1-214ENST00000597146 SPPL2BQ8TCT7 592 aa16.7■□□□□ 0.26
LIG1-214ENST00000597146 SH3RF2Q8TEC5 729 aa16.7■□□□□ 0.26
LIG1-214ENST00000597146 RUSC1Q9BVN2 902 aa16.7■□□□□ 0.26
LIG1-214ENST00000597146 TMLHEQ9NVH6 421 aa16.7■□□□□ 0.26
LIG1-214ENST00000597146 NOL7Q9UMY1 257 aaKnown RBP16.7■□□□□ 0.26
LIG1-214ENST00000597146 KIAA1024Q9UPX6 916 aa16.7■□□□□ 0.26
LIG1-214ENST00000597146 SFI1A8K8P3 1242 aa16.69■□□□□ 0.26
LIG1-214ENST00000597146 CLDN3O15551 220 aa16.69■□□□□ 0.26
LIG1-214ENST00000597146 GJB3O75712 270 aa16.69■□□□□ 0.26
LIG1-214ENST00000597146 CLTAP09496 248 aa16.69■□□□□ 0.26
LIG1-214ENST00000597146 OR52Z1P0C646 297 aa16.69■□□□□ 0.26
LIG1-214ENST00000597146 PLA2G2AP14555 144 aa16.69■□□□□ 0.26
LIG1-214ENST00000597146 MRPS21P82921 87 aaKnown RBP16.69■□□□□ 0.26
LIG1-214ENST00000597146 STRN3Q13033 797 aa16.69■□□□□ 0.26
LIG1-214ENST00000597146 NR1H3Q13133 447 aa16.69■□□□□ 0.26
LIG1-214ENST00000597146 NBR1Q14596 966 aa16.69■□□□□ 0.26
LIG1-214ENST00000597146 SPDYCQ5MJ68 293 aa16.69■□□□□ 0.26
LIG1-214ENST00000597146 EMC10Q5UCC4 262 aa16.69■□□□□ 0.26
LIG1-214ENST00000597146 SLCO6A1Q86UG4 719 aa16.69■□□□□ 0.26
LIG1-214ENST00000597146 C2orf15Q8WU43 125 aaKnown RBP16.69■□□□□ 0.26
LIG1-214ENST00000597146 PI4K2AQ9BTU6 479 aa16.69■□□□□ 0.26
LIG1-214ENST00000597146 TMEM206Q9H813 350 aa16.69■□□□□ 0.26
LIG1-214ENST00000597146 POLMQ9NP87 494 aaPredicted RBP16.69■□□□□ 0.26
LIG1-214ENST00000597146 DDX19AQ9NUU7 478 aaKnown RBP16.69■□□□□ 0.26
LIG1-214ENST00000597146 RBM19Q9Y4C8 960 aaKnown RBP16.69■□□□□ 0.26
LIG1-214ENST00000597146 TRAV19A0A0A6YYK7 116 aa16.68■□□□□ 0.26
LIG1-214ENST00000597146 E9PMD0 336 aa16.68■□□□□ 0.26
LIG1-214ENST00000597146 AP5Z1O43299 807 aa16.68■□□□□ 0.26
LIG1-214ENST00000597146 XPOTO43592 962 aaKnown RBP16.68■□□□□ 0.26
LIG1-214ENST00000597146 ADAM23O75077 832 aa16.68■□□□□ 0.26
LIG1-214ENST00000597146 NFATC1O95644 943 aa16.68■□□□□ 0.26
LIG1-214ENST00000597146 USP17L7P0C7H9 530 aa16.68■□□□□ 0.26
LIG1-214ENST00000597146 ZNF174Q15697 407 aa16.68■□□□□ 0.26
LIG1-214ENST00000597146 ENOX2Q16206 610 aaKnown RBP16.68■□□□□ 0.26
LIG1-214ENST00000597146 SPATA1Q5VX52 437 aa16.68■□□□□ 0.26
LIG1-214ENST00000597146 C9orf57Q5W0N0 161 aa16.68■□□□□ 0.26
LIG1-214ENST00000597146 MCTP1Q6DN14 999 aa16.68■□□□□ 0.26
LIG1-214ENST00000597146 TOGARAM2Q6ZUX3 1019 aa16.68■□□□□ 0.26
LIG1-214ENST00000597146 ARL14EPQ8N8R7 260 aaPredicted RBP16.68■□□□□ 0.26
LIG1-214ENST00000597146 SPRYD3Q8NCJ5 442 aa16.68■□□□□ 0.26
LIG1-214ENST00000597146 FBXO18Q8NFZ0 1043 aa16.68■□□□□ 0.26
LIG1-214ENST00000597146 DRC1Q96MC2 740 aa16.68■□□□□ 0.26
LIG1-214ENST00000597146 UBL7Q96S82 380 aaPredicted RBP16.68■□□□□ 0.26
LIG1-214ENST00000597146 FOXP1Q9H334 677 aaPredicted RBP16.68■□□□□ 0.26
LIG1-214ENST00000597146 C2orf78A6NCI8 922 aa16.67■□□□□ 0.26
LIG1-214ENST00000597146 H3BQV1 296 aa16.67■□□□□ 0.26
LIG1-214ENST00000597146 PRPF40AO75400 957 aaKnown RBP16.67■□□□□ 0.26
LIG1-214ENST00000597146 CYP17A1P05093 508 aa16.67■□□□□ 0.26
LIG1-214ENST00000597146 NFICP08651 508 aa16.67■□□□□ 0.26
LIG1-214ENST00000597146 CSH1P0DML2 217 aa16.67■□□□□ 0.26
LIG1-214ENST00000597146 CSH2P0DML3 217 aa16.67■□□□□ 0.26
LIG1-214ENST00000597146 MUTP22033 750 aa16.67■□□□□ 0.26
LIG1-214ENST00000597146 SLC6A11P48066 632 aa16.67■□□□□ 0.26
LIG1-214ENST00000597146 KDSRQ06136 332 aa16.67■□□□□ 0.26
LIG1-214ENST00000597146 ZNF33AQ06730 810 aa16.67■□□□□ 0.26
LIG1-214ENST00000597146 ST3GAL1Q11201 340 aa16.67■□□□□ 0.26
LIG1-214ENST00000597146 DDR2Q16832 855 aa16.67■□□□□ 0.26
LIG1-214ENST00000597146 WSCD1Q658N2 575 aa16.67■□□□□ 0.26
LIG1-214ENST00000597146 JADE1Q6IE81 842 aa16.67■□□□□ 0.26
LIG1-214ENST00000597146 SLC41A1Q8IVJ1 513 aa16.67■□□□□ 0.26
LIG1-214ENST00000597146 TMEM161BQ8NDZ6 487 aa16.67■□□□□ 0.26
LIG1-214ENST00000597146 SLC39A7Q92504 469 aa16.67■□□□□ 0.26
LIG1-214ENST00000597146 FAM212AQ96EL1 285 aa16.67■□□□□ 0.26
LIG1-214ENST00000597146 APOBEC2Q9Y235 224 aaKnown RBP16.67■□□□□ 0.26
LIG1-214ENST00000597146 PCDHB5Q9Y5E4 795 aa16.67■□□□□ 0.26
LIG1-214ENST00000597146 CYB561D2O14569 222 aa16.66■□□□□ 0.26
LIG1-214ENST00000597146 SCAMP3O14828 347 aaKnown RBP16.66■□□□□ 0.26
LIG1-214ENST00000597146 SYPP08247 313 aa16.66■□□□□ 0.26
LIG1-214ENST00000597146 MAPTP10636 758 aaKnown RBP16.66■□□□□ 0.26
LIG1-214ENST00000597146 ZXDBP98169 803 aa16.66■□□□□ 0.26
LIG1-214ENST00000597146 CYP4F3Q08477 520 aa16.66■□□□□ 0.26
LIG1-214ENST00000597146 RAD51AP2Q09MP3 1159 aa16.66■□□□□ 0.26
LIG1-214ENST00000597146 BYSLQ13895 437 aaKnown RBP16.66■□□□□ 0.26
LIG1-214ENST00000597146 EOGTQ5NDL2 527 aa16.66■□□□□ 0.26
LIG1-214ENST00000597146 ZPBP2Q6X784 338 aa16.66■□□□□ 0.26
LIG1-214ENST00000597146 C12orf40Q86WS4 652 aa16.66■□□□□ 0.26
LIG1-214ENST00000597146 METTL23Q86XA0 190 aa16.66■□□□□ 0.26
LIG1-214ENST00000597146 HSPA12BQ96MM6 686 aa16.66■□□□□ 0.26
LIG1-214ENST00000597146 PYM1Q9BRP8 204 aaKnown RBP16.66■□□□□ 0.26
LIG1-214ENST00000597146 GCNT4Q9P109 453 aa16.66■□□□□ 0.26
LIG1-214ENST00000597146 DKK4Q9UBT3 224 aa16.66■□□□□ 0.26
LIG1-214ENST00000597146 PTPRQQ9UMZ3 2332 aa16.66■□□□□ 0.26
LIG1-214ENST00000597146 SMC3Q9UQE7 1217 aa16.66■□□□□ 0.26
LIG1-214ENST00000597146 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.66■□□□□ 0.26
LIG1-214ENST00000597146 PIRO00625 290 aa16.65■□□□□ 0.26
LIG1-214ENST00000597146 FAM189A1O60320 539 aa16.65■□□□□ 0.26
LIG1-214ENST00000597146 NOL4O94818 638 aa16.65■□□□□ 0.26
LIG1-214ENST00000597146 KAT7O95251 611 aa16.65■□□□□ 0.26
LIG1-214ENST00000597146 KIR2DL1P43626 348 aaPredicted RBP16.65■□□□□ 0.26
LIG1-214ENST00000597146 SLC14A1Q13336 389 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms