RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 FUKQ8N0W3 1084 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 SLC44A3Q8N4M1 653 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 TTC39CQ8N584 583 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 C12orf29Q8N999 325 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 LMO3Q8TAP4 145 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 WHAMMQ8TF30 809 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 TRMT2BQ96GJ1 504 aaKnown RBP15.48■□□□□ 0.07
VRK3-206ENST00000594090 SMARCD1Q96GM5 515 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 C8orf48Q96LL4 319 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 MYRFLQ96LU7 910 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 CEP295NLQ96MC4 621 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 NT5C1BQ96P26 610 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 GCNAQ96QF7 691 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 KXD1Q9BQD3 176 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 MED10Q9BTT4 135 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 RPP25Q9BUL9 199 aaKnown RBP15.48■□□□□ 0.07
VRK3-206ENST00000594090 SLITRK6Q9H5Y7 841 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 FAM124BQ9H5Z6 455 aaPredicted RBP15.48■□□□□ 0.07
VRK3-206ENST00000594090 CISHQ9NSE2 258 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 TMEM30AQ9NV96 361 aa15.48■□□□□ 0.07
VRK3-206ENST00000594090 CUL9Q8IWT3 2517 aa15.47■□□□□ 0.07
VRK3-206ENST00000594090 DENND4CQ5VZ89 1909 aa15.47■□□□□ 0.07
VRK3-206ENST00000594090 NUP210Q8TEM1 1887 aaPredicted RBP15.47■□□□□ 0.07
VRK3-206ENST00000594090 BDP1A6H8Y1 2624 aa15.47■□□□□ 0.07
VRK3-206ENST00000594090 NARSO43776 548 aaKnown RBP15.47■□□□□ 0.07
VRK3-206ENST00000594090 TADA3O75528 432 aa15.47■□□□□ 0.07
VRK3-206ENST00000594090 FCARP24071 287 aa15.47■□□□□ 0.07
VRK3-206ENST00000594090 CYP4F8P98187 520 aa15.47■□□□□ 0.07
VRK3-206ENST00000594090 LRMPQ12912 555 aa15.47■□□□□ 0.07
VRK3-206ENST00000594090 ARHGAP15Q53QZ3 475 aa15.47■□□□□ 0.07
VRK3-206ENST00000594090 FAM78AQ5JUQ0 283 aa15.47■□□□□ 0.07
VRK3-206ENST00000594090 GPR158Q5T848 1215 aa15.47■□□□□ 0.07
VRK3-206ENST00000594090 TRIM67Q6ZTA4 783 aa15.47■□□□□ 0.07
VRK3-206ENST00000594090 TMEM150AQ86TG1 271 aa15.47■□□□□ 0.07
VRK3-206ENST00000594090 FAM114A1Q8IWE2 563 aa15.47■□□□□ 0.07
VRK3-206ENST00000594090 ZSCAN18Q8TBC5 510 aaPredicted RBP15.47■□□□□ 0.07
VRK3-206ENST00000594090 GPR88Q9GZN0 384 aa15.47■□□□□ 0.07
VRK3-206ENST00000594090 KRT82Q9NSB4 513 aa15.47■□□□□ 0.07
VRK3-206ENST00000594090 FAM49BQ9NUQ9 324 aa15.47■□□□□ 0.07
VRK3-206ENST00000594090 ANO10Q9NW15 660 aa15.47■□□□□ 0.07
VRK3-206ENST00000594090 PATJQ8NI35 1801 aa15.46■□□□□ 0.07
VRK3-206ENST00000594090 GPR37L1O60883 481 aa15.46■□□□□ 0.07
VRK3-206ENST00000594090 ECI2O75521 394 aa15.46■□□□□ 0.07
VRK3-206ENST00000594090 AP1G2O75843 785 aa15.46■□□□□ 0.07
VRK3-206ENST00000594090 F11P03951 625 aa15.46■□□□□ 0.07
VRK3-206ENST00000594090 TBXAS1P24557 533 aaPredicted RBP15.46■□□□□ 0.07
VRK3-206ENST00000594090 MTIF2P46199 727 aaKnown RBP15.46■□□□□ 0.07
VRK3-206ENST00000594090 STX1AQ16623 288 aa15.46■□□□□ 0.07
VRK3-206ENST00000594090 ZNF394Q53GI3 561 aa15.46■□□□□ 0.07
VRK3-206ENST00000594090 TMEM31Q5JXX7 168 aa15.46■□□□□ 0.07
VRK3-206ENST00000594090 TANGO2Q6ICL3 276 aa15.46■□□□□ 0.07
VRK3-206ENST00000594090 DENND5BQ6ZUT9 1274 aa15.46■□□□□ 0.07
VRK3-206ENST00000594090 SLC2A14Q8TDB8 520 aa15.46■□□□□ 0.07
VRK3-206ENST00000594090 SMARCD2Q92925 531 aa15.46■□□□□ 0.07
VRK3-206ENST00000594090 ELSPBP1Q96BH3 223 aa15.46■□□□□ 0.07
VRK3-206ENST00000594090 DNAI2Q9GZS0 605 aa15.46■□□□□ 0.07
VRK3-206ENST00000594090 DMAP1Q9NPF5 467 aaPredicted RBP15.46■□□□□ 0.07
VRK3-206ENST00000594090 GCNT4Q9P109 453 aa15.46■□□□□ 0.07
VRK3-206ENST00000594090 TMEM221A6NGB7 291 aa15.45■□□□□ 0.06
VRK3-206ENST00000594090 M0R296 226 aa15.45■□□□□ 0.06
VRK3-206ENST00000594090 SRFP11831 508 aa15.45■□□□□ 0.06
VRK3-206ENST00000594090 ADORA2BP29275 332 aa15.45■□□□□ 0.06
VRK3-206ENST00000594090 RAD23BP54727 409 aa15.45■□□□□ 0.06
VRK3-206ENST00000594090 USP46P62068 366 aa15.45■□□□□ 0.06
VRK3-206ENST00000594090 YWHAEP62258 255 aaKnown RBP15.45■□□□□ 0.06
VRK3-206ENST00000594090 MAN2A1Q16706 1144 aa15.45■□□□□ 0.06
VRK3-206ENST00000594090 CAVIN1Q6NZI2 390 aaKnown RBP15.45■□□□□ 0.06
VRK3-206ENST00000594090 C11orf57Q6ZUT1 292 aaPredicted RBP15.45■□□□□ 0.06
VRK3-206ENST00000594090 PPM1KQ8N3J5 372 aa15.45■□□□□ 0.06
VRK3-206ENST00000594090 UBR7Q8N806 425 aa15.45■□□□□ 0.06
VRK3-206ENST00000594090 SLC4A11Q8NBS3 891 aa15.45■□□□□ 0.06
VRK3-206ENST00000594090 ENOX1Q8TC92 643 aaKnown RBP15.45■□□□□ 0.06
VRK3-206ENST00000594090 CYFIP2Q96F07 1278 aa15.45■□□□□ 0.06
VRK3-206ENST00000594090 ASIC4Q96FT7 647 aa15.45■□□□□ 0.06
VRK3-206ENST00000594090 KCNK16Q96T55 309 aa15.45■□□□□ 0.06
VRK3-206ENST00000594090 HNRNPABQ99729 332 aaKnown RBP15.45■□□□□ 0.06
VRK3-206ENST00000594090 TTLL2Q9BWV7 592 aa15.45■□□□□ 0.06
VRK3-206ENST00000594090 INTS2Q9H0H0 1204 aaKnown RBP15.45■□□□□ 0.06
VRK3-206ENST00000594090 TASP1Q9H6P5 420 aa15.45■□□□□ 0.06
VRK3-206ENST00000594090 TRPV4Q9HBA0 871 aa15.45■□□□□ 0.06
VRK3-206ENST00000594090 ZFP14Q9HCL3 533 aa15.45■□□□□ 0.06
VRK3-206ENST00000594090 NCANO14594 1321 aa15.45■□□□□ 0.06
VRK3-206ENST00000594090 PRR33A8MZF0 331 aa15.44■□□□□ 0.06
VRK3-206ENST00000594090 FAM200BP0CF97 657 aa15.44■□□□□ 0.06
VRK3-206ENST00000594090 DDX6P26196 483 aaKnown RBP eCLIP15.44■□□□□ 0.06
VRK3-206ENST00000594090 HSP90AA4PQ58FG1 418 aa15.44■□□□□ 0.06
VRK3-206ENST00000594090 ARHGEF19Q8IW93 802 aa15.44■□□□□ 0.06
VRK3-206ENST00000594090 EHBP1Q8NDI1 1231 aa15.44■□□□□ 0.06
VRK3-206ENST00000594090 ZMIZ2Q8NF64 920 aa15.44■□□□□ 0.06
VRK3-206ENST00000594090 MRPS31Q92665 395 aaKnown RBP15.44■□□□□ 0.06
VRK3-206ENST00000594090 TMEM176AQ96HP8 235 aa15.44■□□□□ 0.06
VRK3-206ENST00000594090 PLA2G2FQ9BZM2 168 aa15.44■□□□□ 0.06
VRK3-206ENST00000594090 CSNK1G1Q9HCP0 422 aa15.44■□□□□ 0.06
VRK3-206ENST00000594090 SAMSN1Q9NSI8 373 aaKnown RBP15.44■□□□□ 0.06
VRK3-206ENST00000594090 EHD2Q9NZN4 543 aa15.44■□□□□ 0.06
VRK3-206ENST00000594090 ZMYM5Q9UJ78 669 aa15.44■□□□□ 0.06
VRK3-206ENST00000594090 NFE2L3Q9Y4A8 694 aa15.44■□□□□ 0.06
VRK3-206ENST00000594090 TRIOO75962 3097 aa15.44■□□□□ 0.06
VRK3-206ENST00000594090 TECTAO75443 2155 aa15.44■□□□□ 0.06
VRK3-206ENST00000594090 BEST1O76090 585 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 198.9 ms