RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 ZNF143P52747 638 aaPredicted RBP16.05■□□□□ 0.16
MBD1-217ENST00000588937 ZBTB6Q15916 424 aa16.05■□□□□ 0.16
MBD1-217ENST00000588937 TAZQ16635 292 aa16.05■□□□□ 0.16
MBD1-217ENST00000588937 TXNRD3NBQ6F5E7 133 aa16.05■□□□□ 0.16
MBD1-217ENST00000588937 HIBCHQ6NVY1 386 aaPredicted RBP16.05■□□□□ 0.16
MBD1-217ENST00000588937 DPH6Q7L8W6 267 aa16.05■□□□□ 0.16
MBD1-217ENST00000588937 UNC93AQ86WB7 457 aa16.05■□□□□ 0.16
MBD1-217ENST00000588937 REM2Q8IYK8 340 aaPredicted RBP16.05■□□□□ 0.16
MBD1-217ENST00000588937 CENPTQ96BT3 561 aa16.05■□□□□ 0.16
MBD1-217ENST00000588937 SERPINB12Q96P63 405 aa16.05■□□□□ 0.16
MBD1-217ENST00000588937 FAM118BQ9BPY3 351 aa16.05■□□□□ 0.16
MBD1-217ENST00000588937 ZFYVE28Q9HCC9 887 aa16.05■□□□□ 0.16
MBD1-217ENST00000588937 CNTN3Q9P232 1028 aa16.05■□□□□ 0.16
MBD1-217ENST00000588937 ABT1Q9ULW3 272 aaKnown RBP16.05■□□□□ 0.16
MBD1-217ENST00000588937 UBQLN1Q9UMX0 589 aaKnown RBP16.05■□□□□ 0.16
MBD1-217ENST00000588937 SNX9Q9Y5X1 595 aa16.05■□□□□ 0.16
MBD1-217ENST00000588937 C3orf70A6NLC5 250 aaPredicted RBP16.04■□□□□ 0.16
MBD1-217ENST00000588937 HAS3O00219 553 aa16.04■□□□□ 0.16
MBD1-217ENST00000588937 DNALI1O14645 258 aaPredicted RBP16.04■□□□□ 0.16
MBD1-217ENST00000588937 GNAT1P11488 350 aa16.04■□□□□ 0.16
MBD1-217ENST00000588937 GPD1P21695 349 aa16.04■□□□□ 0.16
MBD1-217ENST00000588937 OASLQ15646 514 aaKnown RBP16.04■□□□□ 0.16
MBD1-217ENST00000588937 P3H1Q32P28 736 aa16.04■□□□□ 0.16
MBD1-217ENST00000588937 PRAMEF19Q5SWL8 479 aa16.04■□□□□ 0.16
MBD1-217ENST00000588937 OLFML2BQ68BL8 750 aa16.04■□□□□ 0.16
MBD1-217ENST00000588937 ALKAL1Q6UXT8 129 aa16.04■□□□□ 0.16
MBD1-217ENST00000588937 TMEM130Q8N3G9 435 aa16.04■□□□□ 0.16
MBD1-217ENST00000588937 ZCCHC9Q8N567 271 aaKnown RBP16.04■□□□□ 0.16
MBD1-217ENST00000588937 KCTD6Q8NC69 237 aa16.04■□□□□ 0.16
MBD1-217ENST00000588937 UBA3Q8TBC4 463 aa16.04■□□□□ 0.16
MBD1-217ENST00000588937 NCAPGQ9BPX3 1015 aa16.04■□□□□ 0.16
MBD1-217ENST00000588937 CCDC77Q9BR77 488 aa16.04■□□□□ 0.16
MBD1-217ENST00000588937 CNPY3Q9BT09 278 aa16.04■□□□□ 0.16
MBD1-217ENST00000588937 EIF2AQ9BY44 585 aaKnown RBP16.04■□□□□ 0.16
MBD1-217ENST00000588937 USP18Q9UMW8 372 aa16.04■□□□□ 0.16
MBD1-217ENST00000588937 CA12O43570 354 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 ACSL3O95573 720 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 ALDH1A1P00352 501 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 RGS2P41220 211 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 ARSEP51690 589 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 ADAM17P78536 824 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 GOLGA7BQ2TAP0 167 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 OR6B2Q6IFH4 312 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 BBS12Q6ZW61 710 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 PCGF5Q86SE9 256 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 NLRP14Q86W24 1093 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 NME8Q8N427 588 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 ARFGAP1Q8N6T3 406 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 EMC1Q8N766 993 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 CMASQ8NFW8 434 aaPredicted RBP16.03■□□□□ 0.16
MBD1-217ENST00000588937 ZMAT2Q96NC0 199 aaKnown RBP16.03■□□□□ 0.16
MBD1-217ENST00000588937 PCDH9Q9HC56 1237 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 HESX1Q9UBX0 185 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 TPX2Q9ULW0 747 aaKnown RBP16.03■□□□□ 0.16
MBD1-217ENST00000588937 GMNCA6NCL1 334 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 SMIM23A6NLE4 172 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 DCDC2CA8MYV0 355 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 E7EVH7 732 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 TCEA3O75764 348 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 RECQL4O94761 1208 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 TRUB2O95900 331 aaKnown RBP16.03■□□□□ 0.16
MBD1-217ENST00000588937 FAM107AO95990 144 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 IL1R2P27930 398 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 MIPP30301 263 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 MMP13P45452 471 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 PLCB3Q01970 1234 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 MORF4L2Q15014 288 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 SMTNL2Q2TAL5 461 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 TNFAIP8L3Q5GJ75 292 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 SRLQ86TD4 932 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 UHMK1Q8TAS1 419 aaKnown RBP16.03■□□□□ 0.16
MBD1-217ENST00000588937 SLC35B2Q8TB61 432 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 EPS8L3Q8TE67 593 aaKnown RBP16.03■□□□□ 0.16
MBD1-217ENST00000588937 DNAJB3Q8WWF6 145 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 USP6NLQ92738 828 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 ACSF2Q96CM8 615 aaPredicted RBP16.03■□□□□ 0.16
MBD1-217ENST00000588937 ZNF560Q96MR9 790 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 DDX23Q9BUQ8 820 aaKnown RBP16.03■□□□□ 0.16
MBD1-217ENST00000588937 RSAD1Q9HA92 442 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 CDHR5Q9HBB8 845 aa16.03■□□□□ 0.16
MBD1-217ENST00000588937 C2CD4BA6NLJ0 364 aa16.02■□□□□ 0.15
MBD1-217ENST00000588937 E5RJQ4 531 aa16.02■□□□□ 0.15
MBD1-217ENST00000588937 SGK1O00141 431 aa16.02■□□□□ 0.15
MBD1-217ENST00000588937 TRAPPC3O43617 180 aa16.02■□□□□ 0.15
MBD1-217ENST00000588937 CST8O60676 142 aa16.02■□□□□ 0.15
MBD1-217ENST00000588937 MYL3P08590 195 aa16.02■□□□□ 0.15
MBD1-217ENST00000588937 PNPLA4P41247 253 aa16.02■□□□□ 0.15
MBD1-217ENST00000588937 CRYBB1P53674 252 aaPredicted RBP16.02■□□□□ 0.15
MBD1-217ENST00000588937 GPS1Q13098 491 aa16.02■□□□□ 0.15
MBD1-217ENST00000588937 NOGQ13253 232 aa16.02■□□□□ 0.15
MBD1-217ENST00000588937 AUHQ13825 339 aaKnown RBP16.02■□□□□ 0.15
MBD1-217ENST00000588937 SNX17Q15036 470 aa16.02■□□□□ 0.15
MBD1-217ENST00000588937 C9orf57Q5W0N0 161 aa16.02■□□□□ 0.15
MBD1-217ENST00000588937 ARHGAP17Q68EM7 881 aa16.02■□□□□ 0.15
MBD1-217ENST00000588937 FAM183BPQ6ZVS7 135 aa16.02■□□□□ 0.15
MBD1-217ENST00000588937 MICALCLQ6ZW33 695 aa16.02■□□□□ 0.15
MBD1-217ENST00000588937 ZDHHC17Q8IUH5 632 aa16.02■□□□□ 0.15
MBD1-217ENST00000588937 SOCS4Q8WXH5 440 aa16.02■□□□□ 0.15
MBD1-217ENST00000588937 TTC25Q96NG3 672 aa16.02■□□□□ 0.15
MBD1-217ENST00000588937 CCT8L2Q96SF2 557 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms