RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 FBXO22Q8NEZ5 403 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 AUTS2Q8WXX7 1259 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 PIK3R5Q8WYR1 880 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 PGLYRP2Q96PD5 576 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 HERC2P3Q9BVR0 1158 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 ALG13Q9NP73 1137 aaKnown RBP15.33■□□□□ 0.04
NPC1-207ENST00000588867 ABI2Q9NYB9 513 aaPredicted RBP15.33■□□□□ 0.04
NPC1-207ENST00000588867 CHORDC1Q9UHD1 332 aaPredicted RBP15.33■□□□□ 0.04
NPC1-207ENST00000588867 PAXBP1Q9Y5B6 917 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 TBC1D4O60343 1298 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 BEST1O76090 585 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 ARHGEF15O94989 841 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 CSPG5O95196 566 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 NPR3P17342 541 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 NOP2P46087 812 aaKnown RBP15.33■□□□□ 0.04
NPC1-207ENST00000588867 MAP3K7CLP57077 242 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 DSG1Q02413 1049 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 PDCLQ13371 301 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 CYP4A22Q5TCH4 519 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 PMF1Q6P1K2 205 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 MON1BQ7L1V2 547 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 SPRED2Q7Z698 418 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 MSANTD4Q8NCY6 345 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 SLC35F5Q8WV83 523 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 ARHGEF26Q96DR7 871 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 SMARCD1Q96GM5 515 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 CPXM1Q96SM3 734 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 OXCT2Q9BYC2 517 aaPredicted RBP15.33■□□□□ 0.04
NPC1-207ENST00000588867 TJP2Q9UDY2 1190 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 CNOT8Q9UFF9 292 aaKnown RBP15.33■□□□□ 0.04
NPC1-207ENST00000588867 RWDD3Q9Y3V2 267 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 PCDHA11Q9Y5I1 949 aa15.33■□□□□ 0.04
NPC1-207ENST00000588867 GBF1Q92538 1859 aa15.32■□□□□ 0.04
NPC1-207ENST00000588867 NLRC5Q86WI3 1866 aa15.32■□□□□ 0.04
NPC1-207ENST00000588867 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.32■□□□□ 0.04
NPC1-207ENST00000588867 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.32■□□□□ 0.04
NPC1-207ENST00000588867 BUB1O43683 1085 aa15.32■□□□□ 0.04
NPC1-207ENST00000588867 CALB1P05937 261 aa15.32■□□□□ 0.04
NPC1-207ENST00000588867 SETSIPP0DME0 302 aa15.32■□□□□ 0.04
NPC1-207ENST00000588867 RRM1P23921 792 aa15.32■□□□□ 0.04
NPC1-207ENST00000588867 OR1D2P34982 312 aa15.32■□□□□ 0.04
NPC1-207ENST00000588867 PBX2P40425 430 aa15.32■□□□□ 0.04
NPC1-207ENST00000588867 C1QBPQ07021 282 aaKnown RBP15.32■□□□□ 0.04
NPC1-207ENST00000588867 NFE2Q16621 373 aaPredicted RBP15.32■□□□□ 0.04
NPC1-207ENST00000588867 PTPN20Q4JDL3 420 aa15.32■□□□□ 0.04
NPC1-207ENST00000588867 LIN9Q5TKA1 542 aa15.32■□□□□ 0.04
NPC1-207ENST00000588867 LLGL2Q6P1M3 1020 aa15.32■□□□□ 0.04
NPC1-207ENST00000588867 ZNF662Q6ZS27 426 aa15.32■□□□□ 0.04
NPC1-207ENST00000588867 CLEC20AQ6ZU45 233 aa15.32■□□□□ 0.04
NPC1-207ENST00000588867 C18orf8Q96DM3 657 aa15.32■□□□□ 0.04
NPC1-207ENST00000588867 TRIM11Q96F44 468 aa15.32■□□□□ 0.04
NPC1-207ENST00000588867 VCPIP1Q96JH7 1222 aa15.32■□□□□ 0.04
NPC1-207ENST00000588867 KCNK16Q96T55 309 aa15.32■□□□□ 0.04
NPC1-207ENST00000588867 IRX2Q9BZI1 471 aaPredicted RBP15.32■□□□□ 0.04
NPC1-207ENST00000588867 MRPL17Q9NRX2 175 aaKnown RBP15.32■□□□□ 0.04
NPC1-207ENST00000588867 MTRRQ9UBK8 725 aa15.32■□□□□ 0.04
NPC1-207ENST00000588867 ATP8B3O60423 1300 aa15.32■□□□□ 0.04
NPC1-207ENST00000588867 ADAM12O43184 909 aa15.31■□□□□ 0.04
NPC1-207ENST00000588867 CYP2F1P24903 491 aa15.31■□□□□ 0.04
NPC1-207ENST00000588867 CACNA2D1P54289 1103 aa15.31■□□□□ 0.04
NPC1-207ENST00000588867 PTP4A2Q12974 167 aa15.31■□□□□ 0.04
NPC1-207ENST00000588867 SLC35G2Q8TBE7 412 aa15.31■□□□□ 0.04
NPC1-207ENST00000588867 IPO4Q8TEX9 1081 aaKnown RBP15.31■□□□□ 0.04
NPC1-207ENST00000588867 C16orf45Q96MC5 204 aaPredicted RBP15.31■□□□□ 0.04
NPC1-207ENST00000588867 PLVAPQ9BX97 442 aa15.31■□□□□ 0.04
NPC1-207ENST00000588867 CTTNBP2NLQ9P2B4 639 aa15.31■□□□□ 0.04
NPC1-207ENST00000588867 STK39Q9UEW8 545 aa15.31■□□□□ 0.04
NPC1-207ENST00000588867 SALL4Q9UJQ4 1053 aa15.31■□□□□ 0.04
NPC1-207ENST00000588867 YBX2Q9Y2T7 364 aaKnown RBP15.31■□□□□ 0.04
NPC1-207ENST00000588867 PCDHB5Q9Y5E4 795 aa15.31■□□□□ 0.04
NPC1-207ENST00000588867 BACE2Q9Y5Z0 518 aa15.31■□□□□ 0.04
NPC1-207ENST00000588867 XPO1O14980 1071 aaKnown RBP15.31■□□□□ 0.04
NPC1-207ENST00000588867 ERBB2P04626 1255 aa15.31■□□□□ 0.04
NPC1-207ENST00000588867 MYBL1P10243 752 aa15.31■□□□□ 0.04
NPC1-207ENST00000588867 GRIK1P39086 918 aa15.31■□□□□ 0.04
NPC1-207ENST00000588867 GPR17Q13304 367 aa15.31■□□□□ 0.04
NPC1-207ENST00000588867 PTPN14Q15678 1187 aa15.31■□□□□ 0.04
NPC1-207ENST00000588867 RNF19BQ6ZMZ0 732 aa15.31■□□□□ 0.04
NPC1-207ENST00000588867 TMC7Q7Z402 723 aa15.31■□□□□ 0.04
NPC1-207ENST00000588867 PIGZQ86VD9 579 aa15.31■□□□□ 0.04
NPC1-207ENST00000588867 ATAD1Q8NBU5 361 aa15.31■□□□□ 0.04
NPC1-207ENST00000588867 SMOQ99835 787 aa15.31■□□□□ 0.04
NPC1-207ENST00000588867 CLSTN3Q9BQT9 956 aa15.31■□□□□ 0.04
NPC1-207ENST00000588867 PLXNA4Q9HCM2 1894 aa15.3■□□□□ 0.04
NPC1-207ENST00000588867 E5RJQ4 531 aa15.3■□□□□ 0.04
NPC1-207ENST00000588867 MOCS3O95396 460 aa15.3■□□□□ 0.04
NPC1-207ENST00000588867 CXCL14O95715 111 aa15.3■□□□□ 0.04
NPC1-207ENST00000588867 LCP1P13796 627 aa15.3■□□□□ 0.04
NPC1-207ENST00000588867 PLA2G4AP47712 749 aa15.3■□□□□ 0.04
NPC1-207ENST00000588867 SLC8B1Q6J4K2 584 aa15.3■□□□□ 0.04
NPC1-207ENST00000588867 SCN4BQ8IWT1 228 aa15.3■□□□□ 0.04
NPC1-207ENST00000588867 STK32AQ8WU08 396 aa15.3■□□□□ 0.04
NPC1-207ENST00000588867 RFFLQ8WZ73 363 aa15.3■□□□□ 0.04
NPC1-207ENST00000588867 NUP85Q9BW27 656 aa15.3■□□□□ 0.04
NPC1-207ENST00000588867 SLC4A5Q9BY07 1137 aa15.3■□□□□ 0.04
NPC1-207ENST00000588867 PBX4Q9BYU1 374 aa15.3■□□□□ 0.04
NPC1-207ENST00000588867 ZBP1Q9H171 429 aa15.3■□□□□ 0.04
NPC1-207ENST00000588867 OSGEPQ9NPF4 335 aa15.3■□□□□ 0.04
NPC1-207ENST00000588867 TMEM30AQ9NV96 361 aa15.3■□□□□ 0.04
NPC1-207ENST00000588867 MSRAQ9UJ68 235 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms