RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 MED10Q9BTT4 135 aa15.81■□□□□ 0.12
NFIX-208ENST00000587260 RHOBTB2Q9BYZ6 727 aa15.81■□□□□ 0.12
NFIX-208ENST00000587260 SEPT11Q9NVA2 429 aaKnown RBP15.81■□□□□ 0.12
NFIX-208ENST00000587260 TRMT1Q9NXH9 659 aaKnown RBP15.81■□□□□ 0.12
NFIX-208ENST00000587260 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.81■□□□□ 0.12
NFIX-208ENST00000587260 BACE2Q9Y5Z0 518 aa15.81■□□□□ 0.12
NFIX-208ENST00000587260 WDR27A2RRH5 827 aa15.8■□□□□ 0.12
NFIX-208ENST00000587260 RCCD1A6NED2 376 aa15.8■□□□□ 0.12
NFIX-208ENST00000587260 CLDN5O00501 218 aa15.8■□□□□ 0.12
NFIX-208ENST00000587260 CFHP08603 1231 aa15.8■□□□□ 0.12
NFIX-208ENST00000587260 H2AFZP0C0S5 128 aa15.8■□□□□ 0.12
NFIX-208ENST00000587260 ARHGAP25P42331 645 aa15.8■□□□□ 0.12
NFIX-208ENST00000587260 NOMO3P69849 1222 aa15.8■□□□□ 0.12
NFIX-208ENST00000587260 ROR1Q01973 937 aa15.8■□□□□ 0.12
NFIX-208ENST00000587260 CENPCQ03188 943 aa15.8■□□□□ 0.12
NFIX-208ENST00000587260 SLC8B1Q6J4K2 584 aa15.8■□□□□ 0.12
NFIX-208ENST00000587260 ACAD10Q6JQN1 1059 aa15.8■□□□□ 0.12
NFIX-208ENST00000587260 H2AFVQ71UI9 128 aa15.8■□□□□ 0.12
NFIX-208ENST00000587260 DCP1BQ8IZD4 617 aaKnown RBP15.8■□□□□ 0.12
NFIX-208ENST00000587260 MYCBPAPQ8TBZ2 947 aa15.8■□□□□ 0.12
NFIX-208ENST00000587260 CYFIP2Q96F07 1278 aa15.8■□□□□ 0.12
NFIX-208ENST00000587260 LACRTQ9GZZ8 138 aa15.8■□□□□ 0.12
NFIX-208ENST00000587260 ZNF576Q9H609 170 aa15.8■□□□□ 0.12
NFIX-208ENST00000587260 ABI2Q9NYB9 513 aaPredicted RBP15.8■□□□□ 0.12
NFIX-208ENST00000587260 TAS2R14Q9NYV8 317 aa15.8■□□□□ 0.12
NFIX-208ENST00000587260 TSPAN16Q9UKR8 245 aa15.8■□□□□ 0.12
NFIX-208ENST00000587260 SSX2IPQ9Y2D8 614 aa15.8■□□□□ 0.12
NFIX-208ENST00000587260 PATJQ8NI35 1801 aa15.79■□□□□ 0.12
NFIX-208ENST00000587260 ANKRD62A6NC57 917 aa15.79■□□□□ 0.12
NFIX-208ENST00000587260 C2orf71A6NGG8 1288 aa15.79■□□□□ 0.12
NFIX-208ENST00000587260 BTNL10A8MVZ5 291 aa15.79■□□□□ 0.12
NFIX-208ENST00000587260 M0QYV0 167 aa15.79■□□□□ 0.12
NFIX-208ENST00000587260 FSCN2O14926 492 aa15.79■□□□□ 0.12
NFIX-208ENST00000587260 TEX28O15482 410 aa15.79■□□□□ 0.12
NFIX-208ENST00000587260 LPXNO60711 386 aa15.79■□□□□ 0.12
NFIX-208ENST00000587260 FTLP02792 175 aaPredicted RBP15.79■□□□□ 0.12
NFIX-208ENST00000587260 CNPP09543 421 aaKnown RBP15.79■□□□□ 0.12
NFIX-208ENST00000587260 NDUFV1P49821 464 aa15.79■□□□□ 0.12
NFIX-208ENST00000587260 CREMQ03060 361 aa15.79■□□□□ 0.12
NFIX-208ENST00000587260 KIF5AQ12840 1032 aa15.79■□□□□ 0.12
NFIX-208ENST00000587260 FAM171BQ6P995 826 aa15.79■□□□□ 0.12
NFIX-208ENST00000587260 RNF19BQ6ZMZ0 732 aa15.79■□□□□ 0.12
NFIX-208ENST00000587260 KIAA1328Q86T90 577 aa15.79■□□□□ 0.12
NFIX-208ENST00000587260 FAM35AQ86V20 835 aa15.79■□□□□ 0.12
NFIX-208ENST00000587260 TMEM35BQ8NCS4 154 aa15.79■□□□□ 0.12
NFIX-208ENST00000587260 VCPIP1Q96JH7 1222 aa15.79■□□□□ 0.12
NFIX-208ENST00000587260 B3GNT5Q9BYG0 378 aa15.79■□□□□ 0.12
NFIX-208ENST00000587260 TSGA10Q9BZW7 698 aa15.79■□□□□ 0.12
NFIX-208ENST00000587260 PDCL3Q9H2J4 239 aa15.79■□□□□ 0.12
NFIX-208ENST00000587260 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.79■□□□□ 0.12
NFIX-208ENST00000587260 KRT82Q9NSB4 513 aa15.79■□□□□ 0.12
NFIX-208ENST00000587260 TRANK1O15050 2925 aa15.79■□□□□ 0.12
NFIX-208ENST00000587260 MTMR11A4FU01 709 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 KRT86O43790 486 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 LILRB3O75022 631 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 MICAL2O94851 1124 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 TMEM253P0C7T8 217 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 GALCP54803 685 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 MAPRE1Q15691 268 aaKnown RBP15.78■□□□□ 0.12
NFIX-208ENST00000587260 PKDCCQ504Y2 493 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 PHF13Q86YI8 300 aaPredicted RBP15.78■□□□□ 0.12
NFIX-208ENST00000587260 SPATA2LQ8IUW3 424 aaPredicted RBP15.78■□□□□ 0.12
NFIX-208ENST00000587260 FUKQ8N0W3 1084 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 WDTC1Q8N5D0 677 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 LRCH3Q96II8 777 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 HNRNPABQ99729 332 aaKnown RBP15.78■□□□□ 0.12
NFIX-208ENST00000587260 OXCT2Q9BYC2 517 aaPredicted RBP15.78■□□□□ 0.12
NFIX-208ENST00000587260 RXFP1Q9HBX9 757 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 CEP83Q9Y592 693 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 A0A0U1RQJ8 604 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 BDNFP23560 247 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 GPD2P43304 727 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 TCEAL1Q15170 157 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 ARHGAP29Q52LW3 1261 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 HABP4Q5JVS0 413 aaKnown RBP15.78■□□□□ 0.12
NFIX-208ENST00000587260 DENND1BQ6P3S1 775 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 C4orf50Q6ZRC1 276 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 PAQR9Q6ZVX9 377 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 TTC9BQ8N6N2 239 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 MRPL43Q8N983 215 aaKnown RBP15.78■□□□□ 0.12
NFIX-208ENST00000587260 UBA3Q8TBC4 463 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 ATRIPQ8WXE1 791 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 KLHL5Q96PQ7 755 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 EMILIN2Q9BXX0 1053 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 PACSIN1Q9BY11 444 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 TTYH1Q9H313 450 aaPredicted RBP15.78■□□□□ 0.12
NFIX-208ENST00000587260 PRDM12Q9H4Q4 367 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 NGRNQ9NPE2 291 aaKnown RBP15.78■□□□□ 0.12
NFIX-208ENST00000587260 FNIP2Q9P278 1114 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 HESX1Q9UBX0 185 aa15.78■□□□□ 0.12
NFIX-208ENST00000587260 A0A0A6YYK5 440 aaPredicted RBP15.77■□□□□ 0.11
NFIX-208ENST00000587260 TMCO5BA8MYB1 307 aa15.77■□□□□ 0.11
NFIX-208ENST00000587260 VNN2O95498 520 aa15.77■□□□□ 0.11
NFIX-208ENST00000587260 ABL1P00519 1130 aa15.77■□□□□ 0.11
NFIX-208ENST00000587260 ADH1AP07327 375 aa15.77■□□□□ 0.11
NFIX-208ENST00000587260 SETSIPP0DME0 302 aa15.77■□□□□ 0.11
NFIX-208ENST00000587260 NSFP46459 744 aaKnown RBP15.77■□□□□ 0.11
NFIX-208ENST00000587260 CACNA2D1P54289 1103 aa15.77■□□□□ 0.11
NFIX-208ENST00000587260 C1QBPQ07021 282 aaKnown RBP15.77■□□□□ 0.11
NFIX-208ENST00000587260 ADCY1Q08828 1119 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms