RNA–Protein interactions for RNA: ENST00000586558.5

DDX39A-204, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 1,127 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-204ENST00000586558 KRT82Q9NSB4 513 aa20.33■□□□□ 0.85
DDX39A-204ENST00000586558 IFNKQ9P0W0 207 aa20.33■□□□□ 0.85
DDX39A-204ENST00000586558 GRXCR2A6NFK2 248 aa20.32■□□□□ 0.84
DDX39A-204ENST00000586558 CLDN5O00501 218 aa20.32■□□□□ 0.84
DDX39A-204ENST00000586558 SOAT2O75908 522 aa20.32■□□□□ 0.84
DDX39A-204ENST00000586558 FAM200BP0CF97 657 aa20.32■□□□□ 0.84
DDX39A-204ENST00000586558 PTPN2P17706 415 aa20.32■□□□□ 0.84
DDX39A-204ENST00000586558 GRIK1P39086 918 aa20.32■□□□□ 0.84
DDX39A-204ENST00000586558 POLR2FP61218 127 aaKnown RBP20.32■□□□□ 0.84
DDX39A-204ENST00000586558 CBX2Q14781 532 aaPredicted RBP20.32■□□□□ 0.84
DDX39A-204ENST00000586558 DRAP1Q14919 205 aaPredicted RBP20.32■□□□□ 0.84
DDX39A-204ENST00000586558 PTCRAQ6ISU1 281 aaPredicted RBP20.32■□□□□ 0.84
DDX39A-204ENST00000586558 FAM71AQ8IYT1 594 aa20.32■□□□□ 0.84
DDX39A-204ENST00000586558 PSMG2Q969U7 264 aa20.32■□□□□ 0.84
DDX39A-204ENST00000586558 CSNK1G1Q9HCP0 422 aa20.32■□□□□ 0.84
DDX39A-204ENST00000586558 AVENQ9NQS1 362 aaPredicted RBP20.32■□□□□ 0.84
DDX39A-204ENST00000586558 AJAP1Q9UKB5 411 aaPredicted RBP20.32■□□□□ 0.84
DDX39A-204ENST00000586558 F8VP50 259 aa20.31■□□□□ 0.84
DDX39A-204ENST00000586558 F8VZ95 297 aa20.31■□□□□ 0.84
DDX39A-204ENST00000586558 RNF225M0QZC1 329 aaPredicted RBP20.31■□□□□ 0.84
DDX39A-204ENST00000586558 FOXN3O00409 490 aaPredicted RBP20.31■□□□□ 0.84
DDX39A-204ENST00000586558 EPHB6O15197 1021 aa20.31■□□□□ 0.84
DDX39A-204ENST00000586558 AP1G2O75843 785 aa20.31■□□□□ 0.84
DDX39A-204ENST00000586558 CSH1P0DML2 217 aa20.31■□□□□ 0.84
DDX39A-204ENST00000586558 CSH2P0DML3 217 aa20.31■□□□□ 0.84
DDX39A-204ENST00000586558 ADORA2BP29275 332 aa20.31■□□□□ 0.84
DDX39A-204ENST00000586558 USP8P40818 1118 aa20.31■□□□□ 0.84
DDX39A-204ENST00000586558 BPIFB4P59827 614 aa20.31■□□□□ 0.84
DDX39A-204ENST00000586558 SMAD2Q15796 467 aaKnown RBP20.31■□□□□ 0.84
DDX39A-204ENST00000586558 DDR2Q16832 855 aa20.31■□□□□ 0.84
DDX39A-204ENST00000586558 PPP1R26Q5T8A7 1209 aaPredicted RBP20.31■□□□□ 0.84
DDX39A-204ENST00000586558 IQCDQ96DY2 449 aa20.31■□□□□ 0.84
DDX39A-204ENST00000586558 RBSNQ9H1K0 784 aa20.31■□□□□ 0.84
DDX39A-204ENST00000586558 WDR6Q9NNW5 1121 aaKnown RBP20.31■□□□□ 0.84
DDX39A-204ENST00000586558 PNPLA8Q9NP80 782 aa20.31■□□□□ 0.84
DDX39A-204ENST00000586558 EHD2Q9NZN4 543 aa20.31■□□□□ 0.84
DDX39A-204ENST00000586558 HESX1Q9UBX0 185 aa20.31■□□□□ 0.84
DDX39A-204ENST00000586558 CLUHO75153 1309 aa20.3■□□□□ 0.84
DDX39A-204ENST00000586558 O00370 1275 aa20.3■□□□□ 0.84
DDX39A-204ENST00000586558 FGF19O95750 216 aa20.3■□□□□ 0.84
DDX39A-204ENST00000586558 NPR3P17342 541 aa20.3■□□□□ 0.84
DDX39A-204ENST00000586558 PBX1P40424 430 aa20.3■□□□□ 0.84
DDX39A-204ENST00000586558 EPHA5P54756 1037 aa20.3■□□□□ 0.84
DDX39A-204ENST00000586558 SLC8A3P57103 927 aa20.3■□□□□ 0.84
DDX39A-204ENST00000586558 PTK2Q05397 1052 aa20.3■□□□□ 0.84
DDX39A-204ENST00000586558 CNGA2Q16280 664 aa20.3■□□□□ 0.84
DDX39A-204ENST00000586558 TAF12Q16514 161 aa20.3■□□□□ 0.84
DDX39A-204ENST00000586558 MEA1Q16626 185 aa20.3■□□□□ 0.84
DDX39A-204ENST00000586558 PABPC1LQ4VXU2 614 aaKnown RBP20.3■□□□□ 0.84
DDX39A-204ENST00000586558 SARM1Q6SZW1 724 aa20.3■□□□□ 0.84
DDX39A-204ENST00000586558 LCLAT1Q6UWP7 414 aa20.3■□□□□ 0.84
DDX39A-204ENST00000586558 GRASPQ7Z6J2 395 aaPredicted RBP20.3■□□□□ 0.84
DDX39A-204ENST00000586558 DNAJB7Q7Z6W7 309 aaPredicted RBP20.3■□□□□ 0.84
DDX39A-204ENST00000586558 GAS2L3Q86XJ1 694 aa20.3■□□□□ 0.84
DDX39A-204ENST00000586558 ANKRD52Q8NB46 1076 aa20.3■□□□□ 0.84
DDX39A-204ENST00000586558 SPAG5Q96R06 1193 aa20.3■□□□□ 0.84
DDX39A-204ENST00000586558 DUSP16Q9BY84 665 aa20.3■□□□□ 0.84
DDX39A-204ENST00000586558 XPO4Q9C0E2 1151 aaKnown RBP20.3■□□□□ 0.84
DDX39A-204ENST00000586558 GPR88Q9GZN0 384 aa20.3■□□□□ 0.84
DDX39A-204ENST00000586558 ASAH2Q9NR71 780 aa20.3■□□□□ 0.84
DDX39A-204ENST00000586558 TMEM30AQ9NV96 361 aa20.3■□□□□ 0.84
DDX39A-204ENST00000586558 DNMT3BQ9UBC3 853 aaKnown RBP20.3■□□□□ 0.84
DDX39A-204ENST00000586558 MED7O43513 233 aa20.29■□□□□ 0.84
DDX39A-204ENST00000586558 RHOP08100 348 aa20.29■□□□□ 0.84
DDX39A-204ENST00000586558 GNA15P30679 374 aa20.29■□□□□ 0.84
DDX39A-204ENST00000586558 GPR15P49685 360 aa20.29■□□□□ 0.84
DDX39A-204ENST00000586558 CACNA2D1P54289 1103 aa20.29■□□□□ 0.84
DDX39A-204ENST00000586558 BCAT1P54687 386 aa20.29■□□□□ 0.84
DDX39A-204ENST00000586558 JAM2P57087 298 aa20.29■□□□□ 0.84
DDX39A-204ENST00000586558 FIGNQ5HY92 759 aa20.29■□□□□ 0.84
DDX39A-204ENST00000586558 CYP4A22Q5TCH4 519 aa20.29■□□□□ 0.84
DDX39A-204ENST00000586558 CACNA2D4Q7Z3S7 1137 aa20.29■□□□□ 0.84
DDX39A-204ENST00000586558 FMNL3Q8IVF7 1028 aa20.29■□□□□ 0.84
DDX39A-204ENST00000586558 GIPC2Q8TF65 315 aa20.29■□□□□ 0.84
DDX39A-204ENST00000586558 TFAP2BQ92481 460 aa20.29■□□□□ 0.84
DDX39A-204ENST00000586558 TRMT2BQ96GJ1 504 aaKnown RBP20.29■□□□□ 0.84
DDX39A-204ENST00000586558 ASB2Q96Q27 587 aa20.29■□□□□ 0.84
DDX39A-204ENST00000586558 SMOQ99835 787 aa20.29■□□□□ 0.84
DDX39A-204ENST00000586558 CORO1BQ9BR76 489 aa20.29■□□□□ 0.84
DDX39A-204ENST00000586558 EDEM3Q9BZQ6 932 aa20.29■□□□□ 0.84
DDX39A-204ENST00000586558 NLRC4Q9NPP4 1024 aa20.29■□□□□ 0.84
DDX39A-204ENST00000586558 UXTQ9UBK9 157 aaPredicted RBP20.29■□□□□ 0.84
DDX39A-204ENST00000586558 TSPAN16Q9UKR8 245 aa20.29■□□□□ 0.84
DDX39A-204ENST00000586558 MYO6Q9UM54 1294 aa20.29■□□□□ 0.84
DDX39A-204ENST00000586558 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.29■□□□□ 0.84
DDX39A-204ENST00000586558 EYSQ5T1H1 3165 aa20.29■□□□□ 0.84
DDX39A-204ENST00000586558 PTPRDP23468 1912 aa20.28■□□□□ 0.84
DDX39A-204ENST00000586558 SLC38A8A6NNN8 435 aa20.28■□□□□ 0.84
DDX39A-204ENST00000586558 ZNF197O14709 1029 aa20.28■□□□□ 0.84
DDX39A-204ENST00000586558 CYP26A1O43174 497 aa20.28■□□□□ 0.84
DDX39A-204ENST00000586558 SETSIPP0DME0 302 aa20.28■□□□□ 0.84
DDX39A-204ENST00000586558 BRD2P25440 801 aaKnown RBP20.28■□□□□ 0.84
DDX39A-204ENST00000586558 STAT1P42224 750 aa20.28■□□□□ 0.84
DDX39A-204ENST00000586558 GOLGA7BQ2TAP0 167 aa20.28■□□□□ 0.84
DDX39A-204ENST00000586558 CLEC20AQ6ZU45 233 aa20.28■□□□□ 0.84
DDX39A-204ENST00000586558 DENND5BQ6ZUT9 1274 aa20.28■□□□□ 0.84
DDX39A-204ENST00000586558 MYRFLQ96LU7 910 aa20.28■□□□□ 0.84
DDX39A-204ENST00000586558 NUP58Q9BVL2 599 aa20.28■□□□□ 0.84
DDX39A-204ENST00000586558 POMKQ9H5K3 350 aa20.28■□□□□ 0.84
DDX39A-204ENST00000586558 HCFC1R1Q9NWW0 138 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms