RNA–Protein interactions for RNA: ENST00000590000.1

SAFB2-205, Transcript of scaffold attachment factor B2, humanhuman

TSL 2

Gene SAFB2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-205ENST00000590000 PCDHB5Q9Y5E4 795 aa15.2■□□□□ 0.02
SAFB2-205ENST00000590000 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.2■□□□□ 0.02
SAFB2-205ENST00000590000 PATE3B3GLJ2 98 aa15.19■□□□□ 0.02
SAFB2-205ENST00000590000 ITGB3P05106 788 aa15.19■□□□□ 0.02
SAFB2-205ENST00000590000 OPRD1P41143 372 aa15.19■□□□□ 0.02
SAFB2-205ENST00000590000 USP46P62068 366 aa15.19■□□□□ 0.02
SAFB2-205ENST00000590000 GRSF1Q12849 480 aaKnown RBP eCLIP15.19■□□□□ 0.02
SAFB2-205ENST00000590000 ZNF268Q14587 947 aaPredicted RBP15.19■□□□□ 0.02
SAFB2-205ENST00000590000 RESP18Q5W5W9 173 aa15.19■□□□□ 0.02
SAFB2-205ENST00000590000 IL31Q6EBC2 164 aa15.19■□□□□ 0.02
SAFB2-205ENST00000590000 IQUBQ8NA54 791 aa15.19■□□□□ 0.02
SAFB2-205ENST00000590000 GLIS3Q8NEA6 775 aa15.19■□□□□ 0.02
SAFB2-205ENST00000590000 SPATA32Q96LK8 384 aa15.19■□□□□ 0.02
SAFB2-205ENST00000590000 MYRFLQ96LU7 910 aa15.19■□□□□ 0.02
SAFB2-205ENST00000590000 P2RY13Q9BPV8 354 aa15.19■□□□□ 0.02
SAFB2-205ENST00000590000 TMEM121BQ9BXQ6 578 aaPredicted RBP15.19■□□□□ 0.02
SAFB2-205ENST00000590000 MRPL44Q9H9J2 332 aaKnown RBP15.19■□□□□ 0.02
SAFB2-205ENST00000590000 PANK4Q9NVE7 773 aa15.19■□□□□ 0.02
SAFB2-205ENST00000590000 THG1LQ9NWX6 298 aaKnown RBP15.19■□□□□ 0.02
SAFB2-205ENST00000590000 DDX43Q9NXZ2 648 aaKnown RBP15.19■□□□□ 0.02
SAFB2-205ENST00000590000 FAM13BQ9NYF5 915 aa15.19■□□□□ 0.02
SAFB2-205ENST00000590000 DSEQ9UL01 958 aa15.19■□□□□ 0.02
SAFB2-205ENST00000590000 AGAP1Q9UPQ3 857 aa15.19■□□□□ 0.02
SAFB2-205ENST00000590000 MYO18AQ92614 2054 aaKnown RBP15.18■□□□□ 0.02
SAFB2-205ENST00000590000 PKD1L2Q7Z442 2459 aa15.18■□□□□ 0.02
SAFB2-205ENST00000590000 GOLGA8IPA6NC78 632 aa15.18■□□□□ 0.02
SAFB2-205ENST00000590000 GOLGA8JA6NMD2 632 aa15.18■□□□□ 0.02
SAFB2-205ENST00000590000 GABRDO14764 452 aa15.18■□□□□ 0.02
SAFB2-205ENST00000590000 CCDC192P0DO97 292 aa15.18■□□□□ 0.02
SAFB2-205ENST00000590000 SPINK2P20155 84 aa15.18■□□□□ 0.02
SAFB2-205ENST00000590000 PAX3P23760 479 aa15.18■□□□□ 0.02
SAFB2-205ENST00000590000 CASP1P29466 404 aa15.18■□□□□ 0.02
SAFB2-205ENST00000590000 AVPR1AP37288 418 aa15.18■□□□□ 0.02
SAFB2-205ENST00000590000 DMC1Q14565 340 aa15.18■□□□□ 0.02
SAFB2-205ENST00000590000 INTS6LQ5JSJ4 861 aaKnown RBP15.18■□□□□ 0.02
SAFB2-205ENST00000590000 LMBRD2Q68DH5 695 aaPredicted RBP15.18■□□□□ 0.02
SAFB2-205ENST00000590000 METTL23Q86XA0 190 aa15.18■□□□□ 0.02
SAFB2-205ENST00000590000 BRSK2Q8IWQ3 736 aa15.18■□□□□ 0.02
SAFB2-205ENST00000590000 THEM5Q8N1Q8 247 aa15.18■□□□□ 0.02
SAFB2-205ENST00000590000 ARL14EPQ8N8R7 260 aaPredicted RBP15.18■□□□□ 0.02
SAFB2-205ENST00000590000 HPS3Q969F9 1004 aa15.18■□□□□ 0.02
SAFB2-205ENST00000590000 GCNAQ96QF7 691 aa15.18■□□□□ 0.02
SAFB2-205ENST00000590000 CBWD1Q9BRT8 395 aa15.18■□□□□ 0.02
SAFB2-205ENST00000590000 FAM213AQ9BRX8 229 aa15.18■□□□□ 0.02
SAFB2-205ENST00000590000 GDPD2Q9HCC8 539 aa15.18■□□□□ 0.02
SAFB2-205ENST00000590000 TMEM30AQ9NV96 361 aa15.18■□□□□ 0.02
SAFB2-205ENST00000590000 ANGPTL2Q9UKU9 493 aa15.18■□□□□ 0.02
SAFB2-205ENST00000590000 SLC8A2Q9UPR5 921 aa15.18■□□□□ 0.02
SAFB2-205ENST00000590000 A0A1B0GVL5 298 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 LNP1A1A4G5 178 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 BCLAF3A2AJT9 711 aaKnown RBP15.17■□□□□ 0.02
SAFB2-205ENST00000590000 C1QTNF9BB2RNN3 333 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 K7EQS6 105 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 SCAMP3O14828 347 aaKnown RBP15.17■□□□□ 0.02
SAFB2-205ENST00000590000 AKAP3O75969 853 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 C1QTNF9P0C862 333 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 CSH1P0DML2 217 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 CSH2P0DML3 217 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 GAP43P17677 238 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 LMO2P25791 158 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 DDX6P26196 483 aaKnown RBP eCLIP15.17■□□□□ 0.02
SAFB2-205ENST00000590000 AFMP43652 599 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 KRT85P78386 507 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 TFAMQ00059 246 aaKnown RBP15.17■□□□□ 0.02
SAFB2-205ENST00000590000 FAM160A1Q05DH4 1040 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 BFSP1Q12934 665 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 TAF12Q16514 161 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 SOWAHAQ2M3V2 549 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 SV2CQ496J9 727 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 PSAPL1Q6NUJ1 521 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 SYT13Q7L8C5 426 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 LIMS2Q7Z4I7 341 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 GRAMD1CQ8IYS0 662 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 DCP1BQ8IZD4 617 aaKnown RBP15.17■□□□□ 0.02
SAFB2-205ENST00000590000 CAMKK1Q8N5S9 505 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 FRMD1Q8N878 549 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 C12orf50Q8NA57 414 aaPredicted RBP15.17■□□□□ 0.02
SAFB2-205ENST00000590000 OSCP1Q8WVF1 389 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 KBTBD7Q8WVZ9 684 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 POMGNT1Q8WZA1 660 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 MRPS31Q92665 395 aaKnown RBP15.17■□□□□ 0.02
SAFB2-205ENST00000590000 CD101Q93033 1021 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 TRMT2BQ96GJ1 504 aaKnown RBP15.17■□□□□ 0.02
SAFB2-205ENST00000590000 TPSD1Q9BZJ3 242 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 BLZF1Q9H2G9 400 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 KIF9Q9HAQ2 790 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 TRPC7Q9HCX4 862 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 CRTAC1Q9NQ79 661 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 KBTBD4Q9NVX7 518 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 SERTAD1Q9UHV2 236 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 PCDHGA5Q9Y5G8 931 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 BAHCC1Q9P281 2608 aa15.17■□□□□ 0.02
SAFB2-205ENST00000590000 PI4KAP42356 2102 aa15.16■□□□□ 0.02
SAFB2-205ENST00000590000 C4orf47A7E2U8 309 aa15.16■□□□□ 0.02
SAFB2-205ENST00000590000 TULP1O00294 542 aaPredicted RBP15.16■□□□□ 0.02
SAFB2-205ENST00000590000 CDX4O14627 284 aaPredicted RBP15.16■□□□□ 0.02
SAFB2-205ENST00000590000 PRPF6O94906 941 aaKnown RBP15.16■□□□□ 0.02
SAFB2-205ENST00000590000 HOXB3P14651 431 aaPredicted RBP15.16■□□□□ 0.02
SAFB2-205ENST00000590000 DRD1P21728 446 aa15.16■□□□□ 0.02
SAFB2-205ENST00000590000 CACNA2D1P54289 1103 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms