RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 TPD52L1Q16890 204 aaPredicted RBP13.81□□□□□ -0.2
SCAF1-202ENST00000595242 FILIP1LQ4L180 1135 aa13.81□□□□□ -0.2
SCAF1-202ENST00000595242 TCP11X2Q5H9J9 407 aa13.81□□□□□ -0.2
SCAF1-202ENST00000595242 RNF19BQ6ZMZ0 732 aa13.81□□□□□ -0.2
SCAF1-202ENST00000595242 TMC8Q8IU68 726 aa13.81□□□□□ -0.2
SCAF1-202ENST00000595242 IRF2BP1Q8IU81 584 aa13.81□□□□□ -0.2
SCAF1-202ENST00000595242 BPIFB1Q8TDL5 484 aa13.81□□□□□ -0.2
SCAF1-202ENST00000595242 OBP2AQ9NY56 170 aa13.81□□□□□ -0.2
SCAF1-202ENST00000595242 EBF1Q9UH73 591 aa13.81□□□□□ -0.2
SCAF1-202ENST00000595242 INVSQ9Y283 1065 aa13.81□□□□□ -0.2
SCAF1-202ENST00000595242 SMIM28A0A1B0GU29 152 aa13.8□□□□□ -0.2
SCAF1-202ENST00000595242 KCNJ18B7U540 433 aa13.8□□□□□ -0.2
SCAF1-202ENST00000595242 TRDMT1O14717 391 aaKnown RBP13.8□□□□□ -0.2
SCAF1-202ENST00000595242 APBB3O95704 486 aa13.8□□□□□ -0.2
SCAF1-202ENST00000595242 EGFP01133 1207 aa13.8□□□□□ -0.2
SCAF1-202ENST00000595242 SPATA31C1P0DKV0 1188 aa13.8□□□□□ -0.2
SCAF1-202ENST00000595242 CPB1P15086 417 aa13.8□□□□□ -0.2
SCAF1-202ENST00000595242 COPB1P53618 953 aaKnown RBP13.8□□□□□ -0.2
SCAF1-202ENST00000595242 PMS1P54277 932 aaKnown RBP13.8□□□□□ -0.2
SCAF1-202ENST00000595242 KCNJ12Q14500 433 aa13.8□□□□□ -0.2
SCAF1-202ENST00000595242 KRT31Q15323 416 aa13.8□□□□□ -0.2
SCAF1-202ENST00000595242 PMS2CLQ68D20 193 aa13.8□□□□□ -0.2
SCAF1-202ENST00000595242 CDCA2Q69YH5 1023 aaPredicted RBP13.8□□□□□ -0.2
SCAF1-202ENST00000595242 CENPPQ6IPU0 288 aa13.8□□□□□ -0.2
SCAF1-202ENST00000595242 MAEAQ7L5Y9 396 aa13.8□□□□□ -0.2
SCAF1-202ENST00000595242 ZBTB8OSQ8IWT0 167 aa13.8□□□□□ -0.2
SCAF1-202ENST00000595242 C17orf53Q8N3J3 647 aaPredicted RBP13.8□□□□□ -0.2
SCAF1-202ENST00000595242 ANKRD20A12PQ8NF67 263 aa13.8□□□□□ -0.2
SCAF1-202ENST00000595242 DDX12PQ92771 950 aa13.8□□□□□ -0.2
SCAF1-202ENST00000595242 CCDC43Q96MW1 224 aaKnown RBP13.8□□□□□ -0.2
SCAF1-202ENST00000595242 DUSP9Q99956 384 aaKnown RBP13.8□□□□□ -0.2
SCAF1-202ENST00000595242 TUFT1Q9NNX1 390 aa13.8□□□□□ -0.2
SCAF1-202ENST00000595242 GPRC5CQ9NQ84 441 aa13.8□□□□□ -0.2
SCAF1-202ENST00000595242 ANKEF1Q9NU02 776 aa13.8□□□□□ -0.2
SCAF1-202ENST00000595242 YIPF1Q9Y548 306 aa13.8□□□□□ -0.2
SCAF1-202ENST00000595242 TRIM49BA6NDI0 452 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 H0Y626 953 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 PODXLO00592 558 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 TRIM16O95361 564 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 PRAMEF12O95522 483 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 PLA2G4BP0C869 781 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 CYP11B2P19099 503 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 FECHP22830 423 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 RDXP35241 583 aaKnown RBP13.79□□□□□ -0.2
SCAF1-202ENST00000595242 RARRES1P49788 294 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 EPHB3P54753 998 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 SLC12A3P55017 1021 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 SCAPQ12770 1279 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 LMAN2Q12907 356 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 MAPK6Q16659 721 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 GPR158Q5T848 1215 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 EEF1DP3Q658K8 133 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 ZNF280DQ6N043 979 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 GAREM2Q75VX8 874 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 SYT13Q7L8C5 426 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 CYP2U1Q7Z449 544 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 CATSPER3Q86XQ3 398 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 TMEM139Q8IV31 216 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 CHCHD4Q8N4Q1 142 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 CHFRQ96EP1 664 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 ATXN3LQ9H3M9 355 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 THG1LQ9NWX6 298 aaKnown RBP13.79□□□□□ -0.2
SCAF1-202ENST00000595242 KIAA1024Q9UPX6 916 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 NUB1Q9Y5A7 615 aa13.79□□□□□ -0.2
SCAF1-202ENST00000595242 PLXND1Q9Y4D7 1925 aa13.78□□□□□ -0.2
SCAF1-202ENST00000595242 A0A1W2PQC6 194 aa13.78□□□□□ -0.2
SCAF1-202ENST00000595242 E9PMD0 336 aa13.78□□□□□ -0.2
SCAF1-202ENST00000595242 ACKR2O00590 384 aa13.78□□□□□ -0.2
SCAF1-202ENST00000595242 TEX33O43247 280 aa13.78□□□□□ -0.2
SCAF1-202ENST00000595242 USO1O60763 962 aaKnown RBP13.78□□□□□ -0.2
SCAF1-202ENST00000595242 LYPLA2O95372 231 aa13.78□□□□□ -0.2
SCAF1-202ENST00000595242 EDN1P05305 212 aa13.78□□□□□ -0.2
SCAF1-202ENST00000595242 MAPK8P45983 427 aa13.78□□□□□ -0.2
SCAF1-202ENST00000595242 DGKEP52429 567 aa13.78□□□□□ -0.2
SCAF1-202ENST00000595242 LRRC63Q05C16 580 aa13.78□□□□□ -0.2
SCAF1-202ENST00000595242 PLD1Q13393 1074 aa13.78□□□□□ -0.2
SCAF1-202ENST00000595242 TRIM14Q14142 442 aa13.78□□□□□ -0.2
SCAF1-202ENST00000595242 DCAF4L1Q3SXM0 396 aa13.78□□□□□ -0.2
SCAF1-202ENST00000595242 USP39Q53GS9 565 aaKnown RBP13.78□□□□□ -0.2
SCAF1-202ENST00000595242 HSP90AA4PQ58FG1 418 aa13.78□□□□□ -0.2
SCAF1-202ENST00000595242 C11orf74Q86VG3 221 aa13.78□□□□□ -0.2
SCAF1-202ENST00000595242 FAM114A1Q8IWE2 563 aa13.78□□□□□ -0.2
SCAF1-202ENST00000595242 SYT2Q8N9I0 419 aaPredicted RBP13.78□□□□□ -0.2
SCAF1-202ENST00000595242 TC2NQ8N9U0 490 aa13.78□□□□□ -0.2
SCAF1-202ENST00000595242 RPLP0P6Q8NHW5 317 aa13.78□□□□□ -0.2
SCAF1-202ENST00000595242 HNRNPLLQ8WVV9 542 aaKnown RBP13.78□□□□□ -0.2
SCAF1-202ENST00000595242 PIGKQ92643 395 aa13.78□□□□□ -0.2
SCAF1-202ENST00000595242 HSD17B14Q9BPX1 270 aa13.78□□□□□ -0.2
SCAF1-202ENST00000595242 EIF2AK1Q9BQI3 630 aaKnown RBP13.78□□□□□ -0.2
SCAF1-202ENST00000595242 C2orf40Q9H1Z8 148 aa13.78□□□□□ -0.2
SCAF1-202ENST00000595242 FBRSL1Q9HCM7 1045 aaKnown RBP13.78□□□□□ -0.2
SCAF1-202ENST00000595242 GKN1Q9NS71 199 aa13.78□□□□□ -0.2
SCAF1-202ENST00000595242 SLC38A7Q9NVC3 462 aa13.78□□□□□ -0.2
SCAF1-202ENST00000595242 OTOL1A6NHN0 477 aaPredicted RBP13.77□□□□□ -0.21
SCAF1-202ENST00000595242 LGALS16A8MUM7 142 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 VNN2O95498 520 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 DRD1P21728 446 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 DHPSP49366 369 aaPredicted RBP13.77□□□□□ -0.21
SCAF1-202ENST00000595242 RUNX3Q13761 415 aa13.77□□□□□ -0.21
SCAF1-202ENST00000595242 DMC1Q14565 340 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms