RNA–Protein interactions for RNA: ENST00000587928.5

ILF3-208, Transcript of interleukin enhancer binding factor 3, human

TSL 2

Gene ILF3, Length 4,230 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ILF3-208	ENST00000587928	EMID1	Q96A84	441 aa	Predicted RBP	11.46	□□□□□ -0.58
ILF3-208	ENST00000587928	DCPS	Q96C86	337 aa	Known RBP	11.46	□□□□□ -0.58
ILF3-208	ENST00000587928	RUNDC3B	Q96NL0	473 aa		11.46	□□□□□ -0.58
ILF3-208	ENST00000587928	SH2D3A	Q9BRG2	576 aa		11.46	□□□□□ -0.58
ILF3-208	ENST00000587928	IMPG2	Q9BZV3	1241 aa		11.46	□□□□□ -0.58
ILF3-208	ENST00000587928	PCDHB2	Q9Y5E7	798 aa		11.46	□□□□□ -0.58
ILF3-208	ENST00000587928	GJB6	O95452	261 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	MAGEA6	P43360	314 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	CSRP3	P50461	194 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	SEC24C	P53992	1094 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	PMS2	P54278	862 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	POU5F1B	Q06416	359 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	ACCSL	Q4AC99	568 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	IRGC	Q6NXR0	463 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	CYP4X1	Q8N118	509 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	RSPH1	Q8WYR4	309 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	FMO2	Q99518	471 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	STOML1	Q9UBI4	398 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	GJD2	Q9UKL4	321 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	CCT8L1P	A6NM43	557 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	PFKM	P08237	780 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	TMED10	P49755	219 aa	Known RBP	11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	IFI35	P80217	286 aa	Predicted RBP	11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	PUS10	Q3MIT2	529 aa	Known RBP	11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	SAMD7	Q7Z3H4	446 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	BRSK2	Q8IWQ3	736 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	SULF1	Q8IWU6	871 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	NKD2	Q969F2	451 aa	Predicted RBP	11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	ELMO3	Q96BJ8	720 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	CCDC127	Q96BQ5	260 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	RTP4	Q96DX8	246 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	NDUFA13	Q9P0J0	144 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	CHORDC1	Q9UHD1	332 aa	Predicted RBP	11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	BARX2	Q9UMQ3	279 aa	Predicted RBP	11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	ACTL7B	Q9Y614	415 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	ABCB4	P21439	1286 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	MFAP3	P55082	362 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	EMC2	Q15006	297 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	SGSM1	Q2NKQ1	1148 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	ANKRD20A2	Q5SQ80	823 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	ANKRD20A1	Q5TYW2	823 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	ANKRD20A3	Q5VUR7	823 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	PDCD7	Q8N8D1	485 aa	Known RBP	11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	MCPH1	Q8NEM0	835 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	SMC6	Q96SB8	1091 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	SIKE1	Q9BRV8	207 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	ROPN1B	Q9BZX4	212 aa	Predicted RBP	11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	ROPN1	Q9HAT0	212 aa	Predicted RBP	11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	SLC9A2	Q9UBY0	812 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	SEPT9	Q9UHD8	586 aa	Predicted RBP	11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	EFR3B	Q9Y2G0	817 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	SCN10A	Q9Y5Y9	1956 aa		11.45	□□□□□ -0.58
ILF3-208	ENST00000587928	ADCY3	O60266	1144 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	CST3	P01034	146 aa	Predicted RBP	11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	RRM1	P23921	792 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	DMPK	Q09013	629 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	CUL2	Q13617	745 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	CCDC137	Q6PK04	289 aa	Known RBP	11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	ACO2	Q99798	780 aa	Known RBP	11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	GABBR1	Q9UBS5	961 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	CHMP2B	Q9UQN3	213 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	KRT5	P13647	590 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	MAGEA3	P43357	314 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	LIG4	P49917	911 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	CCDC153	Q494R4	210 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	XKR3	Q5GH77	459 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	TXNRD3NB	Q6F5E7	133 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	PPM1K	Q8N3J5	372 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	UBL4B	Q8N7F7	174 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	DEPTOR	Q8TB45	409 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	DPF3	Q92784	378 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	SLITRK1	Q96PX8	696 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	SDCBP2	Q9H190	292 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	AZI2	Q9H6S1	392 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	KIAA1586	Q9HCI6	787 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	COMMD3-BMI1	R4GMX3	469 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	TRIP12	Q14669	1992 aa	Predicted RBP	11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	MAGEA13P	A6NCF6	341 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	HNRNPDL	O14979	420 aa	Known RBP	11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	WEE2	P0C1S8	567 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	IDO1	P14902	403 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	CYP3A5	P20815	502 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	POLG	P54098	1239 aa	Predicted RBP	11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	HMGCS2	P54868	508 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	CCNG2	Q16589	344 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	TRMT10C	Q7L0Y3	403 aa	Known RBP	11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	FNIP1	Q8TF40	1166 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	CCDC28B	Q9BUN5	200 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	FAM124B	Q9H5Z6	455 aa	Predicted RBP	11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	ACAD9	Q9H845	621 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	IFT122	Q9HBG6	1241 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	GPRC5D	Q9NZD1	345 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	SCHIP1	Q9P0W5	487 aa	Predicted RBP	11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	RASAL2	Q9UJF2	1139 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	CROT	Q9UKG9	612 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	TMEM98	Q9Y2Y6	226 aa		11.44	□□□□□ -0.58
ILF3-208	ENST00000587928	CCDC160	A6NGH7	325 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	TMEM110-MUSTN1	A8MSY1	372 aa		11.43	□□□□□ -0.58
ILF3-208	ENST00000587928	LIAS	O43766	372 aa		11.43	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms