RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 UBA3Q8TBC4 463 aa21.58■■□□□ 1.04
ATG4D-204ENST00000586417 ARGLU1Q9NWB6 273 aaPredicted RBP21.58■■□□□ 1.04
ATG4D-204ENST00000586417 A8MXQ7 604 aa21.57■■□□□ 1.04
ATG4D-204ENST00000586417 F8W810 466 aa21.57■■□□□ 1.04
ATG4D-204ENST00000586417 ERBB2P04626 1255 aa21.57■■□□□ 1.04
ATG4D-204ENST00000586417 MAN1A1P33908 653 aa21.57■■□□□ 1.04
ATG4D-204ENST00000586417 GABRB2P47870 512 aa21.57■■□□□ 1.04
ATG4D-204ENST00000586417 TUSC3Q13454 348 aa21.57■■□□□ 1.04
ATG4D-204ENST00000586417 GOLGA7BQ2TAP0 167 aa21.57■■□□□ 1.04
ATG4D-204ENST00000586417 XYLT1Q86Y38 959 aa21.57■■□□□ 1.04
ATG4D-204ENST00000586417 CRYBG2Q8N1P7 616 aa21.57■■□□□ 1.04
ATG4D-204ENST00000586417 C3orf58Q8NDZ4 430 aa21.57■■□□□ 1.04
ATG4D-204ENST00000586417 KANSL3Q9P2N6 904 aa21.57■■□□□ 1.04
ATG4D-204ENST00000586417 SLC4A7Q9Y6M7 1214 aa21.57■■□□□ 1.04
ATG4D-204ENST00000586417 CHD9Q3L8U1 2897 aa21.57■■□□□ 1.04
ATG4D-204ENST00000586417 CCDC151A5D8V7 595 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 GJB5O95377 273 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 FGGP02679 453 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 WARSP23381 471 aaKnown RBP21.56■■□□□ 1.04
ATG4D-204ENST00000586417 LMO2P25791 158 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 GNL1P36915 607 aaPredicted RBP21.56■■□□□ 1.04
ATG4D-204ENST00000586417 BRD3Q15059 726 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 SHHQ15465 462 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 UPP1Q16831 310 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 RASIP1Q5U651 963 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 ARHGAP17Q68EM7 881 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 AADACL2Q6P093 401 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 OSTM1Q86WC4 334 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 COLGALT2Q8IYK4 626 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 ADGRF2Q8IZF7 708 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 HDAC7Q8WUI4 952 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 C18orf8Q96DM3 657 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 MCEEQ96PE7 176 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 NRDE2Q9H7Z3 1164 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 FAM49BQ9NUQ9 324 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 ZNF446Q9NWS9 450 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 PODXLO00592 558 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 HUS1O60921 280 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 TUBBP07437 444 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 PYGMP11217 842 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 RGS19P49795 217 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 OGDHQ02218 1023 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 TAP1Q03518 808 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 DAB2IPQ5VWQ8 1189 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 TTC30AQ86WT1 665 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 LPIN3Q9BQK8 851 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 AP1M1Q9BXS5 423 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 SNX25Q9H3E2 840 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 IP6K2Q9UHH9 426 aa21.56■■□□□ 1.04
ATG4D-204ENST00000586417 CYB561D2O14569 222 aa21.55■■□□□ 1.04
ATG4D-204ENST00000586417 FAM163BP0C2L3 166 aa21.55■■□□□ 1.04
ATG4D-204ENST00000586417 RWDD2BP57060 319 aa21.55■■□□□ 1.04
ATG4D-204ENST00000586417 PSMC1P62191 440 aaKnown RBP21.55■■□□□ 1.04
ATG4D-204ENST00000586417 MRPS25P82663 173 aaKnown RBP21.55■■□□□ 1.04
ATG4D-204ENST00000586417 ZNF268Q14587 947 aaPredicted RBP21.55■■□□□ 1.04
ATG4D-204ENST00000586417 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.55■■□□□ 1.04
ATG4D-204ENST00000586417 KRT12Q99456 494 aa21.55■■□□□ 1.04
ATG4D-204ENST00000586417 GDF15Q99988 308 aa21.55■■□□□ 1.04
ATG4D-204ENST00000586417 WDR35Q9P2L0 1181 aa21.55■■□□□ 1.04
ATG4D-204ENST00000586417 DMGDHQ9UI17 866 aaKnown RBP21.55■■□□□ 1.04
ATG4D-204ENST00000586417 SIGLEC16A6NMB1 481 aa21.54■■□□□ 1.04
ATG4D-204ENST00000586417 KRIT1O00522 736 aa21.54■■□□□ 1.04
ATG4D-204ENST00000586417 ITGB1P05556 798 aa21.54■■□□□ 1.04
ATG4D-204ENST00000586417 PDGFRBP09619 1106 aa21.54■■□□□ 1.04
ATG4D-204ENST00000586417 ATP2A2P16615 1042 aaKnown RBP21.54■■□□□ 1.04
ATG4D-204ENST00000586417 RPL9P32969 192 aaKnown RBP21.54■■□□□ 1.04
ATG4D-204ENST00000586417 PBX3P40426 434 aa21.54■■□□□ 1.04
ATG4D-204ENST00000586417 TAS2R40P59535 323 aa21.54■■□□□ 1.04
ATG4D-204ENST00000586417 GLE1Q53GS7 698 aaKnown RBP21.54■■□□□ 1.04
ATG4D-204ENST00000586417 C8orf74Q6P047 294 aa21.54■■□□□ 1.04
ATG4D-204ENST00000586417 CC2D1AQ6P1N0 951 aaPredicted RBP21.54■■□□□ 1.04
ATG4D-204ENST00000586417 CD300LGQ6UXG3 332 aa21.54■■□□□ 1.04
ATG4D-204ENST00000586417 HERC6Q8IVU3 1022 aa21.54■■□□□ 1.04
ATG4D-204ENST00000586417 MCRS1Q96EZ8 462 aa21.54■■□□□ 1.04
ATG4D-204ENST00000586417 DDX27Q96GQ7 796 aaKnown RBP21.54■■□□□ 1.04
ATG4D-204ENST00000586417 FAM193BQ96PV7 902 aaPredicted RBP21.54■■□□□ 1.04
ATG4D-204ENST00000586417 YME1L1Q96TA2 773 aa21.54■■□□□ 1.04
ATG4D-204ENST00000586417 MRPL9Q9BYD2 267 aaKnown RBP21.54■■□□□ 1.04
ATG4D-204ENST00000586417 LCMT1Q9UIC8 334 aa21.54■■□□□ 1.04
ATG4D-204ENST00000586417 NR2E1Q9Y466 385 aa21.54■■□□□ 1.04
ATG4D-204ENST00000586417 CHD7Q9P2D1 2997 aa21.54■■□□□ 1.04
ATG4D-204ENST00000586417 GOLGA8SH3BPF8 625 aa21.53■■□□□ 1.04
ATG4D-204ENST00000586417 CCDC188H7C350 402 aa21.53■■□□□ 1.04
ATG4D-204ENST00000586417 GABRDO14764 452 aa21.53■■□□□ 1.04
ATG4D-204ENST00000586417 AARSP49588 968 aaKnown RBP eCLIP21.53■■□□□ 1.04
ATG4D-204ENST00000586417 LONRF2Q1L5Z9 754 aa21.53■■□□□ 1.04
ATG4D-204ENST00000586417 FAM109BQ6ICB4 259 aaPredicted RBP21.53■■□□□ 1.04
ATG4D-204ENST00000586417 CCDC70Q6NSX1 233 aa21.53■■□□□ 1.04
ATG4D-204ENST00000586417 DCUN1D2Q6PH85 259 aa21.53■■□□□ 1.04
ATG4D-204ENST00000586417 LRRC43Q8N309 656 aa21.53■■□□□ 1.04
ATG4D-204ENST00000586417 HASPINQ8TF76 798 aa21.53■■□□□ 1.04
ATG4D-204ENST00000586417 SENP8Q96LD8 212 aa21.53■■□□□ 1.04
ATG4D-204ENST00000586417 CWH43Q9H720 699 aa21.53■■□□□ 1.04
ATG4D-204ENST00000586417 SYNCQ9H7C4 482 aa21.53■■□□□ 1.04
ATG4D-204ENST00000586417 TULP2O00295 520 aa21.53■■□□□ 1.04
ATG4D-204ENST00000586417 SETSIPP0DME0 302 aa21.53■■□□□ 1.04
ATG4D-204ENST00000586417 RFC1P35251 1148 aaPredicted RBP21.53■■□□□ 1.04
ATG4D-204ENST00000586417 OR1G1P47890 313 aa21.53■■□□□ 1.04
ATG4D-204ENST00000586417 HTRA4P83105 476 aaPredicted RBP21.53■■□□□ 1.04
ATG4D-204ENST00000586417 BTG3Q14201 252 aaPredicted RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms