RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 NEK2P51955 445 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 TFAMQ00059 246 aaKnown RBP10.14□□□□□ -0.79
LINC01539-201ENST00000587904 ZNF699Q32M78 642 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 KCTD16Q68DU8 428 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 SPOPLQ6IQ16 392 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 TBC1D1Q86TI0 1168 aaPredicted RBP10.14□□□□□ -0.79
LINC01539-201ENST00000587904 UBL4BQ8N7F7 174 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 ZNF564Q8TBZ8 553 aaPredicted RBP10.14□□□□□ -0.79
LINC01539-201ENST00000587904 MS4A14Q96JA4 679 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 KATNAL1Q9BW62 490 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 MIS12Q9H081 205 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 RBM12Q9NTZ6 932 aaKnown RBP10.14□□□□□ -0.79
LINC01539-201ENST00000587904 STIM2Q9P246 746 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 SLC12A6Q9UHW9 1150 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 TMEM59LQ9UK28 342 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 COMMD3-BMI1R4GMX3 469 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 SMIM35A0A1B0GVV1 85 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 MBLAC1A4D2B0 266 aaPredicted RBP10.14□□□□□ -0.79
LINC01539-201ENST00000587904 DYNC1LI2O43237 492 aaPredicted RBP10.14□□□□□ -0.79
LINC01539-201ENST00000587904 ADCY6O43306 1168 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 TSPAN1O60635 241 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 ZMYND10O75800 440 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 LSM8O95777 96 aaKnown RBP10.14□□□□□ -0.79
LINC01539-201ENST00000587904 IGHA2P01877 340 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 IQCF3P0C7M6 154 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 STAG3L1P0CL83 205 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 CXCL8P10145 99 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 HSPA6P17066 643 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 ARF4P18085 180 aaPredicted RBP10.14□□□□□ -0.79
LINC01539-201ENST00000587904 DRD4P21917 467 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 GSTT1P30711 240 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 ATICP31939 592 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 CD97P48960 835 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 DNA2P51530 1060 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 LSAMPQ13449 338 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 PPP2R5EQ16537 467 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 TMEM270Q6UE05 265 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 RUFY4Q6ZNE9 571 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 KIAA0319LQ8IZA0 1049 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 FBF1Q8TES7 1133 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 HHIPL1Q96JK4 782 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 FAM84AQ96KN4 292 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 HAPLN3Q96S86 360 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 NUP85Q9BW27 656 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 AP5M1Q9H0R1 490 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 GOLPH3Q9H4A6 298 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 ACP6Q9NPH0 428 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 PDP2Q9P2J9 529 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 NOC2LQ9Y3T9 749 aaKnown RBP10.14□□□□□ -0.79
LINC01539-201ENST00000587904 TLL2Q9Y6L7 1015 aa10.14□□□□□ -0.79
LINC01539-201ENST00000587904 TMEM247A6NEH6 219 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 GPR25O00155 361 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 TNPO2O14787 897 aaKnown RBP10.13□□□□□ -0.79
LINC01539-201ENST00000587904 DDX3YO15523 660 aaKnown RBP10.13□□□□□ -0.79
LINC01539-201ENST00000587904 ATP9BO43861 1147 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 ATP2C2O75185 946 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 SMIM10L2AP0DMW4 78 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 SMIM10L2BP0DMW5 78 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 HOXD12P35452 270 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 MLH1P40692 756 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 MYL6P60660 151 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 USP46P62068 366 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 MFSD10Q14728 455 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 RALGAPA2Q2PPJ7 1873 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 RNF220Q5VTB9 566 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 MCOLN2Q8IZK6 566 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 CENPTQ96BT3 561 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 LRRC1Q9BTT6 524 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 GCOM2Q9BZD3 368 aaPredicted RBP10.13□□□□□ -0.79
LINC01539-201ENST00000587904 WNT8AQ9H1J5 351 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 VRTNQ9H8Y1 702 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 TMBIM4Q9HC24 238 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 EHD2Q9NZN4 543 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 FLRT1Q9NZU1 646 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 CNOT8Q9UFF9 292 aaKnown RBP10.13□□□□□ -0.79
LINC01539-201ENST00000587904 ALG6Q9Y672 507 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 KAT6AQ92794 2004 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 UMODL1Q5DID0 1318 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 HAS3O00219 553 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 STAU1O95793 577 aaKnown RBP10.13□□□□□ -0.79
LINC01539-201ENST00000587904 CST3P01034 146 aaPredicted RBP10.13□□□□□ -0.79
LINC01539-201ENST00000587904 GRM5P41594 1212 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 NOMO3P69849 1222 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 C1QBPQ07021 282 aaKnown RBP10.13□□□□□ -0.79
LINC01539-201ENST00000587904 LIN9Q5TKA1 542 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 THOC7Q6I9Y2 204 aaKnown RBP10.13□□□□□ -0.79
LINC01539-201ENST00000587904 CPLX4Q7Z7G2 160 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 PHF13Q86YI8 300 aaPredicted RBP10.13□□□□□ -0.79
LINC01539-201ENST00000587904 TTC39CQ8N584 583 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 EIF1ADQ8N9N8 165 aaKnown RBP10.13□□□□□ -0.79
LINC01539-201ENST00000587904 ZNF668Q96K58 619 aaPredicted RBP10.13□□□□□ -0.79
LINC01539-201ENST00000587904 ZSWIM1Q9BR11 485 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 XYLT2Q9H1B5 865 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 SLITRK6Q9H5Y7 841 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 SMARCAL1Q9NZC9 954 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 DLGAP2Q9P1A6 1054 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 DERAQ9Y315 318 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 SCINQ9Y6U3 715 aa10.13□□□□□ -0.79
LINC01539-201ENST00000587904 MROH7Q68CQ1 1323 aa10.12□□□□□ -0.79
LINC01539-201ENST00000587904 THAP12O43422 761 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms