RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 SPATA2LQ8IUW3 424 aaPredicted RBP15.49■□□□□ 0.07
VRK3-212ENST00000596814 IPO4Q8TEX9 1081 aaKnown RBP15.49■□□□□ 0.07
VRK3-212ENST00000596814 RFFLQ8WZ73 363 aa15.49■□□□□ 0.07
VRK3-212ENST00000596814 ARHGEF26Q96DR7 871 aa15.49■□□□□ 0.07
VRK3-212ENST00000596814 CPXM1Q96SM3 734 aa15.49■□□□□ 0.07
VRK3-212ENST00000596814 SYNCQ9H7C4 482 aa15.49■□□□□ 0.07
VRK3-212ENST00000596814 CNOT8Q9UFF9 292 aaKnown RBP15.49■□□□□ 0.07
VRK3-212ENST00000596814 DUSP10Q9Y6W6 482 aa15.49■□□□□ 0.07
VRK3-212ENST00000596814 A0A0A6YYK5 440 aaPredicted RBP15.48■□□□□ 0.07
VRK3-212ENST00000596814 MACROD2A1Z1Q3 448 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 TULP2O00295 520 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 XPO1O14980 1071 aaKnown RBP15.48■□□□□ 0.07
VRK3-212ENST00000596814 CAPN15O75808 1086 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 CPB1P15086 417 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 CDR1P51861 262 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 NFE2Q16621 373 aaPredicted RBP15.48■□□□□ 0.07
VRK3-212ENST00000596814 C2CD6Q53TS8 623 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 VPS52Q8N1B4 723 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 KLHL23Q8NBE8 558 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 SLC35F5Q8WV83 523 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 C16orf45Q96MC5 204 aaPredicted RBP15.48■□□□□ 0.07
VRK3-212ENST00000596814 AVENQ9NQS1 362 aaPredicted RBP15.48■□□□□ 0.07
VRK3-212ENST00000596814 ST7Q9NRC1 585 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 MYO1AQ9UBC5 1043 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 STRIP2Q9ULQ0 834 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 BACE2Q9Y5Z0 518 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 C2CD2LO14523 706 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 CYP1A2P05177 515 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 MYOGP15173 224 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 RRM1P23921 792 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 BMPR1AP36894 532 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 PLA2G4AP47712 749 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 RGS7P49802 495 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 RSPO2Q6UXX9 243 aaPredicted RBP15.48■□□□□ 0.07
VRK3-212ENST00000596814 CLEC20AQ6ZU45 233 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 RHOT2Q8IXI1 618 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 FBXO22Q8NEZ5 403 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 STK32AQ8WU08 396 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 C18orf8Q96DM3 657 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 PLVAPQ9BX97 442 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 MIS12Q9H081 205 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 SALL4Q9UJQ4 1053 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 PCDHA11Q9Y5I1 949 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 CDY1Q9Y6F8 540 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 PATJQ8NI35 1801 aa15.48■□□□□ 0.07
VRK3-212ENST00000596814 KIF5CO60282 957 aa15.47■□□□□ 0.07
VRK3-212ENST00000596814 ERBB2P04626 1255 aa15.47■□□□□ 0.07
VRK3-212ENST00000596814 CA3P07451 260 aa15.47■□□□□ 0.07
VRK3-212ENST00000596814 BDNFP23560 247 aa15.47■□□□□ 0.07
VRK3-212ENST00000596814 NOP2P46087 812 aaKnown RBP15.47■□□□□ 0.07
VRK3-212ENST00000596814 NAP1L1P55209 391 aaKnown RBP15.47■□□□□ 0.07
VRK3-212ENST00000596814 ARPP19P56211 112 aa15.47■□□□□ 0.07
VRK3-212ENST00000596814 MAP3K7CLP57077 242 aa15.47■□□□□ 0.07
VRK3-212ENST00000596814 PTPN14Q15678 1187 aa15.47■□□□□ 0.07
VRK3-212ENST00000596814 CYP4A22Q5TCH4 519 aa15.47■□□□□ 0.07
VRK3-212ENST00000596814 SLC8B1Q6J4K2 584 aa15.47■□□□□ 0.07
VRK3-212ENST00000596814 PMF1Q6P1K2 205 aa15.47■□□□□ 0.07
VRK3-212ENST00000596814 NYAP1Q6ZVC0 841 aa15.47■□□□□ 0.07
VRK3-212ENST00000596814 FUBP3Q96I24 572 aaKnown RBP eCLIP15.47■□□□□ 0.07
VRK3-212ENST00000596814 C17orf80Q9BSJ5 609 aa15.47■□□□□ 0.07
VRK3-212ENST00000596814 SLC4A5Q9BY07 1137 aa15.47■□□□□ 0.07
VRK3-212ENST00000596814 RHOBTB2Q9BYZ6 727 aa15.47■□□□□ 0.07
VRK3-212ENST00000596814 ZBP1Q9H171 429 aa15.47■□□□□ 0.07
VRK3-212ENST00000596814 DMAP1Q9NPF5 467 aaPredicted RBP15.47■□□□□ 0.07
VRK3-212ENST00000596814 CYLDQ9NQC7 956 aa15.47■□□□□ 0.07
VRK3-212ENST00000596814 ABI2Q9NYB9 513 aaPredicted RBP15.47■□□□□ 0.07
VRK3-212ENST00000596814 CTTNBP2NLQ9P2B4 639 aa15.47■□□□□ 0.07
VRK3-212ENST00000596814 TJP2Q9UDY2 1190 aa15.47■□□□□ 0.07
VRK3-212ENST00000596814 PAXBP1Q9Y5B6 917 aa15.47■□□□□ 0.07
VRK3-212ENST00000596814 E5RJQ4 531 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 BUB1O43683 1085 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 BEST1O76090 585 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 ARHGEF15O94989 841 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 DNAJB2P25686 324 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 GABRB2P47870 512 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 CACNA2D1P54289 1103 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 GSCP56915 257 aaPredicted RBP15.46■□□□□ 0.07
VRK3-212ENST00000596814 SNX16P57768 344 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 SMARCB1Q12824 385 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 GPR17Q13304 367 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 CFAP221Q4G0U5 840 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 PHLDB2Q86SQ0 1253 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 PIGZQ86VD9 579 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 GPR65Q8IYL9 337 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 RNF10Q8N5U6 811 aaKnown RBP15.46■□□□□ 0.07
VRK3-212ENST00000596814 SLC35G2Q8TBE7 412 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 HSFY1Q96LI6 401 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 PGLYRP2Q96PD5 576 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 SMOQ99835 787 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 NUP85Q9BW27 656 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 IRX2Q9BZI1 471 aaPredicted RBP15.46■□□□□ 0.07
VRK3-212ENST00000596814 MRPL17Q9NRX2 175 aaKnown RBP15.46■□□□□ 0.07
VRK3-212ENST00000596814 WDR35Q9P2L0 1181 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 UVRAGQ9P2Y5 699 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 CHORDC1Q9UHD1 332 aaPredicted RBP15.46■□□□□ 0.07
VRK3-212ENST00000596814 LZTS1Q9Y250 596 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 PCDHB5Q9Y5E4 795 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 SCINQ9Y6U3 715 aa15.46■□□□□ 0.07
VRK3-212ENST00000596814 MTMR11A4FU01 709 aa15.46■□□□□ 0.06
VRK3-212ENST00000596814 C5orf67F2Z3F1 127 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms