RNA–Protein interactions for RNA: ENST00000596399.1

LIM2-202, Transcript of lens intrinsic membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIM2, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-202ENST00000596399 MYLPFQ96A32 169 aa17.22■□□□□ 0.35
LIM2-202ENST00000596399 HHIPQ96QV1 700 aa17.22■□□□□ 0.35
LIM2-202ENST00000596399 P2RY13Q9BPV8 354 aa17.22■□□□□ 0.35
LIM2-202ENST00000596399 SMOC1Q9H4F8 434 aa17.22■□□□□ 0.35
LIM2-202ENST00000596399 GCNT4Q9P109 453 aa17.22■□□□□ 0.35
LIM2-202ENST00000596399 UXTQ9UBK9 157 aaPredicted RBP17.22■□□□□ 0.35
LIM2-202ENST00000596399 SLC8A2Q9UPR5 921 aa17.22■□□□□ 0.35
LIM2-202ENST00000596399 LAMA1P25391 3075 aa17.21■□□□□ 0.35
LIM2-202ENST00000596399 TRAV19A0A0A6YYK7 116 aa17.21■□□□□ 0.35
LIM2-202ENST00000596399 ZNF233A6NK53 670 aa17.21■□□□□ 0.35
LIM2-202ENST00000596399 SLC30A4O14863 429 aa17.21■□□□□ 0.35
LIM2-202ENST00000596399 STX6O43752 255 aa17.21■□□□□ 0.35
LIM2-202ENST00000596399 RPP40O75818 363 aaKnown RBP17.21■□□□□ 0.35
LIM2-202ENST00000596399 CST3P01034 146 aaPredicted RBP17.21■□□□□ 0.35
LIM2-202ENST00000596399 TNNC2P02585 160 aa17.21■□□□□ 0.35
LIM2-202ENST00000596399 USP17L7P0C7H9 530 aa17.21■□□□□ 0.35
LIM2-202ENST00000596399 PCSK1P29120 753 aa17.21■□□□□ 0.35
LIM2-202ENST00000596399 CYP27A1Q02318 531 aa17.21■□□□□ 0.35
LIM2-202ENST00000596399 MYO1EQ12965 1108 aa17.21■□□□□ 0.35
LIM2-202ENST00000596399 USP4Q13107 963 aa17.21■□□□□ 0.35
LIM2-202ENST00000596399 PDGFRLQ15198 375 aa17.21■□□□□ 0.35
LIM2-202ENST00000596399 EML3Q32P44 896 aa17.21■□□□□ 0.35
LIM2-202ENST00000596399 RPLP0P6Q8NHW5 317 aa17.21■□□□□ 0.35
LIM2-202ENST00000596399 SH3RF2Q8TEC5 729 aa17.21■□□□□ 0.35
LIM2-202ENST00000596399 GAB3Q8WWW8 586 aa17.21■□□□□ 0.35
LIM2-202ENST00000596399 DHX58Q96C10 678 aa17.21■□□□□ 0.35
LIM2-202ENST00000596399 MRPL45Q9BRJ2 306 aaKnown RBP17.21■□□□□ 0.35
LIM2-202ENST00000596399 TRIM9Q9C026 710 aa17.21■□□□□ 0.35
LIM2-202ENST00000596399 KBTBD4Q9NVX7 518 aa17.21■□□□□ 0.35
LIM2-202ENST00000596399 MAGEC2Q9UBF1 373 aaPredicted RBP17.21■□□□□ 0.35
LIM2-202ENST00000596399 MORC2Q9Y6X9 1032 aaPredicted RBP17.21■□□□□ 0.35
LIM2-202ENST00000596399 SDK1Q7Z5N4 2213 aa17.21■□□□□ 0.35
LIM2-202ENST00000596399 RALGAPA1Q6GYQ0 2036 aa17.21■□□□□ 0.35
LIM2-202ENST00000596399 ANAPC1Q9H1A4 1944 aa17.2■□□□□ 0.34
LIM2-202ENST00000596399 SOBPA7XYQ1 873 aa17.2■□□□□ 0.34
LIM2-202ENST00000596399 SCAMP3O14828 347 aaKnown RBP17.2■□□□□ 0.34
LIM2-202ENST00000596399 DCLK1O15075 740 aa17.2■□□□□ 0.34
LIM2-202ENST00000596399 CLIC2O15247 247 aa17.2■□□□□ 0.34
LIM2-202ENST00000596399 SPTLC2O15270 562 aa17.2■□□□□ 0.34
LIM2-202ENST00000596399 TGFB1I1O43294 461 aa17.2■□□□□ 0.34
LIM2-202ENST00000596399 CCDC192P0DO97 292 aa17.2■□□□□ 0.34
LIM2-202ENST00000596399 GRIK1P39086 918 aa17.2■□□□□ 0.34
LIM2-202ENST00000596399 CACNA2D1P54289 1103 aa17.2■□□□□ 0.34
LIM2-202ENST00000596399 ASIC1P78348 528 aa17.2■□□□□ 0.34
LIM2-202ENST00000596399 DUOXA2Q1HG44 320 aa17.2■□□□□ 0.34
LIM2-202ENST00000596399 PPM1JQ5JR12 505 aa17.2■□□□□ 0.34
LIM2-202ENST00000596399 TRAPPC11Q7Z392 1133 aa17.2■□□□□ 0.34
LIM2-202ENST00000596399 NELFCDQ8IXH7 590 aa17.2■□□□□ 0.34
LIM2-202ENST00000596399 CPA6Q8N4T0 437 aa17.2■□□□□ 0.34
LIM2-202ENST00000596399 INTS4Q96HW7 963 aaKnown RBP17.2■□□□□ 0.34
LIM2-202ENST00000596399 FUBP3Q96I24 572 aaKnown RBP eCLIP17.2■□□□□ 0.34
LIM2-202ENST00000596399 MMS19Q96T76 1030 aa17.2■□□□□ 0.34
LIM2-202ENST00000596399 TNMDQ9H2S6 317 aa17.2■□□□□ 0.34
LIM2-202ENST00000596399 ZSCAN16Q9H4T2 348 aaPredicted RBP17.2■□□□□ 0.34
LIM2-202ENST00000596399 TMEM30AQ9NV96 361 aa17.2■□□□□ 0.34
LIM2-202ENST00000596399 CDH9Q9ULB4 789 aa17.2■□□□□ 0.34
LIM2-202ENST00000596399 EML5Q05BV3 1969 aa17.2■□□□□ 0.34
LIM2-202ENST00000596399 GREB1Q4ZG55 1949 aa17.19■□□□□ 0.34
LIM2-202ENST00000596399 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.19■□□□□ 0.34
LIM2-202ENST00000596399 ATG13O75143 517 aa17.19■□□□□ 0.34
LIM2-202ENST00000596399 DLATP10515 647 aaKnown RBP17.19■□□□□ 0.34
LIM2-202ENST00000596399 HDCP19113 662 aa17.19■□□□□ 0.34
LIM2-202ENST00000596399 DRD1P21728 446 aa17.19■□□□□ 0.34
LIM2-202ENST00000596399 KCNA4P22459 653 aa17.19■□□□□ 0.34
LIM2-202ENST00000596399 MAGEA11P43364 429 aa17.19■□□□□ 0.34
LIM2-202ENST00000596399 RAP1GAPP47736 663 aa17.19■□□□□ 0.34
LIM2-202ENST00000596399 IFNAR2P48551 515 aa17.19■□□□□ 0.34
LIM2-202ENST00000596399 CYP2J2P51589 502 aa17.19■□□□□ 0.34
LIM2-202ENST00000596399 PSMD2Q13200 908 aa17.19■□□□□ 0.34
LIM2-202ENST00000596399 FOXD4L6Q3SYB3 417 aaPredicted RBP17.19■□□□□ 0.34
LIM2-202ENST00000596399 MDH1BQ5I0G3 518 aa17.19■□□□□ 0.34
LIM2-202ENST00000596399 SHC4Q6S5L8 630 aa17.19■□□□□ 0.34
LIM2-202ENST00000596399 FOXD4L3Q6VB84 417 aaPredicted RBP17.19■□□□□ 0.34
LIM2-202ENST00000596399 EPM2AIP1Q7L775 607 aaPredicted RBP17.19■□□□□ 0.34
LIM2-202ENST00000596399 DPH6Q7L8W6 267 aa17.19■□□□□ 0.34
LIM2-202ENST00000596399 CACNA2D4Q7Z3S7 1137 aa17.19■□□□□ 0.34
LIM2-202ENST00000596399 WDR49Q8IV35 697 aa17.19■□□□□ 0.34
LIM2-202ENST00000596399 SPATA18Q8TC71 538 aa17.19■□□□□ 0.34
LIM2-202ENST00000596399 CD101Q93033 1021 aa17.19■□□□□ 0.34
LIM2-202ENST00000596399 ELMO3Q96BJ8 720 aa17.19■□□□□ 0.34
LIM2-202ENST00000596399 CCDC127Q96BQ5 260 aa17.19■□□□□ 0.34
LIM2-202ENST00000596399 PCED1BQ96HM7 432 aa17.19■□□□□ 0.34
LIM2-202ENST00000596399 RNF38Q9H0F5 515 aa17.19■□□□□ 0.34
LIM2-202ENST00000596399 GZF1Q9H116 711 aaPredicted RBP17.19■□□□□ 0.34
LIM2-202ENST00000596399 DPEP3Q9H4B8 488 aa17.19■□□□□ 0.34
LIM2-202ENST00000596399 AGPAT3Q9NRZ7 376 aa17.19■□□□□ 0.34
LIM2-202ENST00000596399 R3HCC1Q9Y3T6 440 aaKnown RBP17.19■□□□□ 0.34
LIM2-202ENST00000596399 WARSP23381 471 aaKnown RBP17.18■□□□□ 0.34
LIM2-202ENST00000596399 KCNB1Q14721 858 aa17.18■□□□□ 0.34
LIM2-202ENST00000596399 SNRNP35Q16560 246 aaKnown RBP17.18■□□□□ 0.34
LIM2-202ENST00000596399 C4orf50Q6ZRC1 276 aa17.18■□□□□ 0.34
LIM2-202ENST00000596399 FSIP1Q8NA03 581 aa17.18■□□□□ 0.34
LIM2-202ENST00000596399 ZNF507Q8TCN5 953 aa17.18■□□□□ 0.34
LIM2-202ENST00000596399 ZNF516Q92618 1163 aa17.18■□□□□ 0.34
LIM2-202ENST00000596399 ATP2A3Q93084 1043 aa17.18■□□□□ 0.34
LIM2-202ENST00000596399 BLZF1Q9H2G9 400 aa17.18■□□□□ 0.34
LIM2-202ENST00000596399 INVSQ9Y283 1065 aa17.18■□□□□ 0.34
LIM2-202ENST00000596399 F8VP50 259 aa17.17■□□□□ 0.34
LIM2-202ENST00000596399 KIAA0391O15091 583 aaKnown RBP17.17■□□□□ 0.34
LIM2-202ENST00000596399 EPN2O95208 641 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms