RNA–Protein interactions for RNA: ENST00000590506.1

NEDD4L-229, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-229ENST00000590506 NDEL1Q9GZM8 345 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 GBA3Q9H227 469 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 SOX13Q9UN79 622 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 SSX2IPQ9Y2D8 614 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 GIT1Q9Y2X7 761 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 TIMM22Q9Y584 194 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 NOX1Q9Y5S8 564 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 ARAP2Q8WZ64 1704 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 GTPBP10A4D1E9 387 aaKnown RBP8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 H3BNX3 289 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 CASQ2O14958 399 aaPredicted RBP8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 TM9SF1O15321 606 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 PEX1O43933 1283 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 LPXNO60711 386 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 ETS1P14921 441 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 CDH3P22223 829 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 ADSSP30520 456 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 RCVRNP35243 200 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 PPARGP37231 505 aaPredicted RBP8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 IRX4P78413 519 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 DMPKQ09013 629 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 CAMK2BQ13554 666 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 NOP9Q86U38 636 aaKnown RBP8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 DZIP1Q86YF9 867 aaKnown RBP8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 ARID3BQ8IVW6 561 aaPredicted RBP8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 CCDC89Q8N998 374 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 GLIS1Q8NBF1 620 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 DDX17Q92841 729 aaKnown RBP8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 CCDC127Q96BQ5 260 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 RILPQ96NA2 401 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 BIRC8Q96P09 236 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 SSU72Q9NP77 194 aaKnown RBP8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 DCP1AQ9NPI6 582 aaPredicted RBP8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 SLC24A2Q9UI40 661 aa8.07□□□□□ -1.12
NEDD4L-229ENST00000590506 COL1A1P02452 1464 aaPredicted RBP8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 SF3B1O75533 1304 aaKnown RBP eCLIP8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 C10orf71Q711Q0 1435 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 CCDC195A0A1B0GUA6 201 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 GOLGA8SH3BPF8 625 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 GOLGA8MH3BSY2 632 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 PDXKO00764 312 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 ZBTB11O95625 1053 aaPredicted RBP8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 NELFEP18615 380 aaKnown RBP8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 S100A1P23297 94 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 RFC4P35249 363 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 KCNQ4P56696 695 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 SF3B3Q15393 1217 aaKnown RBP8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 DEPDC1Q5TB30 811 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 LMBRD2Q68DH5 695 aaPredicted RBP8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 SNRNP48Q6IEG0 339 aaKnown RBP8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 ALLCQ8N6M5 410 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 ACTRT2Q8TDY3 377 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 ZNF512Q96ME7 567 aaPredicted RBP8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 PIGSQ96S52 555 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 RUSC1Q9BVN2 902 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 ATAD3AQ9NVI7 634 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 KCNK4Q9NYG8 393 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 TMOD3Q9NYL9 352 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 APEX2Q9UBZ4 518 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 RAB26Q9ULW5 256 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 LAMB1P07942 1786 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 LAMB2P55268 1798 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 GOLGA8TH3BQL2 631 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 TMX2-CTNND1H3BSU7 103 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 SLC16A3O15427 465 aaKnown RBP8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 CCNT2O60583 730 aaKnown RBP8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 GCNT3O95395 438 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 RALAP11233 206 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 PHBP35232 272 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 TNNI2P48788 182 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 AQP5P55064 265 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 YWHAGP61981 247 aaKnown RBP eCLIP8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 CDKL1Q00532 357 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 CHRNDQ07001 517 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 TFDP1Q14186 410 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 EFHC2Q5JST6 749 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 HPS6Q86YV9 775 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 TTC13Q8NBP0 860 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 GRIN3AQ8TCU5 1115 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 JADE3Q92613 823 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 HAS1Q92839 578 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 ITPKCQ96DU7 683 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 TRIM11Q96F44 468 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 DYNLL2Q96FJ2 89 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 ACAP3Q96P50 834 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 PAFAH2Q99487 392 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 MECRQ9BV79 373 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 C1orf21Q9H246 121 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 ZNF287Q9HBT7 754 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 UBE2TQ9NPD8 197 aaPredicted RBP8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 OLFML3Q9NRN5 406 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 EBF1Q9UH73 591 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 PACSIN3Q9UKS6 424 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 CCPG1Q9ULG6 757 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 GNEQ9Y223 722 aaKnown RBP8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 POMPQ9Y244 141 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 TMA7Q9Y2S6 64 aaKnown RBP8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 NR2E3Q9Y5X4 410 aa8.06□□□□□ -1.12
NEDD4L-229ENST00000590506 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.05□□□□□ -1.12
NEDD4L-229ENST00000590506 WTIPA6NIX2 430 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms