RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 PADI3Q9ULW8 664 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 KCNJ14Q9UNX9 436 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 SPEF1Q9Y4P9 236 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 PCDHA10Q9Y5I2 948 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 SQORQ9Y6N5 450 aa8.41□□□□□ -1.06
VMP1-213ENST00000591877 PLXNA4Q9HCM2 1894 aa8.4□□□□□ -1.06
VMP1-213ENST00000591877 CYP3A7-CYP3A51PA0A087WV96 503 aa8.4□□□□□ -1.06
VMP1-213ENST00000591877 B8ZZF3 427 aa8.4□□□□□ -1.06
VMP1-213ENST00000591877 MGEA5O60502 916 aa8.4□□□□□ -1.06
VMP1-213ENST00000591877 PSMD10O75832 226 aa8.4□□□□□ -1.06
VMP1-213ENST00000591877 LARGE1O95461 756 aa8.4□□□□□ -1.06
VMP1-213ENST00000591877 CBX7O95931 251 aa8.4□□□□□ -1.06
VMP1-213ENST00000591877 RPLP2P05387 115 aaKnown RBP8.4□□□□□ -1.06
VMP1-213ENST00000591877 FDPSP14324 419 aaKnown RBP8.4□□□□□ -1.06
VMP1-213ENST00000591877 CYP3A7P24462 503 aa8.4□□□□□ -1.06
VMP1-213ENST00000591877 KCNQ1P51787 676 aa8.4□□□□□ -1.06
VMP1-213ENST00000591877 MRPS5P82675 430 aaKnown RBP8.4□□□□□ -1.06
VMP1-213ENST00000591877 TNK2Q07912 1038 aa8.4□□□□□ -1.06
VMP1-213ENST00000591877 TMEM266Q2M3C6 531 aa8.4□□□□□ -1.06
VMP1-213ENST00000591877 CYP27C1Q4G0S4 372 aa8.4□□□□□ -1.06
VMP1-213ENST00000591877 Q4G0T1 1027 aa8.4□□□□□ -1.06
VMP1-213ENST00000591877 PIK3R6Q5UE93 754 aa8.4□□□□□ -1.06
VMP1-213ENST00000591877 CRTC3Q6UUV7 619 aa8.4□□□□□ -1.06
VMP1-213ENST00000591877 LCNL1Q6ZST4 164 aa8.4□□□□□ -1.06
VMP1-213ENST00000591877 TRMT1LQ7Z2T5 733 aaKnown RBP8.4□□□□□ -1.06
VMP1-213ENST00000591877 MTDHQ86UE4 582 aaKnown RBP8.4□□□□□ -1.06
VMP1-213ENST00000591877 SMAP1Q8IYB5 467 aaPredicted RBP8.4□□□□□ -1.06
VMP1-213ENST00000591877 NME8Q8N427 588 aa8.4□□□□□ -1.06
VMP1-213ENST00000591877 LINC01465Q8N7H1 131 aa8.4□□□□□ -1.06
VMP1-213ENST00000591877 RIT2Q99578 217 aa8.4□□□□□ -1.06
VMP1-213ENST00000591877 UNC45AQ9H3U1 944 aa8.4□□□□□ -1.06
VMP1-213ENST00000591877 SAMD15Q9P1V8 674 aa8.4□□□□□ -1.06
VMP1-213ENST00000591877 NOC2LQ9Y3T9 749 aaKnown RBP8.4□□□□□ -1.06
VMP1-213ENST00000591877 ADGRA3Q8IWK6 1321 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 STK36Q9NRP7 1315 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 CCDC194A0A1B0GVG4 234 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 E2F8A0AVK6 867 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 SHISA3A0PJX4 238 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 H3BNC9 293 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 CBX4O00257 560 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 WNT9AO14904 365 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 SLC37A4O43826 429 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 GPR32O75388 356 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 KATNA1O75449 491 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 DGKIO75912 1065 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 ZNF205O95201 554 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 STBD1O95210 358 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 VTNP04004 478 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 RAP1GAPP47736 663 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 SEPHS1P49903 392 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 NEK2P51955 445 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 MCL1Q07820 350 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 ST3GAL1Q11201 340 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 GPM6BQ13491 265 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 ME3Q16798 604 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 INF2Q27J81 1249 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 EARS2Q5JPH6 523 aaKnown RBP8.39□□□□□ -1.07
VMP1-213ENST00000591877 LRCH2Q5VUJ6 765 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 GALNT17Q6IS24 598 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 CPLX2Q6PUV4 134 aaKnown RBP8.39□□□□□ -1.07
VMP1-213ENST00000591877 KCNT2Q6UVM3 1135 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 NECAB1Q8N987 351 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 ETNPPLQ8TBG4 499 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 NETO1Q8TDF5 533 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 HEXIM2Q96MH2 286 aaKnown RBP8.39□□□□□ -1.07
VMP1-213ENST00000591877 SAMD11Q96NU1 681 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 FCRL3Q96P31 734 aaPredicted RBP8.39□□□□□ -1.07
VMP1-213ENST00000591877 PPP1R16BQ96T49 567 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 SLC12A9Q9BXP2 914 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 ERVK-5Q9HDB9 667 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 GPATCH2Q9NW75 528 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 PCDHA9Q9Y5H5 950 aa8.39□□□□□ -1.07
VMP1-213ENST00000591877 ARID2Q68CP9 1835 aa8.38□□□□□ -1.07
VMP1-213ENST00000591877 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.38□□□□□ -1.07
VMP1-213ENST00000591877 TMEM150BA6NC51 233 aa8.38□□□□□ -1.07
VMP1-213ENST00000591877 C5orf67F2Z3F1 127 aa8.38□□□□□ -1.07
VMP1-213ENST00000591877 M0QZ92 97 aa8.38□□□□□ -1.07
VMP1-213ENST00000591877 CHMP2AO43633 222 aa8.38□□□□□ -1.07
VMP1-213ENST00000591877 GAS7O60861 476 aa8.38□□□□□ -1.07
VMP1-213ENST00000591877 VAV1P15498 845 aa8.38□□□□□ -1.07
VMP1-213ENST00000591877 SFNP31947 248 aa8.38□□□□□ -1.07
VMP1-213ENST00000591877 BMPR1AP36894 532 aa8.38□□□□□ -1.07
VMP1-213ENST00000591877 GATMP50440 423 aa8.38□□□□□ -1.07
VMP1-213ENST00000591877 CLCN3P51790 818 aa8.38□□□□□ -1.07
VMP1-213ENST00000591877 JAK3P52333 1124 aa8.38□□□□□ -1.07
VMP1-213ENST00000591877 TBX4P57082 545 aa8.38□□□□□ -1.07
VMP1-213ENST00000591877 PRKCEQ02156 737 aa8.38□□□□□ -1.07
VMP1-213ENST00000591877 PAK1Q13153 545 aa8.38□□□□□ -1.07
VMP1-213ENST00000591877 NONOQ15233 471 aaKnown RBP eCLIP8.38□□□□□ -1.07
VMP1-213ENST00000591877 TARBP2Q15633 366 aaKnown RBP8.38□□□□□ -1.07
VMP1-213ENST00000591877 MLANAQ16655 118 aa8.38□□□□□ -1.07
VMP1-213ENST00000591877 KIZQ2M2Z5 673 aa8.38□□□□□ -1.07
VMP1-213ENST00000591877 EFCAB12Q6NXP0 572 aa8.38□□□□□ -1.07
VMP1-213ENST00000591877 MOXD1Q6UVY6 613 aa8.38□□□□□ -1.07
VMP1-213ENST00000591877 FAM228AQ86W67 206 aa8.38□□□□□ -1.07
VMP1-213ENST00000591877 MRPL38Q96DV4 380 aaKnown RBP8.38□□□□□ -1.07
VMP1-213ENST00000591877 TCTN2Q96GX1 697 aa8.38□□□□□ -1.07
VMP1-213ENST00000591877 TEKT3Q9BXF9 490 aa8.38□□□□□ -1.07
VMP1-213ENST00000591877 FTHL17Q9BXU8 183 aa8.38□□□□□ -1.07
VMP1-213ENST00000591877 C22orf23Q9BZE7 217 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms