RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 PKMYT1Q99640 499 aa21.94■■□□□ 1.1
PNKP-203ENST00000593946 DUSP16Q9BY84 665 aa21.94■■□□□ 1.1
PNKP-203ENST00000593946 B3GNT5Q9BYG0 378 aa21.94■■□□□ 1.1
PNKP-203ENST00000593946 RC3H2Q9HBD1 1191 aaKnown RBP21.94■■□□□ 1.1
PNKP-203ENST00000593946 CYLDQ9NQC7 956 aa21.94■■□□□ 1.1
PNKP-203ENST00000593946 SIGLEC16A6NMB1 481 aa21.94■■□□□ 1.1
PNKP-203ENST00000593946 CLDN5O00501 218 aa21.94■■□□□ 1.1
PNKP-203ENST00000593946 ZNF185O15231 689 aa21.94■■□□□ 1.1
PNKP-203ENST00000593946 OAZ2O95190 189 aa21.94■■□□□ 1.1
PNKP-203ENST00000593946 COMTP21964 271 aa21.94■■□□□ 1.1
PNKP-203ENST00000593946 CXCR5P32302 372 aa21.94■■□□□ 1.1
PNKP-203ENST00000593946 PLA2G4AP47712 749 aa21.94■■□□□ 1.1
PNKP-203ENST00000593946 RGS7P49802 495 aa21.94■■□□□ 1.1
PNKP-203ENST00000593946 TERF1P54274 439 aa21.94■■□□□ 1.1
PNKP-203ENST00000593946 THEM5Q8N1Q8 247 aa21.94■■□□□ 1.1
PNKP-203ENST00000593946 ZNF689Q96CS4 500 aaPredicted RBP21.94■■□□□ 1.1
PNKP-203ENST00000593946 MCEEQ96PE7 176 aa21.94■■□□□ 1.1
PNKP-203ENST00000593946 CARD6Q9BX69 1037 aa21.94■■□□□ 1.1
PNKP-203ENST00000593946 PATJQ8NI35 1801 aa21.93■■□□□ 1.1
PNKP-203ENST00000593946 XPO1O14980 1071 aaKnown RBP21.93■■□□□ 1.1
PNKP-203ENST00000593946 GABBR2O75899 941 aa21.93■■□□□ 1.1
PNKP-203ENST00000593946 NPR3P17342 541 aa21.93■■□□□ 1.1
PNKP-203ENST00000593946 FAM35AQ86V20 835 aa21.93■■□□□ 1.1
PNKP-203ENST00000593946 CD101Q93033 1021 aa21.93■■□□□ 1.1
PNKP-203ENST00000593946 SELENOOQ9BVL4 669 aa21.93■■□□□ 1.1
PNKP-203ENST00000593946 CWH43Q9H720 699 aa21.93■■□□□ 1.1
PNKP-203ENST00000593946 PRKAG2Q9UGJ0 569 aa21.93■■□□□ 1.1
PNKP-203ENST00000593946 KIAA1671Q9BY89 1806 aa21.93■■□□□ 1.1
PNKP-203ENST00000593946 MIF4GDA9UHW6 222 aaKnown RBP21.92■■□□□ 1.1
PNKP-203ENST00000593946 GOLGA8SH3BPF8 625 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 DDX3YO15523 660 aaKnown RBP21.92■■□□□ 1.1
PNKP-203ENST00000593946 PROSCO94903 275 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 DNA2P51530 1060 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 BCAR1P56945 870 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 SNX16P57768 344 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 DCUN1D2Q6PH85 259 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 CLEC20AQ6ZU45 233 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 C16orf59Q7L2K0 433 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 CPNE8Q86YQ8 564 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 CREG2Q8IUH2 290 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 HSFY1Q96LI6 401 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 MED10Q9BTT4 135 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 GPR62Q9BZJ7 368 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 LCMT1Q9UIC8 334 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 SF3B1O75533 1304 aaKnown RBP eCLIP21.92■■□□□ 1.17e-7■■■■■ 86
PNKP-203ENST00000593946 CES2O00748 559 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 FAM200BP0CF97 657 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 KRT3P12035 628 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 MAN1A1P33908 653 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 PBX3P40426 434 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 SLC8A3P57103 927 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 PPIGQ13427 754 aaKnown RBP eCLIP21.92■■□□□ 1.15e-7■■■■□ 22.6
PNKP-203ENST00000593946 FUT10Q6P4F1 479 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 FAM183BPQ6ZVS7 135 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 TMEM173Q86WV6 379 aaPredicted RBP21.92■■□□□ 1.1
PNKP-203ENST00000593946 LRRN4CLQ8ND94 238 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 CAPZA3Q96KX2 299 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 TMEM209Q96SK2 561 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 KRT82Q9NSB4 513 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 IP6K2Q9UHH9 426 aa21.92■■□□□ 1.1
PNKP-203ENST00000593946 NT5C1B-RDH14C9J2C7 533 aa21.91■■□□□ 1.1
PNKP-203ENST00000593946 PIK3R2O00459 728 aa21.91■■□□□ 1.1
PNKP-203ENST00000593946 KCNK3O14649 394 aa21.91■■□□□ 1.1
PNKP-203ENST00000593946 SPOPO43791 374 aa21.91■■□□□ 1.1
PNKP-203ENST00000593946 FGFR3P22607 806 aa21.91■■□□□ 1.1
PNKP-203ENST00000593946 GTF2F1P35269 517 aaKnown RBP eCLIP21.91■■□□□ 1.17e-8■■■□□ 17.9
PNKP-203ENST00000593946 SLC1A1P43005 524 aa21.91■■□□□ 1.1
PNKP-203ENST00000593946 TSPY1Q01534 308 aa21.91■■□□□ 1.1
PNKP-203ENST00000593946 ZNF252P-AS1Q0IIN9 211 aa21.91■■□□□ 1.1
PNKP-203ENST00000593946 ELAVL2Q12926 359 aaKnown RBP21.91■■□□□ 1.1
PNKP-203ENST00000593946 MAPRE1Q15691 268 aaKnown RBP21.91■■□□□ 1.1
PNKP-203ENST00000593946 OLFML1Q6UWY5 402 aa21.91■■□□□ 1.1
PNKP-203ENST00000593946 TMCO2Q7Z6W1 182 aaPredicted RBP21.91■■□□□ 1.1
PNKP-203ENST00000593946 LRRTM3Q86VH5 581 aa21.91■■□□□ 1.1
PNKP-203ENST00000593946 CEP112Q8N8E3 955 aa21.91■■□□□ 1.1
PNKP-203ENST00000593946 MYLPFQ96A32 169 aa21.91■■□□□ 1.1
PNKP-203ENST00000593946 METTL5Q9NRN9 209 aaKnown RBP21.91■■□□□ 1.1
PNKP-203ENST00000593946 PAPSS1O43252 624 aaPredicted RBP21.9■■□□□ 1.1
PNKP-203ENST00000593946 BEST1O76090 585 aa21.9■■□□□ 1.1
PNKP-203ENST00000593946 CTNNA1P35221 906 aaKnown RBP21.9■■□□□ 1.1
PNKP-203ENST00000593946 RFC1P35251 1148 aaPredicted RBP21.9■■□□□ 1.1
PNKP-203ENST00000593946 ACADSBP45954 432 aa21.9■■□□□ 1.1
PNKP-203ENST00000593946 OGDHQ02218 1023 aa21.9■■□□□ 1.1
PNKP-203ENST00000593946 MRPL58Q14197 206 aaKnown RBP21.9■■□□□ 1.1
PNKP-203ENST00000593946 VARS2Q5ST30 1063 aaKnown RBP21.9■■□□□ 1.1
PNKP-203ENST00000593946 FAM102AQ5T9C2 384 aaPredicted RBP21.9■■□□□ 1.1
PNKP-203ENST00000593946 FAM171A1Q5VUB5 890 aa21.9■■□□□ 1.1
PNKP-203ENST00000593946 OR6B2Q6IFH4 312 aa21.9■■□□□ 1.1
PNKP-203ENST00000593946 OTOP2Q7RTS6 562 aa21.9■■□□□ 1.1
PNKP-203ENST00000593946 PIGZQ86VD9 579 aa21.9■■□□□ 1.1
PNKP-203ENST00000593946 ZDHHC17Q8IUH5 632 aa21.9■■□□□ 1.1
PNKP-203ENST00000593946 MNS1Q8NEH6 495 aa21.9■■□□□ 1.1
PNKP-203ENST00000593946 JOSD2Q8TAC2 188 aa21.9■■□□□ 1.1
PNKP-203ENST00000593946 FNIP1Q8TF40 1166 aa21.9■■□□□ 1.1
PNKP-203ENST00000593946 BCL7CQ8WUZ0 217 aaPredicted RBP21.9■■□□□ 1.1
PNKP-203ENST00000593946 BADQ92934 168 aa21.9■■□□□ 1.1
PNKP-203ENST00000593946 SMARCD1Q96GM5 515 aa21.9■■□□□ 1.1
PNKP-203ENST00000593946 TMLHEQ9NVH6 421 aa21.9■■□□□ 1.1
PNKP-203ENST00000593946 AP1G2O75843 785 aa21.89■■□□□ 1.1
PNKP-203ENST00000593946 EFEMP2O95967 443 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms