RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 CAPN15O75808 1086 aa27.47■■□□□ 1.99
SCAMP4-210ENST00000588555 TCP1P17987 556 aaKnown RBP27.47■■□□□ 1.99
SCAMP4-210ENST00000588555 BCAR1P56945 870 aa27.47■■□□□ 1.99
SCAMP4-210ENST00000588555 RPS6KA1Q15418 735 aa27.47■■□□□ 1.99
SCAMP4-210ENST00000588555 CPNE8Q86YQ8 564 aa27.47■■□□□ 1.99
SCAMP4-210ENST00000588555 COG1Q8WTW3 980 aa27.47■■□□□ 1.99
SCAMP4-210ENST00000588555 PSMB7Q99436 277 aa27.47■■□□□ 1.99
SCAMP4-210ENST00000588555 TMEM110-MUSTN1A8MSY1 372 aa27.46■■□□□ 1.99
SCAMP4-210ENST00000588555 MYO1FO00160 1098 aa27.46■■□□□ 1.99
SCAMP4-210ENST00000588555 COMTP21964 271 aa27.46■■□□□ 1.99
SCAMP4-210ENST00000588555 PLA2G4AP47712 749 aa27.46■■□□□ 1.99
SCAMP4-210ENST00000588555 THEM5Q8N1Q8 247 aa27.46■■□□□ 1.99
SCAMP4-210ENST00000588555 BCL7CQ8WUZ0 217 aaPredicted RBP27.46■■□□□ 1.99
SCAMP4-210ENST00000588555 BADQ92934 168 aa27.46■■□□□ 1.99
SCAMP4-210ENST00000588555 TMEM209Q96SK2 561 aa27.46■■□□□ 1.99
SCAMP4-210ENST00000588555 PRKAG2Q9UGJ0 569 aa27.46■■□□□ 1.99
SCAMP4-210ENST00000588555 SIGLEC16A6NMB1 481 aa27.45■■□□□ 1.99
SCAMP4-210ENST00000588555 NT5C1B-RDH14C9J2C7 533 aa27.45■■□□□ 1.99
SCAMP4-210ENST00000588555 ZNF185O15231 689 aa27.45■■□□□ 1.99
SCAMP4-210ENST00000588555 NPR3P17342 541 aa27.45■■□□□ 1.99
SCAMP4-210ENST00000588555 CXCR5P32302 372 aa27.45■■□□□ 1.99
SCAMP4-210ENST00000588555 TAP1Q03518 808 aa27.45■■□□□ 1.99
SCAMP4-210ENST00000588555 WHAMMP3Q1A5X7 153 aa27.45■■□□□ 1.99
SCAMP4-210ENST00000588555 OTOP2Q7RTS6 562 aa27.45■■□□□ 1.99
SCAMP4-210ENST00000588555 FAM35AQ86V20 835 aa27.45■■□□□ 1.99
SCAMP4-210ENST00000588555 CD101Q93033 1021 aa27.45■■□□□ 1.99
SCAMP4-210ENST00000588555 MCEEQ96PE7 176 aa27.45■■□□□ 1.99
SCAMP4-210ENST00000588555 MIS12Q9H081 205 aa27.45■■□□□ 1.99
SCAMP4-210ENST00000588555 CYLDQ9NQC7 956 aa27.45■■□□□ 1.99
SCAMP4-210ENST00000588555 SF3B1O75533 1304 aaKnown RBP eCLIP27.45■■□□□ 1.98
SCAMP4-210ENST00000588555 GOLGA8SH3BPF8 625 aa27.45■■□□□ 1.98
SCAMP4-210ENST00000588555 XPO1O14980 1071 aaKnown RBP27.45■■□□□ 1.98
SCAMP4-210ENST00000588555 PPIGQ13427 754 aaKnown RBP eCLIP27.45■■□□□ 1.98
SCAMP4-210ENST00000588555 FUT10Q6P4F1 479 aa27.45■■□□□ 1.98
SCAMP4-210ENST00000588555 CLEC20AQ6ZU45 233 aa27.45■■□□□ 1.98
SCAMP4-210ENST00000588555 LRRTM3Q86VH5 581 aa27.45■■□□□ 1.98
SCAMP4-210ENST00000588555 MYRIPQ8NFW9 859 aa27.45■■□□□ 1.98
SCAMP4-210ENST00000588555 TMLHEQ9NVH6 421 aa27.45■■□□□ 1.98
SCAMP4-210ENST00000588555 NLRC5Q86WI3 1866 aa27.44■■□□□ 1.98
SCAMP4-210ENST00000588555 PIK3R2O00459 728 aa27.44■■□□□ 1.98
SCAMP4-210ENST00000588555 DDX3YO15523 660 aaKnown RBP27.44■■□□□ 1.98
SCAMP4-210ENST00000588555 BEST1O76090 585 aa27.44■■□□□ 1.98
SCAMP4-210ENST00000588555 PROSCO94903 275 aa27.44■■□□□ 1.98
SCAMP4-210ENST00000588555 SLU7O95391 586 aaKnown RBP27.44■■□□□ 1.98
SCAMP4-210ENST00000588555 EFEMP2O95967 443 aa27.44■■□□□ 1.98
SCAMP4-210ENST00000588555 FGFR3P22607 806 aa27.44■■□□□ 1.98
SCAMP4-210ENST00000588555 DNA2P51530 1060 aa27.44■■□□□ 1.98
SCAMP4-210ENST00000588555 CDR1P51861 262 aa27.44■■□□□ 1.98
SCAMP4-210ENST00000588555 ZNF252P-AS1Q0IIN9 211 aa27.44■■□□□ 1.98
SCAMP4-210ENST00000588555 MRPL58Q14197 206 aaKnown RBP27.44■■□□□ 1.98
SCAMP4-210ENST00000588555 FAM171A1Q5VUB5 890 aa27.44■■□□□ 1.98
SCAMP4-210ENST00000588555 FAM183BPQ6ZVS7 135 aa27.44■■□□□ 1.98
SCAMP4-210ENST00000588555 CREG2Q8IUH2 290 aa27.44■■□□□ 1.98
SCAMP4-210ENST00000588555 LRRN4CLQ8ND94 238 aa27.44■■□□□ 1.98
SCAMP4-210ENST00000588555 MYLPFQ96A32 169 aa27.44■■□□□ 1.98
SCAMP4-210ENST00000588555 HSFY1Q96LI6 401 aa27.44■■□□□ 1.98
SCAMP4-210ENST00000588555 MED10Q9BTT4 135 aa27.44■■□□□ 1.98
SCAMP4-210ENST00000588555 SELENOOQ9BVL4 669 aa27.44■■□□□ 1.98
SCAMP4-210ENST00000588555 CARD6Q9BX69 1037 aa27.44■■□□□ 1.98
SCAMP4-210ENST00000588555 KRT82Q9NSB4 513 aa27.44■■□□□ 1.98
SCAMP4-210ENST00000588555 FAM200BP0CF97 657 aa27.43■■□□□ 1.98
SCAMP4-210ENST00000588555 KRT3P12035 628 aa27.43■■□□□ 1.98
SCAMP4-210ENST00000588555 FPGSQ05932 587 aa27.43■■□□□ 1.98
SCAMP4-210ENST00000588555 VARS2Q5ST30 1063 aaKnown RBP27.43■■□□□ 1.98
SCAMP4-210ENST00000588555 FAM117BQ6P1L5 589 aa27.43■■□□□ 1.98
SCAMP4-210ENST00000588555 DCUN1D2Q6PH85 259 aa27.43■■□□□ 1.98
SCAMP4-210ENST00000588555 C7orf61Q8IZ16 206 aa27.43■■□□□ 1.98
SCAMP4-210ENST00000588555 UBE2Q2Q8WVN8 375 aa27.43■■□□□ 1.98
SCAMP4-210ENST00000588555 PIWIL1Q96J94 861 aaKnown RBP27.43■■□□□ 1.98
SCAMP4-210ENST00000588555 TMEM30AQ9NV96 361 aa27.43■■□□□ 1.98
SCAMP4-210ENST00000588555 PAPSS1O43252 624 aaPredicted RBP27.43■■□□□ 1.98
SCAMP4-210ENST00000588555 RFC1P35251 1148 aaPredicted RBP27.43■■□□□ 1.98
SCAMP4-210ENST00000588555 TSPY1Q01534 308 aa27.43■■□□□ 1.98
SCAMP4-210ENST00000588555 OGDHQ02218 1023 aa27.43■■□□□ 1.98
SCAMP4-210ENST00000588555 OLFML1Q6UWY5 402 aa27.43■■□□□ 1.98
SCAMP4-210ENST00000588555 ZNF365Q70YC5 407 aa27.43■■□□□ 1.98
SCAMP4-210ENST00000588555 PIGZQ86VD9 579 aa27.43■■□□□ 1.98
SCAMP4-210ENST00000588555 JOSD2Q8TAC2 188 aa27.43■■□□□ 1.98
SCAMP4-210ENST00000588555 METTL5Q9NRN9 209 aaKnown RBP27.43■■□□□ 1.98
SCAMP4-210ENST00000588555 PTPRDP23468 1912 aa27.42■■□□□ 1.98
SCAMP4-210ENST00000588555 MIF4GDA9UHW6 222 aaKnown RBP27.42■■□□□ 1.98
SCAMP4-210ENST00000588555 ALDH7A1P49419 539 aaKnown RBP27.42■■□□□ 1.98
SCAMP4-210ENST00000588555 CACNA2D1P54289 1103 aa27.42■■□□□ 1.98
SCAMP4-210ENST00000588555 EPHB4P54760 987 aa27.42■■□□□ 1.98
SCAMP4-210ENST00000588555 SLC8A3P57103 927 aa27.42■■□□□ 1.98
SCAMP4-210ENST00000588555 ELAVL2Q12926 359 aaKnown RBP27.42■■□□□ 1.98
SCAMP4-210ENST00000588555 OR6B2Q6IFH4 312 aa27.42■■□□□ 1.98
SCAMP4-210ENST00000588555 SMOQ99835 787 aa27.42■■□□□ 1.98
SCAMP4-210ENST00000588555 IP6K2Q9UHH9 426 aa27.42■■□□□ 1.98
SCAMP4-210ENST00000588555 LAMA2P24043 3122 aaKnown RBP27.41■■□□□ 1.98
SCAMP4-210ENST00000588555 CES2O00748 559 aa27.41■■□□□ 1.98
SCAMP4-210ENST00000588555 KCNK3O14649 394 aa27.41■■□□□ 1.98
SCAMP4-210ENST00000588555 AP1G2O75843 785 aa27.41■■□□□ 1.98
SCAMP4-210ENST00000588555 MAN1A1P33908 653 aa27.41■■□□□ 1.98
SCAMP4-210ENST00000588555 SLC1A1P43005 524 aa27.41■■□□□ 1.98
SCAMP4-210ENST00000588555 SNX16P57768 344 aa27.41■■□□□ 1.98
SCAMP4-210ENST00000588555 MAPRE1Q15691 268 aaKnown RBP27.41■■□□□ 1.98
SCAMP4-210ENST00000588555 FAM102AQ5T9C2 384 aaPredicted RBP27.41■■□□□ 1.98
SCAMP4-210ENST00000588555 CMTR2Q8IYT2 770 aaKnown RBP27.41■■□□□ 1.98
SCAMP4-210ENST00000588555 ZMIZ2Q8NF64 920 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms