RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 CRTAC1Q9NQ79 661 aa14.44□□□□□ -0.1
CAPNS1-213ENST00000592354 FAM13BQ9NYF5 915 aa14.44□□□□□ -0.1
CAPNS1-213ENST00000592354 ZMYM5Q9UJ78 669 aa14.44□□□□□ -0.1
CAPNS1-213ENST00000592354 GMEB2Q9UKD1 530 aa14.44□□□□□ -0.1
CAPNS1-213ENST00000592354 CDH9Q9ULB4 789 aa14.44□□□□□ -0.1
CAPNS1-213ENST00000592354 RAB23Q9ULC3 237 aa14.44□□□□□ -0.1
CAPNS1-213ENST00000592354 USP18Q9UMW8 372 aa14.44□□□□□ -0.1
CAPNS1-213ENST00000592354 PCDHA7Q9UN72 937 aa14.44□□□□□ -0.1
CAPNS1-213ENST00000592354 NME7Q9Y5B8 376 aa14.44□□□□□ -0.1
CAPNS1-213ENST00000592354 WDR87Q6ZQQ6 2873 aa14.44□□□□□ -0.1
CAPNS1-213ENST00000592354 EML5Q05BV3 1969 aa14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 TRAV19A0A0A6YYK7 116 aa14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 C2orf78A6NCI8 922 aa14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 CLSTN1O94985 981 aa14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 WARSP23381 471 aaKnown RBP14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 BDNFP23560 247 aa14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 MAGEA11P43364 429 aa14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 CASP4P49662 377 aa14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 FOXK2Q01167 660 aa14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 DNM1Q05193 864 aaKnown RBP14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 USP4Q13107 963 aa14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 MTF1Q14872 753 aa14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 RSPO4Q2I0M5 234 aaPredicted RBP14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 MDH1BQ5I0G3 518 aa14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 RESP18Q5W5W9 173 aa14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 FSTL4Q6MZW2 842 aa14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 C4orf50Q6ZRC1 276 aa14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 DPH6Q7L8W6 267 aa14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 HS2ST1Q7LGA3 356 aa14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 LIMS2Q7Z4I7 341 aa14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 ARL14EPQ8N8R7 260 aaPredicted RBP14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 XXYLT1Q8NBI6 393 aa14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 PCED1BQ96HM7 432 aa14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 MYRFLQ96LU7 910 aa14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 CYP2S1Q96SQ9 504 aa14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 PARD6AQ9NPB6 346 aa14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 MAGEC2Q9UBF1 373 aaPredicted RBP14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 WNT6Q9Y6F9 365 aa14.43□□□□□ -0.1
CAPNS1-213ENST00000592354 MED19A0JLT2 244 aaPredicted RBP14.42□□□□□ -0.1
CAPNS1-213ENST00000592354 HRO43593 1189 aa14.42□□□□□ -0.1
CAPNS1-213ENST00000592354 CST3P01034 146 aaPredicted RBP14.42□□□□□ -0.1
CAPNS1-213ENST00000592354 USP17L7P0C7H9 530 aa14.42□□□□□ -0.1
CAPNS1-213ENST00000592354 ANXA13P27216 316 aa14.42□□□□□ -0.1
CAPNS1-213ENST00000592354 GRIK1P39086 918 aa14.42□□□□□ -0.1
CAPNS1-213ENST00000592354 PXNP49023 591 aaPredicted RBP14.42□□□□□ -0.1
CAPNS1-213ENST00000592354 USP46P62068 366 aa14.42□□□□□ -0.1
CAPNS1-213ENST00000592354 TNNC1P63316 161 aa14.42□□□□□ -0.1
CAPNS1-213ENST00000592354 FAM160A1Q05DH4 1040 aa14.42□□□□□ -0.1
CAPNS1-213ENST00000592354 SPEM2Q0P670 501 aa14.42□□□□□ -0.1
CAPNS1-213ENST00000592354 SIM2Q14190 667 aaPredicted RBP14.42□□□□□ -0.1
CAPNS1-213ENST00000592354 ZNF268Q14587 947 aaPredicted RBP14.42□□□□□ -0.1
CAPNS1-213ENST00000592354 KCNB1Q14721 858 aa14.42□□□□□ -0.1
CAPNS1-213ENST00000592354 ZNF77Q15935 545 aa14.42□□□□□ -0.1
CAPNS1-213ENST00000592354 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.42□□□□□ -0.1
CAPNS1-213ENST00000592354 ELMO3Q96BJ8 720 aa14.42□□□□□ -0.1
CAPNS1-213ENST00000592354 GZF1Q9H116 711 aaPredicted RBP14.42□□□□□ -0.1
CAPNS1-213ENST00000592354 SNX25Q9H3E2 840 aa14.42□□□□□ -0.1
CAPNS1-213ENST00000592354 DPEP3Q9H4B8 488 aa14.42□□□□□ -0.1
CAPNS1-213ENST00000592354 POLR3BQ9NW08 1133 aaPredicted RBP14.42□□□□□ -0.1
CAPNS1-213ENST00000592354 SERTAD1Q9UHV2 236 aa14.42□□□□□ -0.1
CAPNS1-213ENST00000592354 EXOC3O60645 756 aa14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 RNF40O75150 1001 aa14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 PAPSS2O95340 614 aaPredicted RBP14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 EGFP01133 1207 aa14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 IFNAR2P48551 515 aa14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 CACNA2D1P54289 1103 aa14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 GRSF1Q12849 480 aaKnown RBP eCLIP14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 PUM1Q14671 1186 aaKnown RBP eCLIP14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 PDGFRLQ15198 375 aa14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 MAPRE1Q15691 268 aaKnown RBP14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 BMT2Q1RMZ1 405 aa14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 WDR72Q3MJ13 1102 aa14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 TMEM196Q5HYL7 178 aa14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 LAIR1Q6GTX8 287 aa14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 LONP2Q86WA8 852 aa14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 CEP57L1Q8IYX8 460 aa14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 CPA6Q8N4T0 437 aa14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 FSIP1Q8NA03 581 aa14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 OR6B3Q8NGW1 331 aa14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 MYCBPAPQ8TBZ2 947 aa14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 PLEKHO2Q8TD55 490 aa14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 ZNF516Q92618 1163 aa14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 CHAMP1Q96JM3 812 aa14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 FBRSL1Q9HCM7 1045 aaKnown RBP14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 DUS2Q9NX74 493 aaKnown RBP14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 DLL3Q9NYJ7 618 aa14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 GCNT4Q9P109 453 aa14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 NXF1Q9UBU9 619 aaKnown RBP14.41□□□□□ -0.1
CAPNS1-213ENST00000592354 ATG2BQ96BY7 2078 aa14.4□□□□□ -0.1
CAPNS1-213ENST00000592354 CACNA1AO00555 2505 aa14.4□□□□□ -0.1
CAPNS1-213ENST00000592354 SOBPA7XYQ1 873 aa14.4□□□□□ -0.1
CAPNS1-213ENST00000592354 F8VP50 259 aa14.4□□□□□ -0.1
CAPNS1-213ENST00000592354 CLDN5O00501 218 aa14.4□□□□□ -0.1
CAPNS1-213ENST00000592354 ACTN4O43707 911 aaKnown RBP14.4□□□□□ -0.1
CAPNS1-213ENST00000592354 RAP1GAPP47736 663 aa14.4□□□□□ -0.1
CAPNS1-213ENST00000592354 MYL6P60660 151 aa14.4□□□□□ -0.1
CAPNS1-213ENST00000592354 LMNB2Q03252 620 aa14.4□□□□□ -0.1
CAPNS1-213ENST00000592354 IFRD2Q12894 506 aaPredicted RBP14.4□□□□□ -0.1
CAPNS1-213ENST00000592354 BIRC3Q13489 604 aa14.4□□□□□ -0.1
CAPNS1-213ENST00000592354 TRPC3Q13507 836 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms