RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 GCLMP48507 274 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 PMS1P54277 932 aaKnown RBP13.91□□□□□ -0.18
USE1-207ENST00000596136 FKBP3Q00688 224 aaKnown RBP13.91□□□□□ -0.18
USE1-207ENST00000596136 CYP27A1Q02318 531 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 MDH1BQ5I0G3 518 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 UNC93AQ86WB7 457 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 SCN4BQ8IWT1 228 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 CMTM8Q8IZV2 173 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 CRYBG2Q8N1P7 616 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 DTWD2Q8NBA8 298 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 PJA1Q8NG27 643 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 TAS1R2Q8TE23 839 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 DHTKD1Q96HY7 919 aaPredicted RBP13.91□□□□□ -0.18
USE1-207ENST00000596136 FAXDC2Q96IV6 333 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 NELL2Q99435 816 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 TTLL2Q9BWV7 592 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 B3GNT5Q9BYG0 378 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 BCO2Q9BYV7 579 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 BRD9Q9H8M2 597 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 TMEM30AQ9NV96 361 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 MAN1B1Q9UKM7 699 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 CACNA1IQ9P0X4 2223 aa13.91□□□□□ -0.18
USE1-207ENST00000596136 STK25O00506 426 aa13.9□□□□□ -0.18
USE1-207ENST00000596136 ZNF263O14978 683 aa13.9□□□□□ -0.18
USE1-207ENST00000596136 TRIM66O15016 1216 aa13.9□□□□□ -0.18
USE1-207ENST00000596136 PRAMEF12O95522 483 aa13.9□□□□□ -0.18
USE1-207ENST00000596136 GDI1P31150 447 aa13.9□□□□□ -0.18
USE1-207ENST00000596136 PIK3CAP42336 1068 aa13.9□□□□□ -0.18
USE1-207ENST00000596136 RAP1GAPP47736 663 aa13.9□□□□□ -0.18
USE1-207ENST00000596136 UBE2HP62256 183 aa13.9□□□□□ -0.18
USE1-207ENST00000596136 NOP14P78316 857 aaKnown RBP13.9□□□□□ -0.18
USE1-207ENST00000596136 INCA1Q0VD86 236 aa13.9□□□□□ -0.18
USE1-207ENST00000596136 MORC3Q14149 939 aa13.9□□□□□ -0.18
USE1-207ENST00000596136 ZNF268Q14587 947 aaPredicted RBP13.9□□□□□ -0.18
USE1-207ENST00000596136 KRT39Q6A163 491 aa13.9□□□□□ -0.18
USE1-207ENST00000596136 PAQR9Q6ZVX9 377 aa13.9□□□□□ -0.18
USE1-207ENST00000596136 ZNF687Q8N1G0 1237 aa13.9□□□□□ -0.18
USE1-207ENST00000596136 STKLD1Q8NE28 680 aa13.9□□□□□ -0.18
USE1-207ENST00000596136 MRPS31Q92665 395 aaKnown RBP13.9□□□□□ -0.18
USE1-207ENST00000596136 ELMO3Q96BJ8 720 aa13.9□□□□□ -0.18
USE1-207ENST00000596136 EEF2KMTQ96G04 330 aa13.9□□□□□ -0.18
USE1-207ENST00000596136 TNIP3Q96KP6 325 aa13.9□□□□□ -0.18
USE1-207ENST00000596136 TSG101Q99816 390 aa13.9□□□□□ -0.18
USE1-207ENST00000596136 ELOVL4Q9GZR5 314 aa13.9□□□□□ -0.18
USE1-207ENST00000596136 CYP3A43Q9HB55 503 aa13.9□□□□□ -0.18
USE1-207ENST00000596136 APOBEC3GQ9HC16 384 aaKnown RBP13.9□□□□□ -0.18
USE1-207ENST00000596136 HEBP1Q9NRV9 189 aa13.9□□□□□ -0.18
USE1-207ENST00000596136 MAGED2Q9UNF1 606 aaPredicted RBP13.9□□□□□ -0.18
USE1-207ENST00000596136 KIF26AQ9ULI4 1882 aaPredicted RBP13.9□□□□□ -0.18
USE1-207ENST00000596136 MIA3Q5JRA6 1907 aa13.9□□□□□ -0.18
USE1-207ENST00000596136 COL4A3Q01955 1670 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 PPP1R3GB7ZBB8 358 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 F8VP50 259 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 PSMA7O14818 248 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 STX10O60499 249 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 EPB41P11171 864 aaKnown RBP13.89□□□□□ -0.19
USE1-207ENST00000596136 CD44P16070 742 aaKnown RBP13.89□□□□□ -0.19
USE1-207ENST00000596136 PFKLP17858 780 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 HOXD11P31277 338 aaPredicted RBP13.89□□□□□ -0.19
USE1-207ENST00000596136 GRIK1P39086 918 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 CACNA2D1P54289 1103 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 FZD5Q13467 585 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 STIM1Q13586 685 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 ARHGAP29Q52LW3 1261 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 TXNDC8Q6A555 127 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 SPOPLQ6IQ16 392 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 SCARA5Q6ZMJ2 495 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 ZNF852Q6ZMS4 543 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 TPRG1Q6ZUI0 275 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 DENND5BQ6ZUT9 1274 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 CELF5Q8N6W0 485 aaKnown RBP13.89□□□□□ -0.19
USE1-207ENST00000596136 MAB21L3Q8N8X9 362 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 BPIFB1Q8TDL5 484 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 USP13Q92995 863 aaPredicted RBP13.89□□□□□ -0.19
USE1-207ENST00000596136 CLDN23Q96B33 292 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 FOXQ1Q9C009 403 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 ZNF518BQ9C0D4 1074 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 FAM124BQ9H5Z6 455 aaPredicted RBP13.89□□□□□ -0.19
USE1-207ENST00000596136 KIF9Q9HAQ2 790 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 LTB4R2Q9NPC1 389 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 TDP1Q9NUW8 608 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 EHD2Q9NZN4 543 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 COQ4Q9Y3A0 265 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 MTF2Q9Y483 593 aaPredicted RBP13.89□□□□□ -0.19
USE1-207ENST00000596136 TICRRQ7Z2Z1 1910 aa13.89□□□□□ -0.19
USE1-207ENST00000596136 TRIM49BA6NDI0 452 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 FAM170BA6NMN3 283 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 CLDN5O00501 218 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 MAN2B1O00754 1011 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 DPYSL4O14531 572 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 LRRN2O75325 713 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 DCNP07585 359 aaKnown RBP13.88□□□□□ -0.19
USE1-207ENST00000596136 RFX1P22670 979 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 ANXA13P27216 316 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 AVPR1AP37288 418 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 MAGEA9P43362 315 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 PPP3CCP48454 512 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 MXI1P50539 228 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 NDST1P52848 882 aa13.88□□□□□ -0.19
USE1-207ENST00000596136 USP46P62068 366 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms