RNA–Protein interactions for RNA: ENST00000588055.1

SDHDP1-201, Transcript of succinate dehydrogenase complex subunit D pseudogene 1, humanhuman

BASIC

Gene SDHDP1, Length 474 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDP1-201ENST00000588055 C5orf42Q9H799 3197 aa12.61□□□□□ -0.39
SDHDP1-201ENST00000588055 F8VP50 259 aa12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 TPM3P06753 285 aa12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 PAEPP09466 180 aa12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 SLC9A1P19634 815 aa12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 USP8P40818 1118 aa12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 UBXN1Q04323 297 aa12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 ZP2Q05996 745 aa12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 RAPGEF1Q13905 1077 aa12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 DDR2Q16832 855 aa12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 ARHGAP15Q53QZ3 475 aa12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 DENND5BQ6ZUT9 1274 aa12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 LUZP1Q86V48 1076 aa12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 PLCD3Q8N3E9 789 aa12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 RBBP8NLQ8NC74 664 aaPredicted RBP12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 GIPC2Q8TF65 315 aa12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 CYFIP2Q96F07 1278 aa12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 SPATA17Q96L03 361 aa12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 TWNKQ96RR1 684 aa12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 B3GNT5Q9BYG0 378 aa12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 AVENQ9NQS1 362 aaPredicted RBP12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 CEP72Q9P209 647 aa12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 DNMT3BQ9UBC3 853 aaKnown RBP12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 KIAA1257Q9ULG3 409 aa12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 NME7Q9Y5B8 376 aa12.6□□□□□ -0.39
SDHDP1-201ENST00000588055 CLDN5O00501 218 aa12.59□□□□□ -0.39
SDHDP1-201ENST00000588055 MED7O43513 233 aa12.59□□□□□ -0.39
SDHDP1-201ENST00000588055 VDRP11473 427 aa12.59□□□□□ -0.39
SDHDP1-201ENST00000588055 ATP1A3P13637 1013 aa12.59□□□□□ -0.39
SDHDP1-201ENST00000588055 GPR15P49685 360 aa12.59□□□□□ -0.39
SDHDP1-201ENST00000588055 RAD23BP54727 409 aa12.59□□□□□ -0.39
SDHDP1-201ENST00000588055 NTHL1P78549 312 aa12.59□□□□□ -0.39
SDHDP1-201ENST00000588055 IQCB1Q15051 598 aa12.59□□□□□ -0.39
SDHDP1-201ENST00000588055 STILQ15468 1287 aa12.59□□□□□ -0.39
SDHDP1-201ENST00000588055 ARHGAP44Q17R89 818 aa12.59□□□□□ -0.39
SDHDP1-201ENST00000588055 SMYD5Q6GMV2 418 aa12.59□□□□□ -0.39
SDHDP1-201ENST00000588055 PHLDB3Q6NSJ2 640 aa12.59□□□□□ -0.39
SDHDP1-201ENST00000588055 DNAJB7Q7Z6W7 309 aaPredicted RBP12.59□□□□□ -0.39
SDHDP1-201ENST00000588055 FUKQ8N0W3 1084 aa12.59□□□□□ -0.39
SDHDP1-201ENST00000588055 C12orf29Q8N999 325 aa12.59□□□□□ -0.39
SDHDP1-201ENST00000588055 SLC4A11Q8NBS3 891 aa12.59□□□□□ -0.39
SDHDP1-201ENST00000588055 GPR152Q8TDT2 470 aa12.59□□□□□ -0.39
SDHDP1-201ENST00000588055 WHAMMQ8TF30 809 aa12.59□□□□□ -0.39
SDHDP1-201ENST00000588055 C8orf48Q96LL4 319 aa12.59□□□□□ -0.39
SDHDP1-201ENST00000588055 HNRNPABQ99729 332 aaKnown RBP12.59□□□□□ -0.39
SDHDP1-201ENST00000588055 ZMYM5Q9UJ78 669 aa12.59□□□□□ -0.39
SDHDP1-201ENST00000588055 MYH10P35580 1976 aa12.59□□□□□ -0.39
SDHDP1-201ENST00000588055 TCF20Q9UGU0 1960 aaKnown RBP12.59□□□□□ -0.39
SDHDP1-201ENST00000588055 SLC38A8A6NNN8 435 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 C2CD4DB7Z1M9 353 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 NOL4O94818 638 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 MICAL2O94851 1124 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 RTN3O95197 1032 aaPredicted RBP12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 NPR3P17342 541 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 GABRR2P28476 465 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 BCAT1P54687 386 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 EPHA5P54756 1037 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 MAP3K7CLP57077 242 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 IFRD2Q12894 506 aaPredicted RBP12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 GOLGA7BQ2TAP0 167 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 SDHAF4Q5VUM1 108 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 UBR7Q8N806 425 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 NEK11Q8NG66 645 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 ING5Q8WYH8 240 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 MRPS31Q92665 395 aaKnown RBP12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 KAT5Q92993 513 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 TRMT2BQ96GJ1 504 aaKnown RBP12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 KREMEN1Q96MU8 473 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 SLITRK1Q96PX8 696 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 ANP32EQ9BTT0 268 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 GPR88Q9GZN0 384 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 ATXN3LQ9H3M9 355 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 PNPLA8Q9NP80 782 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 PLCB1Q9NQ66 1216 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 FAM207AQ9NSI2 230 aaPredicted RBP12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 GDE1Q9NZC3 331 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 DNAJC12Q9UKB3 198 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 CDH7Q9ULB5 785 aa12.58□□□□□ -0.4
SDHDP1-201ENST00000588055 A0A1W2PRU2 124 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 LRRC10BA6NIK2 292 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 UCHL3P15374 230 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 CEBPBP17676 345 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 ACO1P21399 889 aaKnown RBP12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 DDX6P26196 483 aaKnown RBP eCLIP12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 GNA15P30679 374 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 PDE6CP51160 858 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 SLC5A3P53794 718 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 ZNF445P59923 1031 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 SYCP1Q15431 976 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 SLC5A9Q2M3M2 681 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 PPP1R26Q5T8A7 1209 aaPredicted RBP12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 KLHDC7AQ5VTJ3 777 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 ARHGAP17Q68EM7 881 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 GJB7Q6PEY0 223 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 MTSS1LQ765P7 747 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 TMC8Q8IU68 726 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 NPAS3Q8IXF0 933 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 ZDHHC14Q8IZN3 488 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 HS6ST3Q8IZP7 471 aa12.57□□□□□ -0.4
SDHDP1-201ENST00000588055 GJD3Q8N144 294 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms