RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 BEST1O76090 585 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 CSH1P0DML2 217 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 CSH2P0DML3 217 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 CCDC130P13994 396 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 ACO1P21399 889 aaKnown RBP16.28■□□□□ 0.2
TRIM47-206ENST00000592942 GABRR2P28476 465 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 GRIK1P39086 918 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 USP46P62068 366 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 ZXDAP98168 799 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 VEPH1Q14D04 833 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 NCAPHQ15003 741 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 TPD52L1Q16890 204 aaPredicted RBP16.28■□□□□ 0.2
TRIM47-206ENST00000592942 MIIPQ5JXC2 388 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 STXBP5Q5T5C0 1151 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 PHLDB3Q6NSJ2 640 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 DPY19L2P1Q6NXN4 242 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 ARHGEF19Q8IW93 802 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 SLC4A11Q8NBS3 891 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 ZMIZ2Q8NF64 920 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 EDAQ92838 391 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 NXPE3Q969Y0 559 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 KCNK16Q96T55 309 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 HNRNPABQ99729 332 aaKnown RBP16.28■□□□□ 0.2
TRIM47-206ENST00000592942 FUCA2Q9BTY2 467 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 PLA2G2FQ9BZM2 168 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 FAM124BQ9H5Z6 455 aaPredicted RBP16.28■□□□□ 0.2
TRIM47-206ENST00000592942 IGSF9Q9P2J2 1179 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 NFE2L3Q9Y4A8 694 aa16.28■□□□□ 0.2
TRIM47-206ENST00000592942 RNF225M0QZC1 329 aaPredicted RBP16.27■□□□□ 0.2
TRIM47-206ENST00000592942 TNFRSF10BO14763 440 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 TADA3O75528 432 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 ALADP13716 330 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 SLC9A1P19634 815 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 FCARP24071 287 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 TYRO3Q06418 890 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 STX1AQ16623 288 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 ZNF394Q53GI3 561 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 FAM78AQ5JUQ0 283 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 CDKAL1Q5VV42 579 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 TANGO2Q6ICL3 276 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 FAM35AQ86V20 835 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 SLC2A14Q8TDB8 520 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 CYFIP2Q96F07 1278 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 TRMT2BQ96GJ1 504 aaKnown RBP16.27■□□□□ 0.2
TRIM47-206ENST00000592942 TMEM176AQ96HP8 235 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 CEP295NLQ96MC4 621 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 KREMEN1Q96MU8 473 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 ASB16Q96NS5 453 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 NT5C1BQ96P26 610 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 SMOQ99835 787 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 HSD3B7Q9H2F3 369 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 CSNK1G1Q9HCP0 422 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 SORCS3Q9UPU3 1222 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 NUMBLQ9Y6R0 609 aa16.27■□□□□ 0.2
TRIM47-206ENST00000592942 MTIF2P46199 727 aaKnown RBP16.26■□□□□ 0.19
TRIM47-206ENST00000592942 APBA1Q02410 837 aa16.26■□□□□ 0.19
TRIM47-206ENST00000592942 CETN1Q12798 172 aa16.26■□□□□ 0.19
TRIM47-206ENST00000592942 TDGQ13569 410 aa16.26■□□□□ 0.19
TRIM47-206ENST00000592942 MAN2A1Q16706 1144 aa16.26■□□□□ 0.19
TRIM47-206ENST00000592942 TCP11X2Q5H9J9 407 aa16.26■□□□□ 0.19
TRIM47-206ENST00000592942 PPP1R26Q5T8A7 1209 aaPredicted RBP16.26■□□□□ 0.19
TRIM47-206ENST00000592942 RRAGAQ7L523 313 aa16.26■□□□□ 0.19
TRIM47-206ENST00000592942 TTC39CQ8N584 583 aa16.26■□□□□ 0.19
TRIM47-206ENST00000592942 TUBGCP2Q9BSJ2 902 aa16.26■□□□□ 0.19
TRIM47-206ENST00000592942 CRACR2AQ9BSW2 395 aa16.26■□□□□ 0.19
TRIM47-206ENST00000592942 LRFN3Q9BTN0 628 aa16.26■□□□□ 0.19
TRIM47-206ENST00000592942 TTLL2Q9BWV7 592 aa16.26■□□□□ 0.19
TRIM47-206ENST00000592942 SLC46A2Q9BY10 475 aa16.26■□□□□ 0.19
TRIM47-206ENST00000592942 INTS2Q9H0H0 1204 aaKnown RBP16.26■□□□□ 0.19
TRIM47-206ENST00000592942 ATXN3LQ9H3M9 355 aa16.26■□□□□ 0.19
TRIM47-206ENST00000592942 FAM49BQ9NUQ9 324 aa16.26■□□□□ 0.19
TRIM47-206ENST00000592942 FANCLQ9NW38 375 aa16.26■□□□□ 0.19
TRIM47-206ENST00000592942 IL37Q9NZH6 218 aa16.26■□□□□ 0.19
TRIM47-206ENST00000592942 MAGED2Q9UNF1 606 aaPredicted RBP16.26■□□□□ 0.19
TRIM47-206ENST00000592942 NCANO14594 1321 aa16.25■□□□□ 0.19
TRIM47-206ENST00000592942 GTPBP10A4D1E9 387 aaKnown RBP16.25■□□□□ 0.19
TRIM47-206ENST00000592942 KCNJ18B7U540 433 aa16.25■□□□□ 0.19
TRIM47-206ENST00000592942 HHLA1C9JL84 531 aa16.25■□□□□ 0.19
TRIM47-206ENST00000592942 TRIM66O15016 1216 aa16.25■□□□□ 0.19
TRIM47-206ENST00000592942 NARSO43776 548 aaKnown RBP16.25■□□□□ 0.19
TRIM47-206ENST00000592942 FGF19O95750 216 aa16.25■□□□□ 0.19
TRIM47-206ENST00000592942 TBXAS1P24557 533 aaPredicted RBP16.25■□□□□ 0.19
TRIM47-206ENST00000592942 PON1P27169 355 aa16.25■□□□□ 0.19
TRIM47-206ENST00000592942 CYP4F8P98187 520 aa16.25■□□□□ 0.19
TRIM47-206ENST00000592942 KCNMA1Q12791 1236 aa16.25■□□□□ 0.19
TRIM47-206ENST00000592942 KCNJ12Q14500 433 aa16.25■□□□□ 0.19
TRIM47-206ENST00000592942 VWA3BQ502W6 1294 aa16.25■□□□□ 0.19
TRIM47-206ENST00000592942 DENND5BQ6ZUT9 1274 aa16.25■□□□□ 0.19
TRIM47-206ENST00000592942 FAM114A1Q8IWE2 563 aa16.25■□□□□ 0.19
TRIM47-206ENST00000592942 RSPRY1Q96DX4 576 aa16.25■□□□□ 0.19
TRIM47-206ENST00000592942 HEXIM2Q96MH2 286 aaKnown RBP16.25■□□□□ 0.19
TRIM47-206ENST00000592942 LRRC3BQ96PB8 259 aa16.25■□□□□ 0.19
TRIM47-206ENST00000592942 MED10Q9BTT4 135 aa16.25■□□□□ 0.19
TRIM47-206ENST00000592942 GPR88Q9GZN0 384 aa16.25■□□□□ 0.19
TRIM47-206ENST00000592942 NDST4Q9H3R1 872 aa16.25■□□□□ 0.19
TRIM47-206ENST00000592942 TRPV4Q9HBA0 871 aa16.25■□□□□ 0.19
TRIM47-206ENST00000592942 TECTAO75443 2155 aa16.25■□□□□ 0.19
TRIM47-206ENST00000592942 DENND4CQ5VZ89 1909 aa16.24■□□□□ 0.19
TRIM47-206ENST00000592942 ECI2O75521 394 aa16.24■□□□□ 0.19
TRIM47-206ENST00000592942 AP1G2O75843 785 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms