RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 RARGP13631 454 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 ATF2P15336 505 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 GPD1P21695 349 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 RFC1P35251 1148 aaPredicted RBP11.85□□□□□ -0.51
LIG3-204ENST00000585740 SCNN1AP37088 669 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 PSMC4P43686 418 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 KCNJ1P48048 391 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 GYS2P54840 703 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 SKOR1P84550 965 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 OGDHQ02218 1023 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 SNX1Q13596 522 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 HIC1Q14526 733 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 GOLGA7BQ2TAP0 167 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 TTMPQ5BVD1 217 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 TFDP3Q5H9I0 405 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 GNASQ5JWF2 1037 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 EMC10Q5UCC4 262 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 DENND2CQ68D51 928 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 MFSD7Q6UXD7 560 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 DPH6Q7L8W6 267 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 RPAINQ86UA6 219 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 FBXO25Q8TCJ0 367 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 RNF25Q96BH1 459 aaPredicted RBP11.85□□□□□ -0.51
LIG3-204ENST00000585740 ARL8AQ96BM9 186 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 CCDC114Q96M63 670 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 CNPY3Q9BT09 278 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 APOL6Q9BWW8 343 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 HEMGNQ9BXL5 484 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 PABPC3Q9H361 631 aaKnown RBP11.85□□□□□ -0.51
LIG3-204ENST00000585740 SNX25Q9H3E2 840 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 CHST12Q9NRB3 414 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 CHST7Q9NS84 486 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 GTF2IRD1Q9UHL9 959 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 PTPN22Q9Y2R2 807 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 NFS1Q9Y697 457 aa11.85□□□□□ -0.51
LIG3-204ENST00000585740 LRRD1A4D1F6 860 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 SEPT4O43236 478 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 LIASO43766 372 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 CAPN2P17655 700 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 LRPAP1P30533 357 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 RDXP35241 583 aaKnown RBP11.84□□□□□ -0.51
LIG3-204ENST00000585740 FLT3P36888 993 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 ACADSBP45954 432 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 ZNF143P52747 638 aaPredicted RBP11.84□□□□□ -0.51
LIG3-204ENST00000585740 ZNF200P98182 395 aaPredicted RBP11.84□□□□□ -0.51
LIG3-204ENST00000585740 SLC25A11Q02978 314 aaKnown RBP11.84□□□□□ -0.51
LIG3-204ENST00000585740 IFFO1Q0D2I5 559 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 ORC1Q13415 861 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 TAZQ16635 292 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 FAM102AQ5T9C2 384 aaPredicted RBP11.84□□□□□ -0.51
LIG3-204ENST00000585740 TWF2Q6IBS0 349 aaKnown RBP11.84□□□□□ -0.51
LIG3-204ENST00000585740 OR6B2Q6IFH4 312 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 KDM7AQ6ZMT4 941 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 TRMT10CQ7L0Y3 403 aaKnown RBP11.84□□□□□ -0.51
LIG3-204ENST00000585740 SESTD1Q86VW0 696 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 FAM228AQ86W67 206 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 CRYBG2Q8N1P7 616 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 TOP6BLQ8N6T0 577 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 TRPV1Q8NER1 839 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 OR6B3Q8NGW1 331 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 JOSD2Q8TAC2 188 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 TMEM40Q8WWA1 233 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 C18orf25Q96B23 403 aaPredicted RBP11.84□□□□□ -0.51
LIG3-204ENST00000585740 ARMC5Q96C12 935 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 MRPL45Q9BRJ2 306 aaKnown RBP11.84□□□□□ -0.51
LIG3-204ENST00000585740 TRAIPQ9BWF2 469 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 SLC4A5Q9BY07 1137 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 SLC38A7Q9NVC3 462 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 R3HDM2Q9Y2K5 976 aaKnown RBP11.84□□□□□ -0.51
LIG3-204ENST00000585740 ATP8A1Q9Y2Q0 1164 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 IPPQ9Y573 584 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 CDY2AQ9Y6F7 541 aa11.84□□□□□ -0.51
LIG3-204ENST00000585740 A8MXQ7 604 aa11.83□□□□□ -0.52
LIG3-204ENST00000585740 KPNA7A9QM74 516 aa11.83□□□□□ -0.52
LIG3-204ENST00000585740 SHOX2O60902 331 aaPredicted RBP11.83□□□□□ -0.52
LIG3-204ENST00000585740 HUS1O60921 280 aa11.83□□□□□ -0.52
LIG3-204ENST00000585740 LRCH4O75427 683 aa11.83□□□□□ -0.52
LIG3-204ENST00000585740 RPS6KA5O75582 802 aa11.83□□□□□ -0.52
LIG3-204ENST00000585740 KRT14P02533 472 aa11.83□□□□□ -0.52
LIG3-204ENST00000585740 AKAP5P24588 427 aa11.83□□□□□ -0.52
LIG3-204ENST00000585740 ACTN2P35609 894 aa11.83□□□□□ -0.52
LIG3-204ENST00000585740 GNL1P36915 607 aaPredicted RBP11.83□□□□□ -0.52
LIG3-204ENST00000585740 ADCY8P40145 1251 aa11.83□□□□□ -0.52
LIG3-204ENST00000585740 CDKN2BP42772 138 aa11.83□□□□□ -0.52
LIG3-204ENST00000585740 CDR1P51861 262 aa11.83□□□□□ -0.52
LIG3-204ENST00000585740 BCAT1P54687 386 aa11.83□□□□□ -0.52
LIG3-204ENST00000585740 ZNF844Q08AG5 666 aa11.83□□□□□ -0.52
LIG3-204ENST00000585740 BYSLQ13895 437 aaKnown RBP11.83□□□□□ -0.52
LIG3-204ENST00000585740 PKDCCQ504Y2 493 aa11.83□□□□□ -0.52
LIG3-204ENST00000585740 PPP1R26Q5T8A7 1209 aaPredicted RBP11.83□□□□□ -0.52
LIG3-204ENST00000585740 DAB2IPQ5VWQ8 1189 aa11.83□□□□□ -0.52
LIG3-204ENST00000585740 ARCQ7LC44 396 aa11.83□□□□□ -0.52
LIG3-204ENST00000585740 GSTA5Q7RTV2 222 aa11.83□□□□□ -0.52
LIG3-204ENST00000585740 LIMS2Q7Z4I7 341 aa11.83□□□□□ -0.52
LIG3-204ENST00000585740 TMEM110Q86TL2 294 aa11.83□□□□□ -0.52
LIG3-204ENST00000585740 ACOT1Q86TX2 421 aa11.83□□□□□ -0.52
LIG3-204ENST00000585740 VSIG1Q86XK7 387 aa11.83□□□□□ -0.52
LIG3-204ENST00000585740 APPL2Q8NEU8 664 aa11.83□□□□□ -0.52
LIG3-204ENST00000585740 UBA3Q8TBC4 463 aa11.83□□□□□ -0.52
LIG3-204ENST00000585740 CD99L2Q8TCZ2 262 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms