RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 PIGHQ14442 188 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-206ENST00000588860 HLTFQ14527 1009 aaKnown RBP eCLIP9.24□□□□□ -0.93
SMAD4-206ENST00000588860 ZNF268Q14587 947 aaPredicted RBP9.24□□□□□ -0.93
SMAD4-206ENST00000588860 SMC1AQ14683 1233 aaKnown RBP9.24□□□□□ -0.93
SMAD4-206ENST00000588860 LLGL1Q15334 1064 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 TRADDQ15628 312 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 SOWAHAQ2M3V2 549 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 ZFYVE27Q5T4F4 411 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 UNC93AQ86WB7 457 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 DDX42Q86XP3 938 aaKnown RBP eCLIP9.24□□□□□ -0.93
SMAD4-206ENST00000588860 PRELID2Q8N945 189 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 C12orf29Q8N999 325 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 APPL2Q8NEU8 664 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 JOSD2Q8TAC2 188 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 MAIP1Q8WWC4 291 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 LPPQ93052 612 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 CAVIN3Q969G5 261 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 ZBTB9Q96C00 473 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 KCTD12Q96CX2 325 aaKnown RBP9.24□□□□□ -0.93
SMAD4-206ENST00000588860 RUNDC3BQ96NL0 473 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 PPP1R10Q96QC0 940 aaKnown RBP9.24□□□□□ -0.93
SMAD4-206ENST00000588860 RAB17Q9H0T7 212 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 DPH5Q9H2P9 285 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 DPEP3Q9H4B8 488 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 VIPAS39Q9H9C1 493 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 AGO3Q9H9G7 860 aaKnown RBP9.24□□□□□ -0.93
SMAD4-206ENST00000588860 PRDM6Q9NQX0 595 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 ST7Q9NRC1 585 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 FAM114A2Q9NRY5 505 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 TRMT13Q9NUP7 481 aaKnown RBP9.24□□□□□ -0.93
SMAD4-206ENST00000588860 HESX1Q9UBX0 185 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 RASAL2Q9UJF2 1139 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 HPCAL4Q9UM19 191 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 UTP11Q9Y3A2 253 aaKnown RBP9.24□□□□□ -0.93
SMAD4-206ENST00000588860 NME7Q9Y5B8 376 aa9.24□□□□□ -0.93
SMAD4-206ENST00000588860 RANBP2P49792 3224 aaKnown RBP9.24□□□□□ -0.93
SMAD4-206ENST00000588860 NLRC5Q86WI3 1866 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 TANC1Q9C0D5 1861 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 SCN5AQ14524 2016 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 MEIS3P2A8K0S8 358 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 BHMG1C9JSJ3 638 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-206ENST00000588860 F8VP50 259 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 PI4K2BG5E9Z4 385 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 PIK3R2O00459 728 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 DAPK3O43293 454 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 HUS1O60921 280 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 GNRH1P01148 92 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 PFKMP08237 780 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 PDGFRBP09619 1106 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 SETSIPP0DME0 302 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 FGFR1P11362 822 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 TCF4P15884 667 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 OAS2P29728 719 aaKnown RBP9.23□□□□□ -0.93
SMAD4-206ENST00000588860 LRPAP1P30533 357 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 RFC1P35251 1148 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-206ENST00000588860 GNL1P36915 607 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-206ENST00000588860 COILP38432 576 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-206ENST00000588860 CETN2P41208 172 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 PTGIRP43119 386 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 GABRB2P47870 512 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 LPIN1Q14693 890 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 SIX1Q15475 284 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-206ENST00000588860 CYP1B1Q16678 543 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 KCTD19Q17RG1 926 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-206ENST00000588860 TRIM71Q2Q1W2 868 aaKnown RBP9.23□□□□□ -0.93
SMAD4-206ENST00000588860 ODF2Q5BJF6 829 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 PPP1R26Q5T8A7 1209 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-206ENST00000588860 FAM102AQ5T9C2 384 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-206ENST00000588860 ARHGAP17Q68EM7 881 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 OR6B2Q6IFH4 312 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 TTC27Q6P3X3 843 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 CCDC137Q6PK04 289 aaKnown RBP9.23□□□□□ -0.93
SMAD4-206ENST00000588860 FAM183BPQ6ZVS7 135 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 JAMLQ86YT9 394 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 ADGRF2Q8IZF7 708 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 ZDHHC14Q8IZN3 488 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 TOP6BLQ8N6T0 577 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 NIPA2Q8N8Q9 360 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 C12orf50Q8NA57 414 aaPredicted RBP9.23□□□□□ -0.93
SMAD4-206ENST00000588860 RNF169Q8NCN4 708 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 EXD1Q8NHP7 514 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 PXYLP1Q8TE99 480 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 KBTBD7Q8WVZ9 684 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 C1orf54Q8WWF1 131 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 ARMC5Q96C12 935 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 RBM41Q96IZ5 413 aaKnown RBP9.23□□□□□ -0.93
SMAD4-206ENST00000588860 GAD1Q99259 594 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 LPIN3Q9BQK8 851 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 OSBPL7Q9BZF2 842 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 TRIM31Q9BZY9 425 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 MIS12Q9H081 205 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 SLC38A7Q9NVC3 462 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 GDAP2Q9NXN4 497 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 DDX56Q9NY93 547 aaKnown RBP9.23□□□□□ -0.93
SMAD4-206ENST00000588860 CACNG4Q9UBN1 327 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 PCYOX1Q9UHG3 505 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 PADI3Q9ULW8 664 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 BRCA2P51587 3418 aa9.23□□□□□ -0.93
SMAD4-206ENST00000588860 ARL5CA6NH57 179 aa9.22□□□□□ -0.93
SMAD4-206ENST00000588860 MOXD2PA6NHM9 499 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms