RNA–Protein interactions for RNA: ENST00000587697.1

TNFRSF11A-203, Transcript of TNF receptor superfamily member 11a, humanhuman

TSL 3

Gene TNFRSF11A, Length 528 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-203ENST00000587697 NCK2O43639 380 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 URI1O94763 535 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 FGBP02675 491 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 PRLRP16471 622 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 NPR3P17342 541 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 PBX3P40426 434 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 HTRA4P83105 476 aaPredicted RBP12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 TAP1Q03518 808 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 VARS2Q5ST30 1063 aaKnown RBP12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 TMEM240Q5SV17 173 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 FAM171A1Q5VUB5 890 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 DNAJC24Q6P3W2 148 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 CLEC20AQ6ZU45 233 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 OTOP2Q7RTS6 562 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 PHLDB2Q86SQ0 1253 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 DAAM2Q86T65 1068 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 TMEM110Q86TL2 294 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 FEZF2Q8TBJ5 459 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 UBE2Q2Q8WVN8 375 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 MYLPFQ96A32 169 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 TMEM209Q96SK2 561 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 HTATIP2Q9BUP3 242 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 VN1R3Q9BXE9 311 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 TRIM7Q9C029 511 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 MIS12Q9H081 205 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 ZCWPW1Q9H0M4 648 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 KRT82Q9NSB4 513 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 CDC23Q9UJX2 597 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 ANAPC7Q9UJX3 599 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 SNX12Q9UMY4 172 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 MRFAP1Q9Y605 127 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 OBSL1O75147 1896 aa12.59□□□□□ -0.39
TNFRSF11A-203ENST00000587697 CARNS1A5YM72 827 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 SIGLEC16A6NMB1 481 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 NT5C1B-RDH14C9J2C7 533 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 CLDN5O00501 218 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 TBC1D4O60343 1298 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 GJB6O95452 261 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 FAM200BP0CF97 657 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 LAG3P18627 525 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 MAN1A1P33908 653 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 SCNN1AP37088 669 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 RGS7P49802 495 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 TSPY1Q01534 308 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 TUBB2AQ13885 445 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 MAPRE1Q15691 268 aaKnown RBP12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 FAM117BQ6P1L5 589 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 FAM183BPQ6ZVS7 135 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 PEX26Q7Z412 305 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 LRRTM3Q86VH5 581 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 SLC39A11Q8N1S5 342 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 ZMIZ2Q8NF64 920 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 KCTD13Q8WZ19 329 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 HERVK_113Q902F9 699 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 CD101Q93033 1021 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 SMARCD1Q96GM5 515 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 HES6Q96HZ4 224 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 IGSF21Q96ID5 467 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 BTBD6Q96KE9 485 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 HSFY1Q96LI6 401 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 MED10Q9BTT4 135 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 TUBB2BQ9BVA1 445 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 SYNCQ9H7C4 482 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 CSNK1G1Q9HCP0 422 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 TMLHEQ9NVH6 421 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 LCMT1Q9UIC8 334 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 AMFRQ9UKV5 643 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 HYOU1Q9Y4L1 999 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 ALG6Q9Y672 507 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 SAR1BQ9Y6B6 198 aa12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 MRPL42Q9Y6G3 142 aaKnown RBP12.58□□□□□ -0.4
TNFRSF11A-203ENST00000587697 MTCL1Q9Y4B5 1905 aaKnown RBP12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 OR6C75A6NL08 312 aa12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 RIOK3O14730 519 aaKnown RBP12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 PAPSS1O43252 624 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 BEST1O76090 585 aa12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 PROSCO94903 275 aa12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 GJB5O95377 273 aa12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 ACADSBP45954 432 aa12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 ALDH7A1P49419 539 aaKnown RBP12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 SNX16P57768 344 aa12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 RPL7AP62424 266 aaKnown RBP12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 ZNF252P-AS1Q0IIN9 211 aa12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 BTG3Q14201 252 aaPredicted RBP12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 MESDQ14696 234 aa12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 RTP2Q5QGT7 225 aa12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 ZNF280DQ6N043 979 aa12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 KCNT2Q6UVM3 1135 aa12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 OLFML1Q6UWY5 402 aa12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 PIGZQ86VD9 579 aa12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 CPNE8Q86YQ8 564 aa12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 ZDHHC17Q8IUH5 632 aa12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 NIPA2Q8N8Q9 360 aa12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 COLGALT1Q8NBJ5 622 aa12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 FNIP1Q8TF40 1166 aa12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 ZNF558Q96NG5 402 aa12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 MCEEQ96PE7 176 aa12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 OSBPL9Q96SU4 736 aa12.57□□□□□ -0.4
TNFRSF11A-203ENST00000587697 SLC9A7Q96T83 725 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms