RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 CPA6Q8N4T0 437 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 LRRC52Q8N7C0 313 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 ARL14EPQ8N8R7 260 aaPredicted RBP6.88□□□□□ -1.31
SDF2-205ENST00000587629 C12orf50Q8NA57 414 aaPredicted RBP6.88□□□□□ -1.31
SDF2-205ENST00000587629 GLIS3Q8NEA6 775 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 OR5B17Q8NGF7 314 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 RPLP0P6Q8NHW5 317 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 CXorf38Q8TB03 319 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 GAB3Q8WWW8 586 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 HPDLQ96IR7 371 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 CHAMP1Q96JM3 812 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 PKMYT1Q99640 499 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 ACBD6Q9BR61 282 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 LINC00597Q9H2U6 94 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 ECT2Q9H8V3 914 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 SEL1LQ9UBV2 794 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 SIX4Q9UIU6 781 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 ITGA11Q9UKX5 1188 aa6.88□□□□□ -1.31
SDF2-205ENST00000587629 R3HCC1Q9Y3T6 440 aaKnown RBP6.88□□□□□ -1.31
SDF2-205ENST00000587629 TRAV19A0A0A6YYK7 116 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 ANTXRLA6NF34 631 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 NOL4O94818 638 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 LDHAP00338 332 aaKnown RBP6.87□□□□□ -1.31
SDF2-205ENST00000587629 ABL1P00519 1130 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 TNNC2P02585 160 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 USP17L7P0C7H9 530 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 HDCP19113 662 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 PDCP20941 246 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 SYT1P21579 422 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 DRD1P21728 446 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 GARTP22102 1010 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 BDNFP23560 247 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 GRIK1P39086 918 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 IFNAR2P48551 515 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 LHX1P48742 406 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 USP46P62068 366 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 AMPD2Q01433 879 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 POU5F1Q01860 360 aaKnown RBP6.87□□□□□ -1.31
SDF2-205ENST00000587629 CYP27A1Q02318 531 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 MYO1EQ12965 1108 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 KCNB1Q14721 858 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 PDGFRLQ15198 375 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 ZNF77Q15935 545 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 C2orf27AQ580R0 203 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 TCEAL6Q6IPX3 200 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 CCDC73Q6ZRK6 1079 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 TTC30AQ86WT1 665 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 CBWD2Q8IUF1 395 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 TMEM86AQ8N2M4 240 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 GPD1LQ8N335 351 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 FSIP1Q8NA03 581 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 RDH13Q8NBN7 331 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 SH3RF2Q8TEC5 729 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 OSCP1Q8WVF1 389 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 EZH1Q92800 747 aaPredicted RBP6.87□□□□□ -1.31
SDF2-205ENST00000587629 CD101Q93033 1021 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 TCEAL3Q969E4 200 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 ANKRD36BP1Q96IX9 119 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 USP28Q96RU2 1077 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 MMS19Q96T76 1030 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 SYT15Q9BQS2 421 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 KIF9Q9HAQ2 790 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 ABCB6Q9NP58 842 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 GDAP2Q9NXN4 497 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 MAGEC2Q9UBF1 373 aaPredicted RBP6.87□□□□□ -1.31
SDF2-205ENST00000587629 UXTQ9UBK9 157 aaPredicted RBP6.87□□□□□ -1.31
SDF2-205ENST00000587629 ZMYM5Q9UJ78 669 aa6.87□□□□□ -1.31
SDF2-205ENST00000587629 NUP210Q8TEM1 1887 aaPredicted RBP6.87□□□□□ -1.31
SDF2-205ENST00000587629 TCHHQ07283 1943 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 ZNF233A6NK53 670 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 GABRDO14764 452 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 EPN2O95208 641 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 ZNF806P0C7X5 589 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 DLATP10515 647 aaKnown RBP6.86□□□□□ -1.31
SDF2-205ENST00000587629 PCSK1P29120 753 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 GBP1P32455 592 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 HOXD13P35453 343 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 RAP1GAPP47736 663 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 CYP2J2P51589 502 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 DGKEP52429 567 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 ZXDBP98169 803 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 CREB5Q02930 508 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 FAM160A1Q05DH4 1040 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 IFRD2Q12894 506 aaPredicted RBP6.86□□□□□ -1.31
SDF2-205ENST00000587629 NR1H3Q13133 447 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 CUL4AQ13619 759 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 DMC1Q14565 340 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 ZNF268Q14587 947 aaPredicted RBP6.86□□□□□ -1.31
SDF2-205ENST00000587629 SLC39A14Q15043 492 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 ST3GAL2Q16842 350 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 DUOXA2Q1HG44 320 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 EML3Q32P44 896 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 PLK5Q496M5 336 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 CFAP221Q4G0U5 840 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 MDH1BQ5I0G3 518 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 N4BP2L1Q5TBK1 243 aaPredicted RBP6.86□□□□□ -1.31
SDF2-205ENST00000587629 STPG1Q5TH74 334 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 FOXD4L5Q5VV16 416 aaPredicted RBP6.86□□□□□ -1.31
SDF2-205ENST00000587629 FAM171BQ6P995 826 aa6.86□□□□□ -1.31
SDF2-205ENST00000587629 C4orf50Q6ZRC1 276 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms