RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 TNIP3Q96KP6 325 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 B3GNT5Q9BYG0 378 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 FOXQ1Q9C009 403 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 SMG9Q9H0W8 520 aaKnown RBP12.87□□□□□ -0.35
TPM4-212ENST00000590180 SDCBP2Q9H190 292 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 TMEM8AQ9HCN3 771 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 HEBP1Q9NRV9 189 aa12.87□□□□□ -0.35
TPM4-212ENST00000590180 TSC2P49815 1807 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 KANSL1LA0AUZ9 987 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 FAM170BA6NMN3 283 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 F8VP50 259 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 H0Y858 1186 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 TRIM66O15016 1216 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 GALR2O43603 387 aaPredicted RBP12.86□□□□□ -0.35
TPM4-212ENST00000590180 DCNP07585 359 aaKnown RBP12.86□□□□□ -0.35
TPM4-212ENST00000590180 CD44P16070 742 aaKnown RBP12.86□□□□□ -0.35
TPM4-212ENST00000590180 DDX6P26196 483 aaKnown RBP eCLIP12.86□□□□□ -0.35
TPM4-212ENST00000590180 PPP1R2P41236 205 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 NDST1P52848 882 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 LRRC63Q05C16 580 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 ORC1Q13415 861 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 UBXN2BQ14CS0 331 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 CAMK4Q16566 473 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 DCAF17Q5H9S7 520 aaPredicted RBP12.86□□□□□ -0.35
TPM4-212ENST00000590180 TPRG1Q6ZUI0 275 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 DENND5BQ6ZUT9 1274 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 MON1AQ86VX9 555 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 CMTM8Q8IZV2 173 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 CSGALNACT1Q8TDX6 532 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 SPATA17Q96L03 361 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 C8orf48Q96LL4 319 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 MYRFLQ96LU7 910 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 ZNF518BQ9C0D4 1074 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 TRPC7Q9HCX4 862 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 EHD2Q9NZN4 543 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 ZMYM5Q9UJ78 669 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 ATP8B3O60423 1300 aa12.86□□□□□ -0.35
TPM4-212ENST00000590180 PPP1R3GB7ZBB8 358 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 CHADO15335 359 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 SLC16A3O15427 465 aaKnown RBP12.85□□□□□ -0.35
TPM4-212ENST00000590180 LRRN2O75325 713 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 ABL1P00519 1130 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 CD58P19256 250 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 TRIM21P19474 475 aaKnown RBP12.85□□□□□ -0.35
TPM4-212ENST00000590180 WEE1P30291 646 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 MXI1P50539 228 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 STX17P56962 302 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 NOP14P78316 857 aaKnown RBP12.85□□□□□ -0.35
TPM4-212ENST00000590180 NHLH1Q02575 133 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 TCF15Q12870 199 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 IFRD2Q12894 506 aaPredicted RBP12.85□□□□□ -0.35
TPM4-212ENST00000590180 MORC3Q14149 939 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 CCDC40Q4G0X9 1142 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 WDR44Q5JSH3 913 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 ZNF852Q6ZMS4 543 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 FILIP1Q7Z7B0 1213 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 UNC93AQ86WB7 457 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 CELF5Q8N6W0 485 aaKnown RBP12.85□□□□□ -0.35
TPM4-212ENST00000590180 DTWD2Q8NBA8 298 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 TTC16Q8NEE8 873 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 TTC8Q8TAM2 541 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 BPIFB1Q8TDL5 484 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 NELFBQ8WX92 580 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 SEMA4DQ92854 862 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 ATOH1Q92858 354 aaPredicted RBP12.85□□□□□ -0.35
TPM4-212ENST00000590180 DNASE1L2Q92874 299 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 TRMT2BQ96GJ1 504 aaKnown RBP12.85□□□□□ -0.35
TPM4-212ENST00000590180 CEP295NLQ96MC4 621 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 LRRC3BQ96PB8 259 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 CYP2S1Q96SQ9 504 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 NELL2Q99435 816 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 ELOVL4Q9GZR5 314 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 IRF2BPLQ9H1B7 796 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 CYP3A43Q9HB55 503 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 APOBEC3GQ9HC16 384 aaKnown RBP12.85□□□□□ -0.35
TPM4-212ENST00000590180 THG1LQ9NWX6 298 aaKnown RBP12.85□□□□□ -0.35
TPM4-212ENST00000590180 RAB20Q9NX57 234 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 OBP2AQ9NY56 170 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 TRPM5Q9NZQ8 1165 aa12.85□□□□□ -0.35
TPM4-212ENST00000590180 ARMCX3Q9UH62 379 aaPredicted RBP12.85□□□□□ -0.35
TPM4-212ENST00000590180 MRPS17Q9Y2R5 130 aaKnown RBP12.85□□□□□ -0.35
TPM4-212ENST00000590180 MTF2Q9Y483 593 aaPredicted RBP12.85□□□□□ -0.35
TPM4-212ENST00000590180 SOBPA7XYQ1 873 aa12.84□□□□□ -0.35
TPM4-212ENST00000590180 MAN2B1O00754 1011 aa12.84□□□□□ -0.35
TPM4-212ENST00000590180 PRAMEF12O95522 483 aa12.84□□□□□ -0.35
TPM4-212ENST00000590180 HDCP19113 662 aa12.84□□□□□ -0.35
TPM4-212ENST00000590180 BMP6P22004 513 aa12.84□□□□□ -0.35
TPM4-212ENST00000590180 ASPAP45381 313 aa12.84□□□□□ -0.35
TPM4-212ENST00000590180 KPNA1P52294 538 aaPredicted RBP12.84□□□□□ -0.35
TPM4-212ENST00000590180 CACNA2D1P54289 1103 aa12.84□□□□□ -0.35
TPM4-212ENST00000590180 USP46P62068 366 aa12.84□□□□□ -0.35
TPM4-212ENST00000590180 ARHGAP29Q52LW3 1261 aa12.84□□□□□ -0.35
TPM4-212ENST00000590180 CC2D1AQ6P1N0 951 aaPredicted RBP12.84□□□□□ -0.35
TPM4-212ENST00000590180 CRYBG2Q8N1P7 616 aa12.84□□□□□ -0.35
TPM4-212ENST00000590180 FBXL13Q8NEE6 735 aa12.84□□□□□ -0.35
TPM4-212ENST00000590180 ZFYVE19Q96K21 471 aa12.84□□□□□ -0.35
TPM4-212ENST00000590180 CEP63Q96MT8 703 aa12.84□□□□□ -0.35
TPM4-212ENST00000590180 KCNK16Q96T55 309 aa12.84□□□□□ -0.35
TPM4-212ENST00000590180 NT5C1AQ9BXI3 368 aa12.84□□□□□ -0.35
TPM4-212ENST00000590180 DNAI2Q9GZS0 605 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms