RNA–Protein interactions for RNA: ENST00000592412.5

CIRBP-238, Transcript of cold inducible RNA binding protein, human

TSL 4

Gene CIRBP, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-238	ENST00000592412	TBC1D7	Q9P0N9	293 aa		19.62	■□□□□ 0.73
CIRBP-238	ENST00000592412	INVS	Q9Y283	1065 aa		19.62	■□□□□ 0.73
CIRBP-238	ENST00000592412	HELZ	P42694	1942 aa	Known RBP	19.62	■□□□□ 0.73
CIRBP-238	ENST00000592412	PTPRJ	Q12913	1337 aa		19.61	■□□□□ 0.73
CIRBP-238	ENST00000592412	TRAV19	A0A0A6YYK7	116 aa		19.61	■□□□□ 0.73
CIRBP-238	ENST00000592412	LNP1	A1A4G5	178 aa		19.61	■□□□□ 0.73
CIRBP-238	ENST00000592412	HUS1	O60921	280 aa		19.61	■□□□□ 0.73
CIRBP-238	ENST00000592412	BMP15	O95972	392 aa		19.61	■□□□□ 0.73
CIRBP-238	ENST00000592412	CHRM1	P11229	460 aa	Predicted RBP	19.61	■□□□□ 0.73
CIRBP-238	ENST00000592412	TCF3	P15923	654 aa		19.61	■□□□□ 0.73
CIRBP-238	ENST00000592412	OPRD1	P41143	372 aa		19.61	■□□□□ 0.73
CIRBP-238	ENST00000592412	IFNAR2	P48551	515 aa		19.61	■□□□□ 0.73
CIRBP-238	ENST00000592412	MYL7	Q01449	175 aa		19.61	■□□□□ 0.73
CIRBP-238	ENST00000592412	ELF2	Q15723	593 aa		19.61	■□□□□ 0.73
CIRBP-238	ENST00000592412	SOWAHA	Q2M3V2	549 aa		19.61	■□□□□ 0.73
CIRBP-238	ENST00000592412	ERICH6B	Q5W0A0	696 aa		19.61	■□□□□ 0.73
CIRBP-238	ENST00000592412	FAM171B	Q6P995	826 aa		19.61	■□□□□ 0.73
CIRBP-238	ENST00000592412	LIMS2	Q7Z4I7	341 aa		19.61	■□□□□ 0.73
CIRBP-238	ENST00000592412	ADGRF2	Q8IZF7	708 aa		19.61	■□□□□ 0.73
CIRBP-238	ENST00000592412	ACD	Q96AP0	544 aa		19.61	■□□□□ 0.73
CIRBP-238	ENST00000592412	CBWD1	Q9BRT8	395 aa		19.61	■□□□□ 0.73
CIRBP-238	ENST00000592412	MRPL44	Q9H9J2	332 aa	Known RBP	19.61	■□□□□ 0.73
CIRBP-238	ENST00000592412	RBAK	Q9NYW8	714 aa	Predicted RBP	19.61	■□□□□ 0.73
CIRBP-238	ENST00000592412	WASF3	Q9UPY6	502 aa		19.61	■□□□□ 0.73
CIRBP-238	ENST00000592412	SNX9	Q9Y5X1	595 aa		19.61	■□□□□ 0.73
CIRBP-238	ENST00000592412	DMXL2	Q8TDJ6	3036 aa		19.61	■□□□□ 0.73
CIRBP-238	ENST00000592412	DSP	P15924	2871 aa	Known RBP	19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	NUP205	Q92621	2012 aa		19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	GOLGA8IP	A6NC78	632 aa		19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	GOLGA8J	A6NMD2	632 aa		19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	C4orf47	A7E2U8	309 aa		19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412		K7EQS6	105 aa		19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	ATP2C2	O75185	946 aa		19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	RHOBTB1	O94844	696 aa		19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	CAVIN2	O95810	425 aa		19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	BCKDHB	P21953	392 aa		19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	PSMD2	Q13200	908 aa		19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	PMS2CL	Q68D20	193 aa		19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	RASSF3	Q86WH2	238 aa		19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	CSGALNACT2	Q8N6G5	542 aa		19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	TOP6BL	Q8N6T0	577 aa		19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	USP33	Q8TEY7	942 aa		19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	KBTBD7	Q8WVZ9	684 aa		19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	FUBP3	Q96I24	572 aa	Known RBP eCLIP	19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	ACCS	Q96QU6	501 aa		19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	TPSD1	Q9BZJ3	242 aa		19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	MTMR12	Q9C0I1	747 aa		19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	PDE11A	Q9HCR9	933 aa		19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	SEL1L	Q9UBV2	794 aa		19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	ITGA11	Q9UKX5	1188 aa		19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	ARHGAP26	Q9UNA1	814 aa		19.6	■□□□□ 0.73
CIRBP-238	ENST00000592412	PTPRD	P23468	1912 aa		19.59	■□□□□ 0.73
CIRBP-238	ENST00000592412	HNRNPL	P14866	589 aa	Known RBP eCLIP	19.59	■□□□□ 0.73
CIRBP-238	ENST00000592412	GART	P22102	1010 aa		19.59	■□□□□ 0.73
CIRBP-238	ENST00000592412	LMO2	P25791	158 aa		19.59	■□□□□ 0.73
CIRBP-238	ENST00000592412	MAGEA11	P43364	429 aa		19.59	■□□□□ 0.73
CIRBP-238	ENST00000592412	DGKE	P52429	567 aa		19.59	■□□□□ 0.73
CIRBP-238	ENST00000592412	USP46	P62068	366 aa		19.59	■□□□□ 0.73
CIRBP-238	ENST00000592412	MESP2	Q0VG99	397 aa		19.59	■□□□□ 0.73
CIRBP-238	ENST00000592412	LARP1B	Q659C4	914 aa	Known RBP	19.59	■□□□□ 0.73
CIRBP-238	ENST00000592412	LMBRD2	Q68DH5	695 aa	Predicted RBP	19.59	■□□□□ 0.73
CIRBP-238	ENST00000592412	BRAP	Q7Z569	592 aa		19.59	■□□□□ 0.73
CIRBP-238	ENST00000592412	SPATA2L	Q8IUW3	424 aa	Predicted RBP	19.59	■□□□□ 0.73
CIRBP-238	ENST00000592412	SFTPA1	Q8IWL2	248 aa		19.59	■□□□□ 0.73
CIRBP-238	ENST00000592412	SCN4B	Q8IWT1	228 aa		19.59	■□□□□ 0.73
CIRBP-238	ENST00000592412	SPATA18	Q8TC71	538 aa		19.59	■□□□□ 0.73
CIRBP-238	ENST00000592412	CRTAC1	Q9NQ79	661 aa		19.59	■□□□□ 0.73
CIRBP-238	ENST00000592412	OLFML3	Q9NRN5	406 aa		19.59	■□□□□ 0.73
CIRBP-238	ENST00000592412	STK17A	Q9UEE5	414 aa		19.59	■□□□□ 0.73
CIRBP-238	ENST00000592412	FBXO2	Q9UK22	296 aa	Predicted RBP	19.59	■□□□□ 0.73
CIRBP-238	ENST00000592412	CLIC4	Q9Y696	253 aa		19.59	■□□□□ 0.73
CIRBP-238	ENST00000592412	FRMD3	A2A2Y4	597 aa		19.58	■□□□□ 0.72
CIRBP-238	ENST00000592412	PATE3	B3GLJ2	98 aa		19.58	■□□□□ 0.72
CIRBP-238	ENST00000592412	GCNT3	O95395	438 aa		19.58	■□□□□ 0.72
CIRBP-238	ENST00000592412	PROS1	P07225	676 aa		19.58	■□□□□ 0.72
CIRBP-238	ENST00000592412	LHX1	P48742	406 aa		19.58	■□□□□ 0.72
CIRBP-238	ENST00000592412	SEC13	P55735	322 aa		19.58	■□□□□ 0.72
CIRBP-238	ENST00000592412	PSMC1	P62191	440 aa	Known RBP	19.58	■□□□□ 0.72
CIRBP-238	ENST00000592412	TSTD1	Q8NFU3	115 aa		19.58	■□□□□ 0.72
CIRBP-238	ENST00000592412	OR5B17	Q8NGF7	314 aa		19.58	■□□□□ 0.72
CIRBP-238	ENST00000592412	CACTIN	Q8WUQ7	758 aa	Known RBP	19.58	■□□□□ 0.72
CIRBP-238	ENST00000592412	MYLPF	Q96A32	169 aa		19.58	■□□□□ 0.72
CIRBP-238	ENST00000592412	EXOC4	Q96A65	974 aa		19.58	■□□□□ 0.72
CIRBP-238	ENST00000592412	PCIF1	Q9H4Z3	704 aa		19.58	■□□□□ 0.72
CIRBP-238	ENST00000592412	EXOC7	Q9UPT5	735 aa		19.58	■□□□□ 0.72
CIRBP-238	ENST00000592412	SMC3	Q9UQE7	1217 aa		19.58	■□□□□ 0.72
CIRBP-238	ENST00000592412	LAMA5	O15230	3695 aa		19.58	■□□□□ 0.72
CIRBP-238	ENST00000592412	FREM2	Q5SZK8	3169 aa		19.57	■□□□□ 0.72
CIRBP-238	ENST00000592412	NBEA	Q8NFP9	2946 aa		19.57	■□□□□ 0.72
CIRBP-238	ENST00000592412	PKD1L2	Q7Z442	2459 aa		19.57	■□□□□ 0.72
CIRBP-238	ENST00000592412	C1QTNF9B	B2RNN3	333 aa		19.57	■□□□□ 0.72
CIRBP-238	ENST00000592412	TULP1	O00294	542 aa	Predicted RBP	19.57	■□□□□ 0.72
CIRBP-238	ENST00000592412	CDX4	O14627	284 aa	Predicted RBP	19.57	■□□□□ 0.72
CIRBP-238	ENST00000592412	LDHA	P00338	332 aa	Known RBP	19.57	■□□□□ 0.72
CIRBP-238	ENST00000592412	KRT19	P08727	400 aa		19.57	■□□□□ 0.72
CIRBP-238	ENST00000592412	C1QTNF9	P0C862	333 aa		19.57	■□□□□ 0.72
CIRBP-238	ENST00000592412	GAP43	P17677	238 aa		19.57	■□□□□ 0.72
CIRBP-238	ENST00000592412	HDC	P19113	662 aa		19.57	■□□□□ 0.72
CIRBP-238	ENST00000592412	PCSK1	P29120	753 aa		19.57	■□□□□ 0.72
CIRBP-238	ENST00000592412	GBP1	P32455	592 aa		19.57	■□□□□ 0.72

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