RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 KBTBD7Q8WVZ9 684 aa12.76□□□□□ -0.37
BRCA1-225ENST00000586385 ATP2A3Q93084 1043 aa12.76□□□□□ -0.37
BRCA1-225ENST00000586385 HVCN1Q96D96 273 aa12.76□□□□□ -0.37
BRCA1-225ENST00000586385 CBWD1Q9BRT8 395 aa12.76□□□□□ -0.37
BRCA1-225ENST00000586385 TPSD1Q9BZJ3 242 aa12.76□□□□□ -0.37
BRCA1-225ENST00000586385 TBC1D7Q9P0N9 293 aa12.76□□□□□ -0.37
BRCA1-225ENST00000586385 KIF3AQ9Y496 699 aa12.76□□□□□ -0.37
BRCA1-225ENST00000586385 NME7Q9Y5B8 376 aa12.76□□□□□ -0.37
BRCA1-225ENST00000586385 PTPRJQ12913 1337 aa12.76□□□□□ -0.37
BRCA1-225ENST00000586385 TRAV19A0A0A6YYK7 116 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 GOLGA8IPA6NC78 632 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 GOLGA8JA6NMD2 632 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 H3BQV1 296 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 HUS1O60921 280 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 RHOBTB1O94844 696 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 CKMP06732 381 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 LMO2P25791 158 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 ABCD1P33897 745 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 IFNAR2P48551 515 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 DGKEP52429 567 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 AMPD2Q01433 879 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 POSTNQ15063 836 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 L1TD1Q5T7N2 865 aaKnown RBP12.75□□□□□ -0.37
BRCA1-225ENST00000586385 TMEM92Q6UXU6 159 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 ADGRF2Q8IZF7 708 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 ABCA7Q8IZY2 2146 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 TMEM86AQ8N2M4 240 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 TTC16Q8NEE8 873 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 ACDQ96AP0 544 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 MTMR12Q9C0I1 747 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 PDE11AQ9HCR9 933 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 CRTAC1Q9NQ79 661 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 UXTQ9UBK9 157 aaPredicted RBP12.75□□□□□ -0.37
BRCA1-225ENST00000586385 ARHGAP26Q9UNA1 814 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 SNX9Q9Y5X1 595 aa12.75□□□□□ -0.37
BRCA1-225ENST00000586385 IGF2RP11717 2491 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 KIAA1549LQ6ZVL6 1849 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 NEFLP07196 543 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 MAGEA11P43364 429 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 SEC13P55735 322 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 PSMC1P62191 440 aaKnown RBP12.74□□□□□ -0.37
BRCA1-225ENST00000586385 MYL7Q01449 175 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 PSMD2Q13200 908 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 RABEP1Q15276 862 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 C2orf27AQ580R0 203 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 SH3PXD2AQ5TCZ1 1133 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 LMBRD2Q68DH5 695 aaPredicted RBP12.74□□□□□ -0.37
BRCA1-225ENST00000586385 ANO7Q6IWH7 933 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 SCN4BQ8IWT1 228 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 CCDC33Q8N5R6 958 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 CSGALNACT2Q8N6G5 542 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 TOP6BLQ8N6T0 577 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 FRMD1Q8N878 549 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 KRI1Q8N9T8 703 aaKnown RBP12.74□□□□□ -0.37
BRCA1-225ENST00000586385 MDGA1Q8NFP4 955 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 TSTD1Q8NFU3 115 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 OR5B17Q8NGF7 314 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 OLIG1Q8TAK6 271 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 FUBP3Q96I24 572 aaKnown RBP eCLIP12.74□□□□□ -0.37
BRCA1-225ENST00000586385 CNOT6LQ96LI5 555 aaKnown RBP12.74□□□□□ -0.37
BRCA1-225ENST00000586385 RNF38Q9H0F5 515 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 MRPL44Q9H9J2 332 aaKnown RBP12.74□□□□□ -0.37
BRCA1-225ENST00000586385 TMEM30AQ9NV96 361 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 RBAKQ9NYW8 714 aaPredicted RBP12.74□□□□□ -0.37
BRCA1-225ENST00000586385 FBXO2Q9UK22 296 aaPredicted RBP12.74□□□□□ -0.37
BRCA1-225ENST00000586385 ITGA11Q9UKX5 1188 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 CLIC4Q9Y696 253 aa12.74□□□□□ -0.37
BRCA1-225ENST00000586385 ZZEF1O43149 2961 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 A0A087X0B3 334 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 FRMD3A2A2Y4 597 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 LEFTY2O00292 366 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 SCAMP3O14828 347 aaKnown RBP12.73□□□□□ -0.37
BRCA1-225ENST00000586385 OLFM2O95897 454 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 BMP15O95972 392 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 CYP17A1P05093 508 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 HDCP19113 662 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 GARTP22102 1010 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 GBP1P32455 592 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 SLC6A11P48066 632 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 IRX4P78413 519 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 RBP5P82980 135 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 ZNF252P-AS1Q0IIN9 211 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 UNQ6494/PRO21346Q6UXR6 183 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 C12orf40Q86WS4 652 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 SPATA2LQ8IUW3 424 aaPredicted RBP12.73□□□□□ -0.37
BRCA1-225ENST00000586385 GLIS3Q8NEA6 775 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 RASSF8Q8NHQ8 419 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 SPATA18Q8TC71 538 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 MYLPFQ96A32 169 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 ACCSQ96QU6 501 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 SYT15Q9BQS2 421 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 SEL1LQ9UBV2 794 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 STK17AQ9UEE5 414 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 ZMIZ1Q9ULJ6 1067 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 MMP17Q9ULZ9 603 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 MYO16Q9Y6X6 1858 aa12.73□□□□□ -0.37
BRCA1-225ENST00000586385 ZNF840PA6NDX5 716 aa12.72□□□□□ -0.37
BRCA1-225ENST00000586385 GCNT3O95395 438 aa12.72□□□□□ -0.37
BRCA1-225ENST00000586385 HOXB3P14651 431 aaPredicted RBP12.72□□□□□ -0.37
BRCA1-225ENST00000586385 BDNFP23560 247 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms