RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 ZNF18P17022 549 aa22.62■■□□□ 1.21
ATG4D-212ENST00000590096 PON1P27169 355 aa22.62■■□□□ 1.21
ATG4D-212ENST00000590096 RAD23BP54727 409 aa22.62■■□□□ 1.21
ATG4D-212ENST00000590096 EPHA5P54756 1037 aa22.62■■□□□ 1.21
ATG4D-212ENST00000590096 SLC5A9Q2M3M2 681 aa22.62■■□□□ 1.21
ATG4D-212ENST00000590096 PHLDB3Q6NSJ2 640 aa22.62■■□□□ 1.21
ATG4D-212ENST00000590096 TMEM270Q6UE05 265 aa22.62■■□□□ 1.21
ATG4D-212ENST00000590096 ENOSF1Q7L5Y1 443 aa22.62■■□□□ 1.21
ATG4D-212ENST00000590096 FUKQ8N0W3 1084 aa22.62■■□□□ 1.21
ATG4D-212ENST00000590096 UBR7Q8N806 425 aa22.62■■□□□ 1.21
ATG4D-212ENST00000590096 SLC4A11Q8NBS3 891 aa22.62■■□□□ 1.21
ATG4D-212ENST00000590096 ITFG1Q8TB96 612 aa22.62■■□□□ 1.21
ATG4D-212ENST00000590096 KAT5Q92993 513 aa22.62■■□□□ 1.21
ATG4D-212ENST00000590096 CYFIP2Q96F07 1278 aa22.62■■□□□ 1.21
ATG4D-212ENST00000590096 C8orf48Q96LL4 319 aa22.62■■□□□ 1.21
ATG4D-212ENST00000590096 CEP295NLQ96MC4 621 aa22.62■■□□□ 1.21
ATG4D-212ENST00000590096 KRT82Q9NSB4 513 aa22.62■■□□□ 1.21
ATG4D-212ENST00000590096 APEX2Q9UBZ4 518 aa22.62■■□□□ 1.21
ATG4D-212ENST00000590096 LIMA1Q9UHB6 759 aaKnown RBP22.62■■□□□ 1.21
ATG4D-212ENST00000590096 MAGED2Q9UNF1 606 aaPredicted RBP22.62■■□□□ 1.21
ATG4D-212ENST00000590096 ZFP37Q9Y6Q3 630 aaPredicted RBP22.62■■□□□ 1.21
ATG4D-212ENST00000590096 F8VP50 259 aa22.61■■□□□ 1.21
ATG4D-212ENST00000590096 AP1G2O75843 785 aa22.61■■□□□ 1.21
ATG4D-212ENST00000590096 ADORA2BP29275 332 aa22.61■■□□□ 1.21
ATG4D-212ENST00000590096 COPB1P53618 953 aaKnown RBP22.61■■□□□ 1.21
ATG4D-212ENST00000590096 MFAP3P55082 362 aa22.61■■□□□ 1.21
ATG4D-212ENST00000590096 PRSS36Q5K4E3 855 aa22.61■■□□□ 1.21
ATG4D-212ENST00000590096 FKBP15Q5T1M5 1219 aa22.61■■□□□ 1.21
ATG4D-212ENST00000590096 TMC8Q8IU68 726 aa22.61■■□□□ 1.21
ATG4D-212ENST00000590096 ZDHHC14Q8IZN3 488 aa22.61■■□□□ 1.21
ATG4D-212ENST00000590096 ING5Q8WYH8 240 aa22.61■■□□□ 1.21
ATG4D-212ENST00000590096 SPATA17Q96L03 361 aa22.61■■□□□ 1.21
ATG4D-212ENST00000590096 GCNAQ96QF7 691 aa22.61■■□□□ 1.21
ATG4D-212ENST00000590096 MYADMQ96S97 322 aa22.61■■□□□ 1.21
ATG4D-212ENST00000590096 HNRNPABQ99729 332 aaKnown RBP22.61■■□□□ 1.21
ATG4D-212ENST00000590096 UXTQ9UBK9 157 aaPredicted RBP22.61■■□□□ 1.21
ATG4D-212ENST00000590096 CDH7Q9ULB5 785 aa22.61■■□□□ 1.21
ATG4D-212ENST00000590096 MYH10P35580 1976 aa22.6■■□□□ 1.21
ATG4D-212ENST00000590096 SLC38A8A6NNN8 435 aa22.6■■□□□ 1.21
ATG4D-212ENST00000590096 MICAL2O94851 1124 aa22.6■■□□□ 1.21
ATG4D-212ENST00000590096 TPM4P67936 248 aa22.6■■□□□ 1.21
ATG4D-212ENST00000590096 PAQR9Q6ZVX9 377 aa22.6■■□□□ 1.21
ATG4D-212ENST00000590096 STKLD1Q8NE28 680 aa22.6■■□□□ 1.21
ATG4D-212ENST00000590096 FGF13Q92913 245 aa22.6■■□□□ 1.21
ATG4D-212ENST00000590096 JAKMIP2Q96AA8 810 aa22.6■■□□□ 1.21
ATG4D-212ENST00000590096 TCEAL4Q96EI5 215 aa22.6■■□□□ 1.21
ATG4D-212ENST00000590096 KREMEN1Q96MU8 473 aa22.6■■□□□ 1.21
ATG4D-212ENST00000590096 LRRC3Q9BY71 257 aa22.6■■□□□ 1.21
ATG4D-212ENST00000590096 HSD3B7Q9H2F3 369 aa22.6■■□□□ 1.21
ATG4D-212ENST00000590096 ZNF334Q9HCZ1 680 aaPredicted RBP22.6■■□□□ 1.21
ATG4D-212ENST00000590096 DMAP1Q9NPF5 467 aaPredicted RBP22.6■■□□□ 1.21
ATG4D-212ENST00000590096 NOL4O94818 638 aa22.59■■□□□ 1.21
ATG4D-212ENST00000590096 FAM200BP0CF97 657 aa22.59■■□□□ 1.21
ATG4D-212ENST00000590096 CD19P15391 556 aa22.59■■□□□ 1.21
ATG4D-212ENST00000590096 CEBPBP17676 345 aa22.59■■□□□ 1.21
ATG4D-212ENST00000590096 ACO1P21399 889 aaKnown RBP22.59■■□□□ 1.21
ATG4D-212ENST00000590096 GABRR2P28476 465 aa22.59■■□□□ 1.21
ATG4D-212ENST00000590096 CDC25CP30307 473 aa22.59■■□□□ 1.21
ATG4D-212ENST00000590096 CCR2P41597 374 aa22.59■■□□□ 1.21
ATG4D-212ENST00000590096 CACNA2D1P54289 1103 aa22.59■■□□□ 1.21
ATG4D-212ENST00000590096 MTMR3Q13615 1198 aa22.59■■□□□ 1.21
ATG4D-212ENST00000590096 IQCB1Q15051 598 aa22.59■■□□□ 1.21
ATG4D-212ENST00000590096 PPP1R26Q5T8A7 1209 aaPredicted RBP22.59■■□□□ 1.21
ATG4D-212ENST00000590096 DENND5BQ6ZUT9 1274 aa22.59■■□□□ 1.21
ATG4D-212ENST00000590096 ATXN3LQ9H3M9 355 aa22.59■■□□□ 1.21
ATG4D-212ENST00000590096 CBX8Q9HC52 389 aa22.59■■□□□ 1.21
ATG4D-212ENST00000590096 EHD2Q9NZN4 543 aa22.59■■□□□ 1.21
ATG4D-212ENST00000590096 EPS15L1Q9UBC2 864 aa22.59■■□□□ 1.21
ATG4D-212ENST00000590096 DOCK8Q8NF50 2099 aa22.59■■□□□ 1.21
ATG4D-212ENST00000590096 A0A1W2PRU2 124 aa22.58■■□□□ 1.21
ATG4D-212ENST00000590096 PAEPP09466 180 aa22.58■■□□□ 1.21
ATG4D-212ENST00000590096 LAMP2P13473 410 aa22.58■■□□□ 1.21
ATG4D-212ENST00000590096 ATP1A3P13637 1013 aa22.58■■□□□ 1.21
ATG4D-212ENST00000590096 KRT5P13647 590 aa22.58■■□□□ 1.21
ATG4D-212ENST00000590096 HMGA1P17096 107 aaKnown RBP22.58■■□□□ 1.21
ATG4D-212ENST00000590096 ARHGAP44Q17R89 818 aa22.58■■□□□ 1.21
ATG4D-212ENST00000590096 SGO2Q562F6 1265 aa22.58■■□□□ 1.21
ATG4D-212ENST00000590096 GJB7Q6PEY0 223 aa22.58■■□□□ 1.21
ATG4D-212ENST00000590096 NPAS3Q8IXF0 933 aa22.58■■□□□ 1.21
ATG4D-212ENST00000590096 RBBP8NLQ8NC74 664 aaPredicted RBP22.58■■□□□ 1.21
ATG4D-212ENST00000590096 SHKBP1Q8TBC3 707 aa22.58■■□□□ 1.21
ATG4D-212ENST00000590096 TRMT2BQ96GJ1 504 aaKnown RBP22.58■■□□□ 1.21
ATG4D-212ENST00000590096 CD320Q9NPF0 282 aa22.58■■□□□ 1.21
ATG4D-212ENST00000590096 GDE1Q9NZC3 331 aa22.58■■□□□ 1.21
ATG4D-212ENST00000590096 LIMD1Q9UGP4 676 aa22.58■■□□□ 1.21
ATG4D-212ENST00000590096 KIAA1257Q9ULG3 409 aa22.58■■□□□ 1.21
ATG4D-212ENST00000590096 LRRC10BA6NIK2 292 aa22.57■■□□□ 1.2
ATG4D-212ENST00000590096 VDRP11473 427 aa22.57■■□□□ 1.2
ATG4D-212ENST00000590096 GJA1P17302 382 aa22.57■■□□□ 1.2
ATG4D-212ENST00000590096 MAP3K7CLP57077 242 aa22.57■■□□□ 1.2
ATG4D-212ENST00000590096 APBA1Q02410 837 aa22.57■■□□□ 1.2
ATG4D-212ENST00000590096 TEAD2Q15562 447 aa22.57■■□□□ 1.2
ATG4D-212ENST00000590096 ARHGAP15Q53QZ3 475 aa22.57■■□□□ 1.2
ATG4D-212ENST00000590096 GAREM2Q75VX8 874 aa22.57■■□□□ 1.2
ATG4D-212ENST00000590096 RNF135Q8IUD6 432 aa22.57■■□□□ 1.2
ATG4D-212ENST00000590096 MCRS1Q96EZ8 462 aa22.57■■□□□ 1.2
ATG4D-212ENST00000590096 KCNK16Q96T55 309 aa22.57■■□□□ 1.2
ATG4D-212ENST00000590096 LSM14BQ9BX40 385 aaKnown RBP22.57■■□□□ 1.2
ATG4D-212ENST00000590096 SLITRK6Q9H5Y7 841 aa22.57■■□□□ 1.2
ATG4D-212ENST00000590096 SIX2Q9NPC8 291 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms