RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 CEP295NLQ96MC4 621 aa20.85■□□□□ 0.93
TPM4-208ENST00000588410 TIGD1Q96MW7 591 aa20.85■□□□□ 0.93
TPM4-208ENST00000588410 TSG101Q99816 390 aa20.85■□□□□ 0.93
TPM4-208ENST00000588410 GTPBP4Q9BZE4 634 aaKnown RBP20.85■□□□□ 0.93
TPM4-208ENST00000588410 IMPG2Q9BZV3 1241 aa20.85■□□□□ 0.93
TPM4-208ENST00000588410 SMG9Q9H0W8 520 aaKnown RBP20.85■□□□□ 0.93
TPM4-208ENST00000588410 DPEP3Q9H4B8 488 aa20.85■□□□□ 0.93
TPM4-208ENST00000588410 EHD2Q9NZN4 543 aa20.85■□□□□ 0.93
TPM4-208ENST00000588410 ATP8B3O60423 1300 aa20.84■□□□□ 0.93
TPM4-208ENST00000588410 GLULP15104 373 aa20.84■□□□□ 0.93
TPM4-208ENST00000588410 TARSP26639 723 aaKnown RBP20.84■□□□□ 0.93
TPM4-208ENST00000588410 RAP1GAPP47736 663 aa20.84■□□□□ 0.93
TPM4-208ENST00000588410 CDH8P55286 799 aa20.84■□□□□ 0.93
TPM4-208ENST00000588410 PLCB2Q00722 1185 aa20.84■□□□□ 0.93
TPM4-208ENST00000588410 ZNF658Q5TYW1 1059 aaPredicted RBP20.84■□□□□ 0.93
TPM4-208ENST00000588410 C1orf210Q8IVY1 113 aa20.84■□□□□ 0.93
TPM4-208ENST00000588410 FAM3CQ92520 227 aa20.84■□□□□ 0.93
TPM4-208ENST00000588410 ELOVL4Q9GZR5 314 aa20.84■□□□□ 0.93
TPM4-208ENST00000588410 TRPC7Q9HCX4 862 aa20.84■□□□□ 0.93
TPM4-208ENST00000588410 SPATA6Q9NWH7 488 aaPredicted RBP20.84■□□□□ 0.93
TPM4-208ENST00000588410 NDRG2Q9UN36 371 aaKnown RBP20.84■□□□□ 0.93
TPM4-208ENST00000588410 NME7Q9Y5B8 376 aa20.84■□□□□ 0.93
TPM4-208ENST00000588410 CETN3O15182 167 aa20.83■□□□□ 0.93
TPM4-208ENST00000588410 HLA-DRAP01903 254 aa20.83■□□□□ 0.93
TPM4-208ENST00000588410 TRIM49P0CI25 452 aa20.83■□□□□ 0.93
TPM4-208ENST00000588410 TRIM49CP0CI26 452 aa20.83■□□□□ 0.93
TPM4-208ENST00000588410 GCLMP48507 274 aa20.83■□□□□ 0.93
TPM4-208ENST00000588410 ENPEPQ07075 957 aa20.83■□□□□ 0.93
TPM4-208ENST00000588410 ZCWPW2Q504Y3 356 aa20.83■□□□□ 0.93
TPM4-208ENST00000588410 DENND5BQ6ZUT9 1274 aa20.83■□□□□ 0.93
TPM4-208ENST00000588410 CCDC150Q8NCX0 1101 aa20.83■□□□□ 0.93
TPM4-208ENST00000588410 ELMO3Q96BJ8 720 aa20.83■□□□□ 0.93
TPM4-208ENST00000588410 MSANTD3Q96H12 275 aa20.83■□□□□ 0.93
TPM4-208ENST00000588410 C8orf48Q96LL4 319 aa20.83■□□□□ 0.93
TPM4-208ENST00000588410 LRRC3BQ96PB8 259 aa20.83■□□□□ 0.93
TPM4-208ENST00000588410 MED10Q9BTT4 135 aa20.83■□□□□ 0.93
TPM4-208ENST00000588410 C8orf33Q9H7E9 229 aaPredicted RBP20.83■□□□□ 0.93
TPM4-208ENST00000588410 MMRN2Q9H8L6 949 aa20.83■□□□□ 0.93
TPM4-208ENST00000588410 KIF9Q9HAQ2 790 aa20.83■□□□□ 0.93
TPM4-208ENST00000588410 TDP1Q9NUW8 608 aa20.83■□□□□ 0.93
TPM4-208ENST00000588410 CIZ1Q9ULV3 898 aaPredicted RBP20.83■□□□□ 0.93
TPM4-208ENST00000588410 PCDHA5Q9Y5H7 936 aa20.83■□□□□ 0.93
TPM4-208ENST00000588410 TRAV19A0A0A6YYK7 116 aa20.82■□□□□ 0.92
TPM4-208ENST00000588410 F8VP50 259 aa20.82■□□□□ 0.92
TPM4-208ENST00000588410 ARNTLO00327 626 aa20.82■□□□□ 0.92
TPM4-208ENST00000588410 KINO60870 393 aaKnown RBP20.82■□□□□ 0.92
TPM4-208ENST00000588410 EPB41P11171 864 aaKnown RBP20.82■□□□□ 0.92
TPM4-208ENST00000588410 TRIM21P19474 475 aaKnown RBP20.82■□□□□ 0.92
TPM4-208ENST00000588410 NBL1P41271 181 aa20.82■□□□□ 0.92
TPM4-208ENST00000588410 PRCPP42785 496 aa20.82■□□□□ 0.92
TPM4-208ENST00000588410 MLLT6P55198 1093 aaPredicted RBP20.82■□□□□ 0.92
TPM4-208ENST00000588410 C1orf220Q5T0J3 134 aa20.82■□□□□ 0.92
TPM4-208ENST00000588410 CC2D1AQ6P1N0 951 aaPredicted RBP20.82■□□□□ 0.92
TPM4-208ENST00000588410 C1orf228Q6PIY5 440 aa20.82■□□□□ 0.92
TPM4-208ENST00000588410 USP13Q92995 863 aaPredicted RBP20.82■□□□□ 0.92
TPM4-208ENST00000588410 ZFYVE19Q96K21 471 aa20.82■□□□□ 0.92
TPM4-208ENST00000588410 B3GNT5Q9BYG0 378 aa20.82■□□□□ 0.92
TPM4-208ENST00000588410 ZNF518BQ9C0D4 1074 aa20.82■□□□□ 0.92
TPM4-208ENST00000588410 LAMTOR5O43504 91 aa20.81■□□□□ 0.92
TPM4-208ENST00000588410 STX10O60499 249 aa20.81■□□□□ 0.92
TPM4-208ENST00000588410 ASS1P00966 412 aaKnown RBP20.81■□□□□ 0.92
TPM4-208ENST00000588410 USP17L7P0C7H9 530 aa20.81■□□□□ 0.92
TPM4-208ENST00000588410 CCNE1P24864 410 aa20.81■□□□□ 0.92
TPM4-208ENST00000588410 STIM1Q13586 685 aa20.81■□□□□ 0.92
TPM4-208ENST00000588410 SPOPLQ6IQ16 392 aa20.81■□□□□ 0.92
TPM4-208ENST00000588410 FRMD5Q7Z6J6 570 aa20.81■□□□□ 0.92
TPM4-208ENST00000588410 TTC8Q8TAM2 541 aa20.81■□□□□ 0.92
TPM4-208ENST00000588410 ERCC4Q92889 916 aaPredicted RBP20.81■□□□□ 0.92
TPM4-208ENST00000588410 CLDN23Q96B33 292 aa20.81■□□□□ 0.92
TPM4-208ENST00000588410 SDCBP2Q9H190 292 aa20.81■□□□□ 0.92
TPM4-208ENST00000588410 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.81■□□□□ 0.922e-6■■■■■ 36.9
TPM4-208ENST00000588410 TRPM5Q9NZQ8 1165 aa20.81■□□□□ 0.92
TPM4-208ENST00000588410 CLDN5O00501 218 aa20.8■□□□□ 0.92
TPM4-208ENST00000588410 TADA3O75528 432 aa20.8■□□□□ 0.92
TPM4-208ENST00000588410 CKMP06732 381 aa20.8■□□□□ 0.92
TPM4-208ENST00000588410 GTF2H1P32780 548 aa20.8■□□□□ 0.92
TPM4-208ENST00000588410 RPS9P46781 194 aaKnown RBP20.8■□□□□ 0.92
TPM4-208ENST00000588410 PDE6CP51160 858 aa20.8■□□□□ 0.92
TPM4-208ENST00000588410 PPP3CAQ08209 521 aa20.8■□□□□ 0.92
TPM4-208ENST00000588410 ZNF268Q14587 947 aaPredicted RBP20.8■□□□□ 0.92
TPM4-208ENST00000588410 COBLL1Q53SF7 1204 aa20.8■□□□□ 0.92
TPM4-208ENST00000588410 TTC16Q8NEE8 873 aa20.8■□□□□ 0.92
TPM4-208ENST00000588410 TAS1R2Q8TE23 839 aa20.8■□□□□ 0.92
TPM4-208ENST00000588410 EEF2KMTQ96G04 330 aa20.8■□□□□ 0.92
TPM4-208ENST00000588410 TMEM8AQ9HCN3 771 aa20.8■□□□□ 0.92
TPM4-208ENST00000588410 GKN1Q9NS71 199 aa20.8■□□□□ 0.92
TPM4-208ENST00000588410 GTSE1Q9NYZ3 720 aa20.8■□□□□ 0.92
TPM4-208ENST00000588410 CCL26Q9Y258 94 aa20.8■□□□□ 0.92
TPM4-208ENST00000588410 TCHHQ07283 1943 aa20.8■□□□□ 0.92
TPM4-208ENST00000588410 SHISA7A6NL88 538 aa20.79■□□□□ 0.92
TPM4-208ENST00000588410 PROB1E7EW31 1015 aa20.79■□□□□ 0.92
TPM4-208ENST00000588410 GFRA3O60609 400 aa20.79■□□□□ 0.92
TPM4-208ENST00000588410 ASPAP45381 313 aa20.79■□□□□ 0.92
TPM4-208ENST00000588410 SOX9P48436 509 aa20.79■□□□□ 0.92
TPM4-208ENST00000588410 PPP3CCP48454 512 aa20.79■□□□□ 0.92
TPM4-208ENST00000588410 NDST1P52848 882 aa20.79■□□□□ 0.92
TPM4-208ENST00000588410 NOP14P78316 857 aaKnown RBP20.79■□□□□ 0.92
TPM4-208ENST00000588410 ITPRIPL2Q3MIP1 535 aa20.79■□□□□ 0.92
TPM4-208ENST00000588410 KRT39Q6A163 491 aa20.79■□□□□ 0.92
TPM4-208ENST00000588410 ACOT1Q86TX2 421 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms