RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 PPP2R5EQ16537 467 aa13.69□□□□□ -0.22
PTBP1-216ENST00000590887 PTPN20Q4JDL3 420 aa13.69□□□□□ -0.22
PTBP1-216ENST00000590887 PKDCCQ504Y2 493 aa13.69□□□□□ -0.22
PTBP1-216ENST00000590887 MDH1BQ5I0G3 518 aa13.69□□□□□ -0.22
PTBP1-216ENST00000590887 EFHC1Q5JVL4 640 aa13.69□□□□□ -0.22
PTBP1-216ENST00000590887 SEL1L2Q5TEA6 688 aa13.69□□□□□ -0.22
PTBP1-216ENST00000590887 ZNF280DQ6N043 979 aa13.69□□□□□ -0.22
PTBP1-216ENST00000590887 OSTM1Q86WC4 334 aa13.69□□□□□ -0.22
PTBP1-216ENST00000590887 CMTR2Q8IYT2 770 aaKnown RBP13.69□□□□□ -0.22
PTBP1-216ENST00000590887 TMEM130Q8N3G9 435 aa13.69□□□□□ -0.22
PTBP1-216ENST00000590887 C3orf58Q8NDZ4 430 aa13.69□□□□□ -0.22
PTBP1-216ENST00000590887 MAIP1Q8WWC4 291 aa13.69□□□□□ -0.22
PTBP1-216ENST00000590887 KCTD13Q8WZ19 329 aa13.69□□□□□ -0.22
PTBP1-216ENST00000590887 UBXN4Q92575 508 aa13.69□□□□□ -0.22
PTBP1-216ENST00000590887 GOLGA1Q92805 767 aa13.69□□□□□ -0.22
PTBP1-216ENST00000590887 MCRS1Q96EZ8 462 aa13.69□□□□□ -0.22
PTBP1-216ENST00000590887 TRIM62Q9BVG3 475 aa13.69□□□□□ -0.22
PTBP1-216ENST00000590887 CARD9Q9H257 536 aa13.69□□□□□ -0.22
PTBP1-216ENST00000590887 DPEP3Q9H4B8 488 aa13.69□□□□□ -0.22
PTBP1-216ENST00000590887 LRRC4Q9HBW1 653 aa13.69□□□□□ -0.22
PTBP1-216ENST00000590887 ASNSD1Q9NWL6 643 aa13.69□□□□□ -0.22
PTBP1-216ENST00000590887 PRG3Q9Y2Y8 225 aaPredicted RBP13.69□□□□□ -0.22
PTBP1-216ENST00000590887 TRIM43BA6NCK2 446 aa13.68□□□□□ -0.22
PTBP1-216ENST00000590887 ATMINO43313 823 aaPredicted RBP13.68□□□□□ -0.22
PTBP1-216ENST00000590887 PSTPIP1O43586 416 aa13.68□□□□□ -0.22
PTBP1-216ENST00000590887 FGBP02675 491 aa13.68□□□□□ -0.22
PTBP1-216ENST00000590887 ERBB2P04626 1255 aa13.68□□□□□ -0.22
PTBP1-216ENST00000590887 GALTP07902 379 aa13.68□□□□□ -0.22
PTBP1-216ENST00000590887 CSF2RAP15509 400 aa13.68□□□□□ -0.22
PTBP1-216ENST00000590887 LAG3P18627 525 aa13.68□□□□□ -0.22
PTBP1-216ENST00000590887 GTF2F1P35269 517 aaKnown RBP eCLIP13.68□□□□□ -0.223e-7■■■■□ 22.9
PTBP1-216ENST00000590887 RWDD2BP57060 319 aa13.68□□□□□ -0.22
PTBP1-216ENST00000590887 SLC6A3Q01959 620 aa13.68□□□□□ -0.22
PTBP1-216ENST00000590887 ITIH3Q06033 890 aa13.68□□□□□ -0.22
PTBP1-216ENST00000590887 PAN2Q504Q3 1202 aaKnown RBP13.68□□□□□ -0.22
PTBP1-216ENST00000590887 FAM171BQ6P995 826 aa13.68□□□□□ -0.22
PTBP1-216ENST00000590887 PSRC1Q6PGN9 363 aaPredicted RBP13.68□□□□□ -0.22
PTBP1-216ENST00000590887 ANKS3Q6ZW76 656 aa13.68□□□□□ -0.22
PTBP1-216ENST00000590887 ARCQ7LC44 396 aa13.68□□□□□ -0.22
PTBP1-216ENST00000590887 XYLT1Q86Y38 959 aa13.68□□□□□ -0.22
PTBP1-216ENST00000590887 SPATA2LQ8IUW3 424 aaPredicted RBP13.68□□□□□ -0.22
PTBP1-216ENST00000590887 RHOT1Q8IXI2 618 aa13.68□□□□□ -0.22
PTBP1-216ENST00000590887 SIX6OS1Q8N1H7 587 aa13.68□□□□□ -0.22
PTBP1-216ENST00000590887 CRIPAKQ8N1N5 446 aa13.68□□□□□ -0.22
PTBP1-216ENST00000590887 TRIM43Q96BQ3 446 aaPredicted RBP13.68□□□□□ -0.22
PTBP1-216ENST00000590887 CPXM1Q96SM3 734 aa13.68□□□□□ -0.22
PTBP1-216ENST00000590887 PAAF1Q9BRP4 392 aa13.68□□□□□ -0.22
PTBP1-216ENST00000590887 CARD6Q9BX69 1037 aa13.68□□□□□ -0.22
PTBP1-216ENST00000590887 PNPLA8Q9NP80 782 aa13.68□□□□□ -0.22
PTBP1-216ENST00000590887 PCDHA3Q9Y5H8 950 aa13.68□□□□□ -0.22
PTBP1-216ENST00000590887 TIMM13Q9Y5L4 95 aaPredicted RBP13.68□□□□□ -0.22
PTBP1-216ENST00000590887 FNDC1Q4ZHG4 1894 aaPredicted RBP13.67□□□□□ -0.22
PTBP1-216ENST00000590887 GOLGA6L10A0A0M3HER8 536 aa13.67□□□□□ -0.22
PTBP1-216ENST00000590887 GOLGA8SH3BPF8 625 aa13.67□□□□□ -0.22
PTBP1-216ENST00000590887 AP1G2O75843 785 aa13.67□□□□□ -0.22
PTBP1-216ENST00000590887 GLI1P08151 1106 aa13.67□□□□□ -0.22
PTBP1-216ENST00000590887 CCDC130P13994 396 aa13.67□□□□□ -0.22
PTBP1-216ENST00000590887 ACAT1P24752 427 aaKnown RBP13.67□□□□□ -0.22
PTBP1-216ENST00000590887 PSMA2P25787 234 aa13.67□□□□□ -0.22
PTBP1-216ENST00000590887 SSR1P43307 286 aaKnown RBP13.67□□□□□ -0.22
PTBP1-216ENST00000590887 RPL34P49207 117 aaKnown RBP13.67□□□□□ -0.22
PTBP1-216ENST00000590887 FPGSQ05932 587 aa13.67□□□□□ -0.22
PTBP1-216ENST00000590887 FAM102AQ5T9C2 384 aaPredicted RBP13.67□□□□□ -0.22
PTBP1-216ENST00000590887 CYP4A22Q5TCH4 519 aa13.67□□□□□ -0.22
PTBP1-216ENST00000590887 LRRC38Q5VT99 294 aa13.67□□□□□ -0.22
PTBP1-216ENST00000590887 FAM171A1Q5VUB5 890 aa13.67□□□□□ -0.22
PTBP1-216ENST00000590887 CD300LGQ6UXG3 332 aa13.67□□□□□ -0.22
PTBP1-216ENST00000590887 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.67□□□□□ -0.22
PTBP1-216ENST00000590887 TTC30AQ86WT1 665 aa13.67□□□□□ -0.22
PTBP1-216ENST00000590887 FUKQ8N0W3 1084 aa13.67□□□□□ -0.22
PTBP1-216ENST00000590887 NIPA2Q8N8Q9 360 aa13.67□□□□□ -0.22
PTBP1-216ENST00000590887 ACTRT1Q8TDG2 376 aa13.67□□□□□ -0.22
PTBP1-216ENST00000590887 HASPINQ8TF76 798 aa13.67□□□□□ -0.22
PTBP1-216ENST00000590887 C2orf15Q8WU43 125 aaKnown RBP13.67□□□□□ -0.22
PTBP1-216ENST00000590887 FUBP3Q96I24 572 aaKnown RBP eCLIP13.67□□□□□ -0.22
PTBP1-216ENST00000590887 ZNF558Q96NG5 402 aa13.67□□□□□ -0.22
PTBP1-216ENST00000590887 MCEEQ96PE7 176 aa13.67□□□□□ -0.22
PTBP1-216ENST00000590887 DDX56Q9NY93 547 aaKnown RBP13.67□□□□□ -0.22
PTBP1-216ENST00000590887 SSX2IPQ9Y2D8 614 aa13.67□□□□□ -0.22
PTBP1-216ENST00000590887 TET1Q8NFU7 2136 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 UQCRHLA0A096LP55 91 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 TCRBV5S1A1TA0A578 114 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 E5RJQ4 531 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 NCK2O43639 380 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 CEP104O60308 925 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 UQCRHP07919 91 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 KRT7P08729 469 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 GPD1P21695 349 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 FGFR3P22607 806 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 MCM3P25205 808 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 SDC4P31431 198 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 CTNNA1P35221 906 aaKnown RBP13.66□□□□□ -0.22
PTBP1-216ENST00000590887 PPM1AP35813 382 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 SLC11A1P49279 550 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 BCAR1P56945 870 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 BTG3Q14201 252 aaPredicted RBP13.66□□□□□ -0.22
PTBP1-216ENST00000590887 USP41Q3LFD5 358 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 CTXN3Q4LDR2 81 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 PPP1R15BQ5SWA1 713 aa13.66□□□□□ -0.22
PTBP1-216ENST00000590887 PRPF38BQ5VTL8 546 aaKnown RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms