RNA–Protein interactions for RNA: ENST00000590098.1

PRKCSH-211, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 795 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-211ENST00000590098 ARSAP15289 507 aa19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 LMO2P25791 158 aa19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 HOXA6P31267 233 aa19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 PSMC1P62191 440 aaKnown RBP19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 SNRPFP62306 86 aaKnown RBP19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 CYP27A1Q02318 531 aa19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 FAM160A1Q05DH4 1040 aa19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 SPEM2Q0P670 501 aa19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 MTF1Q14872 753 aa19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 FOXD4L6Q3SYB3 417 aaPredicted RBP19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 TMEM196Q5HYL7 178 aa19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 VSTM1Q6UX27 236 aa19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 FOXD4L3Q6VB84 417 aaPredicted RBP19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 UNC13DQ70J99 1090 aa19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 HS2ST1Q7LGA3 356 aa19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 TRAPPC11Q7Z392 1133 aa19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 LIMS2Q7Z4I7 341 aa19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 CPA6Q8N4T0 437 aa19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 KBTBD7Q8WVZ9 684 aa19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 CYP2S1Q96SQ9 504 aa19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 SNX25Q9H3E2 840 aa19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 FAM13BQ9NYF5 915 aa19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 UBE4BO95155 1302 aa19.19■□□□□ 0.66
PRKCSH-211ENST00000590098 NCOR2Q9Y618 2525 aa19.18■□□□□ 0.66
PRKCSH-211ENST00000590098 OTOL1A6NHN0 477 aaPredicted RBP19.18■□□□□ 0.66
PRKCSH-211ENST00000590098 TRDMT1O14717 391 aaKnown RBP19.18■□□□□ 0.66
PRKCSH-211ENST00000590098 CLIC2O15247 247 aa19.18■□□□□ 0.66
PRKCSH-211ENST00000590098 TGFB1I1O43294 461 aa19.18■□□□□ 0.66
PRKCSH-211ENST00000590098 LRP3O75074 770 aa19.18■□□□□ 0.66
PRKCSH-211ENST00000590098 WARSP23381 471 aaKnown RBP19.18■□□□□ 0.66
PRKCSH-211ENST00000590098 ANXA13P27216 316 aa19.18■□□□□ 0.66
PRKCSH-211ENST00000590098 GRIK1P39086 918 aa19.18■□□□□ 0.66
PRKCSH-211ENST00000590098 CYP2J2P51589 502 aa19.18■□□□□ 0.66
PRKCSH-211ENST00000590098 SRSF5Q13243 272 aaKnown RBP19.18■□□□□ 0.66
PRKCSH-211ENST00000590098 FSTL4Q6MZW2 842 aa19.18■□□□□ 0.66
PRKCSH-211ENST00000590098 CEP68Q76N32 757 aa19.18■□□□□ 0.66
PRKCSH-211ENST00000590098 NELFCDQ8IXH7 590 aa19.18■□□□□ 0.66
PRKCSH-211ENST00000590098 XXYLT1Q8NBI6 393 aa19.18■□□□□ 0.66
PRKCSH-211ENST00000590098 SNX21Q969T3 373 aa19.18■□□□□ 0.66
PRKCSH-211ENST00000590098 MYLPFQ96A32 169 aa19.18■□□□□ 0.66
PRKCSH-211ENST00000590098 CCDC127Q96BQ5 260 aa19.18■□□□□ 0.66
PRKCSH-211ENST00000590098 SPATA17Q96L03 361 aa19.18■□□□□ 0.66
PRKCSH-211ENST00000590098 CEP295NLQ96MC4 621 aa19.18■□□□□ 0.66
PRKCSH-211ENST00000590098 DUS2Q9NX74 493 aaKnown RBP19.18■□□□□ 0.66
PRKCSH-211ENST00000590098 EHD2Q9NZN4 543 aa19.18■□□□□ 0.66
PRKCSH-211ENST00000590098 HDCP19113 662 aa19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 DRD1P21728 446 aa19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 BDNFP23560 247 aa19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 GNL1P36915 607 aaPredicted RBP19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 ME1P48163 572 aa19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 IFNAR2P48551 515 aa19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 PDE6CP51160 858 aa19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 TNNC1P63316 161 aa19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 CYP24A1Q07973 514 aa19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 KCNB1Q14721 858 aa19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 PSMD6Q15008 389 aa19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 WDR5BQ86VZ2 330 aa19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 HSCBQ8IWL3 235 aa19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 ARL14EPQ8N8R7 260 aaPredicted RBP19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 RIN3Q8TB24 985 aa19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 OSCP1Q8WVF1 389 aa19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 SCFD1Q8WVM8 642 aa19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 ATP2A3Q93084 1043 aa19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 SLC22A12Q96S37 553 aa19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 CGRRF1Q99675 332 aa19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 BLZF1Q9H2G9 400 aa19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 CRTAC1Q9NQ79 661 aa19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 SLC8A2Q9UPR5 921 aa19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 PTPRDP23468 1912 aa19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 SPTBN2O15020 2390 aa19.17■□□□□ 0.66
PRKCSH-211ENST00000590098 SPAG17Q6Q759 2223 aa19.16■□□□□ 0.66
PRKCSH-211ENST00000590098 TRIM66O15016 1216 aa19.16■□□□□ 0.66
PRKCSH-211ENST00000590098 CST3P01034 146 aaPredicted RBP19.16■□□□□ 0.66
PRKCSH-211ENST00000590098 ZSCAN22P10073 491 aaPredicted RBP19.16■□□□□ 0.66
PRKCSH-211ENST00000590098 GALK1P51570 392 aa19.16■□□□□ 0.66
PRKCSH-211ENST00000590098 ATXN1P54253 815 aaKnown RBP19.16■□□□□ 0.66
PRKCSH-211ENST00000590098 TRPC3Q13507 836 aa19.16■□□□□ 0.66
PRKCSH-211ENST00000590098 ZNF77Q15935 545 aa19.16■□□□□ 0.66
PRKCSH-211ENST00000590098 DENND5BQ6ZUT9 1274 aa19.16■□□□□ 0.66
PRKCSH-211ENST00000590098 OR6B3Q8NGW1 331 aa19.16■□□□□ 0.66
PRKCSH-211ENST00000590098 MYCBPAPQ8TBZ2 947 aa19.16■□□□□ 0.66
PRKCSH-211ENST00000590098 CHFRQ96EP1 664 aa19.16■□□□□ 0.66
PRKCSH-211ENST00000590098 P2RY13Q9BPV8 354 aa19.16■□□□□ 0.66
PRKCSH-211ENST00000590098 ECT2Q9H8V3 914 aa19.16■□□□□ 0.66
PRKCSH-211ENST00000590098 TRPM5Q9NZQ8 1165 aa19.16■□□□□ 0.66
PRKCSH-211ENST00000590098 CGNQ9P2M7 1197 aaKnown RBP19.16■□□□□ 0.66
PRKCSH-211ENST00000590098 SDK1Q7Z5N4 2213 aa19.16■□□□□ 0.66
PRKCSH-211ENST00000590098 HELZP42694 1942 aaKnown RBP19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 PVALEFA0A1B0GWK0 134 aa19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 C2orf78A6NCI8 922 aa19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 RNF40O75150 1001 aa19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 TACC1O75410 805 aa19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 F13A1P00488 732 aa19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 EGFP01133 1207 aa19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 FAM163BP0C2L3 166 aa19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 CASP1P29466 404 aa19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 GJA4P35212 333 aa19.15■□□□□ 0.66
PRKCSH-211ENST00000590098 AFMP43652 599 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms