RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 HMG20AQ9NP66 347 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 CYP27B1O15528 508 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 PHGDHO43175 533 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 RMDN1Q96DB5 314 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 APOPT1Q96IL0 206 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 RMDN3Q96TC7 470 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 GRIP2Q9C0E4 1043 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 KCNK4Q9NYG8 393 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 CSADQ9Y600 493 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 FAM237AA0A1B0GTK4 181 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 DNALI1O14645 258 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 MYBL2P10244 700 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 NFKBIAP25963 317 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 YWHABP31946 246 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 RGS21Q2M5E4 152 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 TCP10LQ8TDR4 215 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 DLG3Q92796 817 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 CCDC126Q96EE4 140 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 C17orf80Q9BSJ5 609 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 COA1Q9GZY4 146 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 RMI1Q9H9A7 625 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 GABBR1Q9UBS5 961 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 BCS1LQ9Y276 419 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 FAM32AQ9Y421 112 aaKnown RBP15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 ATP6V1E1P36543 226 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 PHKA2P46019 1235 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 SGSM1Q2NKQ1 1148 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 TJAP1Q5JTD0 557 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 BEST2Q8NFU1 509 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 RNF217Q8TC41 542 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 KIAA1683Q9H0B3 1180 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 NEUROG2Q9H2A3 272 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 FAM217BQ9NTX9 383 aaPredicted RBP15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 THAP1Q9NVV9 213 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 RRN3Q9NYV6 651 aa15.17■□□□□ 0.02
SMARCA4-214ENST00000589677 EIF2S1P05198 315 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 NUDT17P0C025 328 aa15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 CHRNB3Q05901 458 aa15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 ITGA9Q13797 1035 aa15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 ZC2HC1CQ53FD0 456 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 TFDP3Q5H9I0 405 aa15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 RAD21L1Q9H4I0 556 aa15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 TOPORSQ9NS56 1045 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 TNPO2O14787 897 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 HUS1O60921 280 aa15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 RFX5P48382 616 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 CCNHP51946 323 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 AMPD2Q01433 879 aa15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 PDK1Q15118 436 aa15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 KYAT1Q16773 422 aa15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 NT5DC3Q86UY8 548 aa15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 CDV3Q9UKY7 258 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 UBA6A0AVT1 1052 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 HEATR9A2RTY3 570 aa15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 SNAP23O00161 211 aa15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 FASP25445 335 aa15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 XIAPP98170 497 aa15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 NAT9Q9BTE0 207 aa15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 CASS4Q9NQ75 786 aa15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 CYLDQ9NQC7 956 aa15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 GH2P01242 217 aa15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 EFNA5P52803 228 aa15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 NCOA4Q13772 614 aa15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 TRIM25Q14258 630 aaKnown RBP15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 PDK3Q15120 406 aa15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 TRPC4APQ8TEL6 797 aa15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 CHORDC1Q9UHD1 332 aaPredicted RBP15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 FLT1P17948 1338 aa15.16■□□□□ 0.02
SMARCA4-214ENST00000589677 FKBP9O95302 570 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 NCALDP61601 193 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 DGUOKQ16854 277 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 LMBRD2Q68DH5 695 aaPredicted RBP15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 FKBP9P1Q75LS8 142 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 EPAS1Q99814 870 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 ZBED2Q9BTP6 218 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 DCLK3Q9C098 648 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 TNS3Q68CZ2 1445 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 ST13P50502 369 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 LRRC39Q96DD0 335 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 AGAP3Q96P47 875 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 ECSITQ9BQ95 431 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 TRIM54Q9BYV2 358 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 ZNF302Q9NR11 478 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 AGPAT3Q9NRZ7 376 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 SLC39A10Q9ULF5 831 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 TLR2O60603 784 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 LCA5LO95447 670 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 SGPL1O95470 568 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 ZNF543Q08ER8 600 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 LAMC2Q13753 1193 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 BLMHQ13867 455 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 DSTYKQ6XUX3 929 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 FAM196AQ6ZSG2 479 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 ILDR1Q86SU0 546 aaPredicted RBP15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 OTUB1Q96FW1 271 aaPredicted RBP15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 PCDH9Q9HC56 1237 aa15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 SARS2Q9NP81 518 aaKnown RBP15.15■□□□□ 0.02
SMARCA4-214ENST00000589677 RIMBP3CA6NJZ7 1639 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms