RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 C2CD2Q9Y426 696 aa18.21■□□□□ 0.51
ARHGEF1-213ENST00000595897 SCN9AQ15858 1988 aa18.21■□□□□ 0.51
ARHGEF1-213ENST00000595897 MAP3K13O43283 966 aa18.21■□□□□ 0.51
ARHGEF1-213ENST00000595897 SEZ6Q53EL9 994 aa18.21■□□□□ 0.51
ARHGEF1-213ENST00000595897 ZBTB41Q5SVQ8 909 aa18.21■□□□□ 0.51
ARHGEF1-213ENST00000595897 DHRS4Q9BTZ2 278 aa18.21■□□□□ 0.51
ARHGEF1-213ENST00000595897 KCNK13Q9HB14 408 aa18.21■□□□□ 0.51
ARHGEF1-213ENST00000595897 PIDD1Q9HB75 910 aa18.21■□□□□ 0.51
ARHGEF1-213ENST00000595897 ZNF541Q9H0D2 1346 aa18.21■□□□□ 0.51
ARHGEF1-213ENST00000595897 LRRIQ4A6NIV6 560 aa18.21■□□□□ 0.5
ARHGEF1-213ENST00000595897 FCHO1O14526 889 aa18.21■□□□□ 0.5
ARHGEF1-213ENST00000595897 DLDP09622 509 aaKnown RBP18.21■□□□□ 0.5
ARHGEF1-213ENST00000595897 PYGBP11216 843 aa18.21■□□□□ 0.5
ARHGEF1-213ENST00000595897 KCNA3P22001 575 aa18.21■□□□□ 0.5
ARHGEF1-213ENST00000595897 PSMA2P25787 234 aa18.21■□□□□ 0.5
ARHGEF1-213ENST00000595897 ERFP50548 548 aa18.21■□□□□ 0.5
ARHGEF1-213ENST00000595897 SYCP2LQ5T4T6 812 aa18.21■□□□□ 0.5
ARHGEF1-213ENST00000595897 OXNAD1Q96HP4 312 aaPredicted RBP18.21■□□□□ 0.5
ARHGEF1-213ENST00000595897 FAM161BQ96MY7 647 aa18.21■□□□□ 0.5
ARHGEF1-213ENST00000595897 WDR83Q9BRX9 315 aaKnown RBP18.21■□□□□ 0.5
ARHGEF1-213ENST00000595897 CYP26B1Q9NR63 512 aa18.21■□□□□ 0.5
ARHGEF1-213ENST00000595897 PXMP2Q9NR77 195 aa18.21■□□□□ 0.5
ARHGEF1-213ENST00000595897 SIGLEC16A6NMB1 481 aa18.2■□□□□ 0.5
ARHGEF1-213ENST00000595897 STAM2O75886 525 aa18.2■□□□□ 0.5
ARHGEF1-213ENST00000595897 TMEM63AO94886 807 aa18.2■□□□□ 0.5
ARHGEF1-213ENST00000595897 ASNSP08243 561 aa18.2■□□□□ 0.5
ARHGEF1-213ENST00000595897 YWHAGP61981 247 aaKnown RBP eCLIP18.2■□□□□ 0.5
ARHGEF1-213ENST00000595897 GPAT2Q6NUI2 795 aa18.2■□□□□ 0.5
ARHGEF1-213ENST00000595897 FAM71DQ8N9W8 422 aa18.2■□□□□ 0.5
ARHGEF1-213ENST00000595897 SERAC1Q96JX3 654 aa18.2■□□□□ 0.5
ARHGEF1-213ENST00000595897 CPSF2Q9P2I0 782 aaKnown RBP18.2■□□□□ 0.5
ARHGEF1-213ENST00000595897 STX18Q9P2W9 335 aaKnown RBP18.2■□□□□ 0.5
ARHGEF1-213ENST00000595897 FAM237BA0A1B0GVD1 139 aa18.2■□□□□ 0.5
ARHGEF1-213ENST00000595897 DKC1O60832 514 aaKnown RBP eCLIP18.2■□□□□ 0.51e-6■■□□□ 12.2
ARHGEF1-213ENST00000595897 DNAJC6O75061 913 aa18.2■□□□□ 0.5
ARHGEF1-213ENST00000595897 PTPN7P35236 360 aa18.2■□□□□ 0.5
ARHGEF1-213ENST00000595897 PRKCEQ02156 737 aa18.2■□□□□ 0.5
ARHGEF1-213ENST00000595897 PRKD1Q15139 912 aaPredicted RBP18.2■□□□□ 0.5
ARHGEF1-213ENST00000595897 TTC13Q8NBP0 860 aa18.2■□□□□ 0.5
ARHGEF1-213ENST00000595897 TMEM143Q96AN5 459 aa18.2■□□□□ 0.5
ARHGEF1-213ENST00000595897 APOPT1Q96IL0 206 aa18.2■□□□□ 0.5
ARHGEF1-213ENST00000595897 GJD4Q96KN9 370 aaPredicted RBP18.2■□□□□ 0.5
ARHGEF1-213ENST00000595897 NMUR2Q9GZQ4 415 aa18.2■□□□□ 0.5
ARHGEF1-213ENST00000595897 SLC9A2Q9UBY0 812 aa18.2■□□□□ 0.5
ARHGEF1-213ENST00000595897 B2RBV5 119 aa18.19■□□□□ 0.5
ARHGEF1-213ENST00000595897 H3BRJ5 948 aa18.19■□□□□ 0.5
ARHGEF1-213ENST00000595897 K7ERI5 159 aa18.19■□□□□ 0.5
ARHGEF1-213ENST00000595897 TGDSO95455 350 aa18.19■□□□□ 0.5
ARHGEF1-213ENST00000595897 ZNF200P98182 395 aaPredicted RBP18.19■□□□□ 0.5
ARHGEF1-213ENST00000595897 FAAP100Q0VG06 881 aa18.19■□□□□ 0.5
ARHGEF1-213ENST00000595897 KBTBD12Q3ZCT8 623 aa18.19■□□□□ 0.5
ARHGEF1-213ENST00000595897 SEPT12Q8IYM1 358 aa18.19■□□□□ 0.5
ARHGEF1-213ENST00000595897 RDM1Q8NG50 284 aa18.19■□□□□ 0.5
ARHGEF1-213ENST00000595897 TARS2Q9BW92 718 aaKnown RBP18.19■□□□□ 0.5
ARHGEF1-213ENST00000595897 SNUPNO95149 360 aaKnown RBP18.19■□□□□ 0.5
ARHGEF1-213ENST00000595897 RXRBP28702 533 aa18.19■□□□□ 0.5
ARHGEF1-213ENST00000595897 ELK3P41970 407 aa18.19■□□□□ 0.5
ARHGEF1-213ENST00000595897 POLE2P56282 527 aa18.19■□□□□ 0.5
ARHGEF1-213ENST00000595897 KRT72Q14CN4 511 aa18.19■□□□□ 0.5
ARHGEF1-213ENST00000595897 ALYREFQ86V81 257 aaKnown RBP18.19■□□□□ 0.5
ARHGEF1-213ENST00000595897 CTAGE3PQ8IX95 158 aa18.19■□□□□ 0.5
ARHGEF1-213ENST00000595897 DEPTORQ8TB45 409 aa18.19■□□□□ 0.5
ARHGEF1-213ENST00000595897 MMADHCQ9H3L0 296 aaPredicted RBP18.19■□□□□ 0.5
ARHGEF1-213ENST00000595897 CNTN6Q9UQ52 1028 aa18.19■□□□□ 0.5
ARHGEF1-213ENST00000595897 ASB3Q9Y575 518 aa18.19■□□□□ 0.5
ARHGEF1-213ENST00000595897 COL2A1P02458 1487 aaPredicted RBP18.19■□□□□ 0.5
ARHGEF1-213ENST00000595897 PSAPP07602 524 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 RARBP10826 455 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 SERPINB4P48594 390 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 RTP1P59025 263 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 TAP1Q03518 808 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 AP1B1Q10567 949 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 DGKZQ13574 1117 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 CHSY1Q86X52 802 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 UNC45BQ8IWX7 931 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 CFAP61Q8NHU2 1237 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 CCDC110Q8TBZ0 833 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 CGRRF1Q99675 332 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 TCRBV9S1A1TA0A576 114 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 I3L4J1 428 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 COPEO14579 308 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 LSM8O95777 96 aaKnown RBP18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 ENO1P06733 434 aaKnown RBP18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 CACNA2D1P54289 1103 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 HADHQ16836 314 aaKnown RBP18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 MDH1BQ5I0G3 518 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 SCARA3Q6AZY7 606 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 SLFN12LQ6IEE8 588 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 RFX6Q8HWS3 928 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 PHACTR1Q9C0D0 580 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 HAPLN2Q9GZV7 340 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 ZNF212Q9UDV6 495 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 FBXO40Q9UH90 709 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 TELO2Q9Y4R8 837 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 WASF2Q9Y6W5 498 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 E7ESA3 106 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 H0YIN7 160 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 AP1G2O75843 785 aa18.18■□□□□ 0.5
ARHGEF1-213ENST00000595897 KRT7P08729 469 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms