RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 PIGHQ14442 188 aaPredicted RBP17.23■□□□□ 0.35
RANBP3-209ENST00000587411 TMEM270Q6UE05 265 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 RIPOR1Q6ZS17 1223 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 PODNQ7Z5L7 613 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.23■□□□□ 0.35
RANBP3-209ENST00000587411 EZH1Q92800 747 aaPredicted RBP17.23■□□□□ 0.35
RANBP3-209ENST00000587411 C7orf26Q96N11 449 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 EPAS1Q99814 870 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 SPATA16Q9BXB7 569 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 ARMCX1Q9P291 453 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 TAGLN3Q9UI15 199 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 SMCHD1A6NHR9 2005 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 SPECC1L-ADORA2AF8WAN1 911 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 EXTL3O43909 919 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 FKBP6O75344 327 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 INHBAP08476 426 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 TBXAS1P24557 533 aaPredicted RBP17.23■□□□□ 0.35
RANBP3-209ENST00000587411 CDK7P50613 346 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 GAD2Q05329 585 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 ZNF252P-AS1Q0IIN9 211 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 CNPY1Q3B7I2 92 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 BBS9Q3SYG4 887 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 TMCO4Q5TGY1 634 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 SH2D5Q6ZV89 423 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 RBM15BQ8NDT2 890 aaKnown RBP17.23■□□□□ 0.35
RANBP3-209ENST00000587411 SLC44A1Q8WWI5 657 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 WWP1Q9H0M0 922 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 GINM1Q9NU53 330 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 PLA2G4CQ9UP65 541 aa17.23■□□□□ 0.35
RANBP3-209ENST00000587411 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.23■□□□□ 0.35
RANBP3-209ENST00000587411 FAM237BA0A1B0GVD1 139 aa17.22■□□□□ 0.35
RANBP3-209ENST00000587411 SPAG6O75602 509 aa17.22■□□□□ 0.35
RANBP3-209ENST00000587411 C4BPAP04003 597 aaKnown RBP17.22■□□□□ 0.35
RANBP3-209ENST00000587411 MTMR1Q13613 665 aa17.22■□□□□ 0.35
RANBP3-209ENST00000587411 PLA2G4FQ68DD2 849 aa17.22■□□□□ 0.35
RANBP3-209ENST00000587411 DNAJC24Q6P3W2 148 aa17.22■□□□□ 0.35
RANBP3-209ENST00000587411 POLNQ7Z5Q5 900 aa17.22■□□□□ 0.35
RANBP3-209ENST00000587411 ADGRG6Q86SQ4 1221 aa17.22■□□□□ 0.35
RANBP3-209ENST00000587411 SDCCAG8Q86SQ7 713 aaPredicted RBP17.22■□□□□ 0.35
RANBP3-209ENST00000587411 ALYREFQ86V81 257 aaKnown RBP17.22■□□□□ 0.35
RANBP3-209ENST00000587411 SERAC1Q96JX3 654 aa17.22■□□□□ 0.35
RANBP3-209ENST00000587411 IQCGQ9H095 443 aaKnown RBP17.22■□□□□ 0.35
RANBP3-209ENST00000587411 COL2A1P02458 1487 aaPredicted RBP17.22■□□□□ 0.35
RANBP3-209ENST00000587411 ENO1P06733 434 aaKnown RBP17.22■□□□□ 0.35
RANBP3-209ENST00000587411 TNNI1P19237 187 aa17.22■□□□□ 0.35
RANBP3-209ENST00000587411 ZNF200P98182 395 aaPredicted RBP17.22■□□□□ 0.35
RANBP3-209ENST00000587411 LIN52Q52LA3 116 aa17.22■□□□□ 0.35
RANBP3-209ENST00000587411 TDRD10Q5VZ19 366 aaKnown RBP17.22■□□□□ 0.35
RANBP3-209ENST00000587411 KYAT3Q6YP21 454 aaKnown RBP17.22■□□□□ 0.35
RANBP3-209ENST00000587411 ULK2Q8IYT8 1036 aa17.22■□□□□ 0.35
RANBP3-209ENST00000587411 ST13P4Q8IZP2 240 aaPredicted RBP17.22■□□□□ 0.35
RANBP3-209ENST00000587411 NIPA2Q8N8Q9 360 aa17.22■□□□□ 0.35
RANBP3-209ENST00000587411 B4GALNT2Q8NHY0 566 aa17.22■□□□□ 0.35
RANBP3-209ENST00000587411 ACER1Q8TDN7 264 aa17.22■□□□□ 0.35
RANBP3-209ENST00000587411 RSAD2Q8WXG1 361 aa17.22■□□□□ 0.35
RANBP3-209ENST00000587411 PANX3Q96QZ0 392 aa17.22■□□□□ 0.35
RANBP3-209ENST00000587411 TCEAL9Q9UHQ7 104 aa17.22■□□□□ 0.35
RANBP3-209ENST00000587411 PPME1Q9Y570 386 aa17.22■□□□□ 0.35
RANBP3-209ENST00000587411 COMMD3-BMI1R4GMX3 469 aa17.22■□□□□ 0.35
RANBP3-209ENST00000587411 C2orf71A6NGG8 1288 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 WDR64B1ANS9 1081 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 F8VP50 259 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 FAM155BO75949 473 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 SFNP31947 248 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 ABCD1P33897 745 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 RPL22P35268 128 aaKnown RBP17.21■□□□□ 0.35
RANBP3-209ENST00000587411 ATG16L1Q676U5 607 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 AAGABQ6PD74 315 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 DCUN1D2Q6PH85 259 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 IL31RAQ8NI17 732 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 BSNDQ8WZ55 320 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 MCEEQ96PE7 176 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 TUBGCP5Q96RT8 1024 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 XPO7Q9UIA9 1087 aaKnown RBP17.21■□□□□ 0.35
RANBP3-209ENST00000587411 HERC5Q9UII4 1024 aaKnown RBP17.21■□□□□ 0.35
RANBP3-209ENST00000587411 SERPINA10Q9UK55 444 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 RGPD3A6NKT7 1758 aaPredicted RBP17.21■□□□□ 0.35
RANBP3-209ENST00000587411 RGPD4Q7Z3J3 1758 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 LSM8O95777 96 aaKnown RBP17.21■□□□□ 0.35
RANBP3-209ENST00000587411 ZCCHC18P0CG32 403 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 PYGBP11216 843 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 CPA2P48052 419 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 OTUD4Q01804 1114 aaKnown RBP17.21■□□□□ 0.35
RANBP3-209ENST00000587411 CDC16Q13042 620 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 HNRNPDQ14103 355 aaKnown RBP17.21■□□□□ 0.35
RANBP3-209ENST00000587411 SPOPLQ6IQ16 392 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 ACAD11Q709F0 780 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 ACTL9Q8TC94 416 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 C1orf21Q9H246 121 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 PPARGC1AQ9UBK2 798 aaKnown RBP17.21■□□□□ 0.35
RANBP3-209ENST00000587411 AGTPBP1Q9UPW5 1226 aa17.21■□□□□ 0.35
RANBP3-209ENST00000587411 LY75O60449 1722 aa17.21■□□□□ 0.34
RANBP3-209ENST00000587411 TCRBV5S1A1TA0A578 114 aa17.2■□□□□ 0.34
RANBP3-209ENST00000587411 COPEO14579 308 aa17.2■□□□□ 0.34
RANBP3-209ENST00000587411 PIAS1O75925 651 aa17.2■□□□□ 0.34
RANBP3-209ENST00000587411 FAAP100Q0VG06 881 aa17.2■□□□□ 0.34
RANBP3-209ENST00000587411 STRIP1Q5VSL9 837 aa17.2■□□□□ 0.34
RANBP3-209ENST00000587411 TREML1Q86YW5 311 aa17.2■□□□□ 0.34
RANBP3-209ENST00000587411 MTBPQ96DY7 904 aa17.2■□□□□ 0.34
RANBP3-209ENST00000587411 CSRNP1Q96S65 589 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms