RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 MYO1EQ12965 1108 aa11.32□□□□□ -0.6
CHMP2A-202ENST00000596708 ZNF77Q15935 545 aa11.32□□□□□ -0.6
CHMP2A-202ENST00000596708 NAIF1Q69YI7 327 aaPredicted RBP11.32□□□□□ -0.6
CHMP2A-202ENST00000596708 FAM173BQ6P4H8 233 aa11.32□□□□□ -0.6
CHMP2A-202ENST00000596708 C4orf50Q6ZRC1 276 aa11.32□□□□□ -0.6
CHMP2A-202ENST00000596708 ARL14EPQ8N8R7 260 aaPredicted RBP11.32□□□□□ -0.6
CHMP2A-202ENST00000596708 SPATA18Q8TC71 538 aa11.32□□□□□ -0.6
CHMP2A-202ENST00000596708 TRMT2BQ96GJ1 504 aaKnown RBP11.32□□□□□ -0.6
CHMP2A-202ENST00000596708 MYRFLQ96LU7 910 aa11.32□□□□□ -0.6
CHMP2A-202ENST00000596708 SLC22A12Q96S37 553 aa11.32□□□□□ -0.6
CHMP2A-202ENST00000596708 MTMR12Q9C0I1 747 aa11.32□□□□□ -0.6
CHMP2A-202ENST00000596708 SMOC1Q9H4F8 434 aa11.32□□□□□ -0.6
CHMP2A-202ENST00000596708 TMEM206Q9H813 350 aa11.32□□□□□ -0.6
CHMP2A-202ENST00000596708 OLFML3Q9NRN5 406 aa11.32□□□□□ -0.6
CHMP2A-202ENST00000596708 WNT6Q9Y6F9 365 aa11.32□□□□□ -0.6
CHMP2A-202ENST00000596708 ACACBO00763 2458 aa11.32□□□□□ -0.6
CHMP2A-202ENST00000596708 ADAMTS9Q9P2N4 1935 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 GABRDO14764 452 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 ATP2C2O75185 946 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 AKAP3O75969 853 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 TNNC2P02585 160 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 HDCP19113 662 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 GRIK1P39086 918 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 DGKEP52429 567 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 LIMK1P53667 647 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 DMC1Q14565 340 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 KCNB1Q14721 858 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 SURF1Q15526 300 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 ST3GAL2Q16842 350 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 CCDC142Q17RM4 750 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 SOWAHAQ2M3V2 549 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 PLK5Q496M5 336 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 CFAP221Q4G0U5 840 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 DPH6Q7L8W6 267 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 CCDC65Q8IXS2 484 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 PDILTQ8N807 584 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 CXorf38Q8TB03 319 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 SH3RF2Q8TEC5 729 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 ATP2A3Q93084 1043 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 ACDQ96AP0 544 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 FUBP3Q96I24 572 aaKnown RBP eCLIP11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 HPDLQ96IR7 371 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 PKMYT1Q99640 499 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 SYT15Q9BQS2 421 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 FGFBP2Q9BYJ0 223 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 RXFP3Q9NSD7 469 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 INTS13Q9NVM9 706 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 SIX4Q9UIU6 781 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 CDH9Q9ULB4 789 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 PCDHGA5Q9Y5G8 931 aa11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 ASCC3Q8N3C0 2202 aaKnown RBP11.31□□□□□ -0.6
CHMP2A-202ENST00000596708 C2orf78A6NCI8 922 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 ZNF233A6NK53 670 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 DCLK1O15075 740 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 KIAA0391O15091 583 aaKnown RBP11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 RHOBTB1O94844 696 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 APBB3O95704 486 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 PDGFRBP09619 1106 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 BDNFP23560 247 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 LMO2P25791 158 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 ANXA13P27216 316 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 GBP1P32455 592 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 MPLP40238 635 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 MAGEA11P43364 429 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 PSMC1P62191 440 aaKnown RBP11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 CYP27A1Q02318 531 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 CREB5Q02930 508 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 USP4Q13107 963 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 RESTQ13127 1097 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 CUL4AQ13619 759 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 ELF2Q15723 593 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 DUOXA2Q1HG44 320 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 EML3Q32P44 896 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 STPG1Q5TH74 334 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 FAM171BQ6P995 826 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 STXBP4Q6ZWJ1 553 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 SYT13Q7L8C5 426 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 OR5B17Q8NGF7 314 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 MYLPFQ96A32 169 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 ZC3H10Q96K80 434 aaKnown RBP11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 MMS19Q96T76 1030 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 LINC00597Q9H2U6 94 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 VPS45Q9NRW7 570 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 TRPM5Q9NZQ8 1165 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 GCNT4Q9P109 453 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 PCNX2A6NKB5 2137 aa11.3□□□□□ -0.6
CHMP2A-202ENST00000596708 FRMD3A2A2Y4 597 aa11.29□□□□□ -0.6
CHMP2A-202ENST00000596708 NFATC1O95644 943 aa11.29□□□□□ -0.6
CHMP2A-202ENST00000596708 ABL1P00519 1130 aa11.29□□□□□ -0.6
CHMP2A-202ENST00000596708 SYT1P21579 422 aa11.29□□□□□ -0.6
CHMP2A-202ENST00000596708 PDE6CP51160 858 aa11.29□□□□□ -0.6
CHMP2A-202ENST00000596708 SEC13P55735 322 aa11.29□□□□□ -0.6
CHMP2A-202ENST00000596708 SLC39A14Q15043 492 aa11.29□□□□□ -0.6
CHMP2A-202ENST00000596708 MAPRE1Q15691 268 aaKnown RBP11.29□□□□□ -0.6
CHMP2A-202ENST00000596708 PLA2G2CQ5R387 149 aa11.29□□□□□ -0.6
CHMP2A-202ENST00000596708 N4BP2L1Q5TBK1 243 aaPredicted RBP11.29□□□□□ -0.6
CHMP2A-202ENST00000596708 RNF43Q68DV7 783 aa11.29□□□□□ -0.6
CHMP2A-202ENST00000596708 VSTM1Q6UX27 236 aa11.29□□□□□ -0.6
CHMP2A-202ENST00000596708 DENND5BQ6ZUT9 1274 aa11.29□□□□□ -0.6
CHMP2A-202ENST00000596708 HS2ST1Q7LGA3 356 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms