RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 IRF2BP1Q8IU81 584 aa17.29■□□□□ 0.36
ERBB2-222ENST00000584908 SMARCD2Q92925 531 aa17.29■□□□□ 0.36
ERBB2-222ENST00000584908 ELSPBP1Q96BH3 223 aa17.29■□□□□ 0.36
ERBB2-222ENST00000584908 RPP25Q9BUL9 199 aaKnown RBP17.29■□□□□ 0.36
ERBB2-222ENST00000584908 ZNF518BQ9C0D4 1074 aa17.29■□□□□ 0.36
ERBB2-222ENST00000584908 SLC2A4RGQ9NR83 387 aa17.29■□□□□ 0.36
ERBB2-222ENST00000584908 TMEM30AQ9NV96 361 aa17.29■□□□□ 0.36
ERBB2-222ENST00000584908 UXTQ9UBK9 157 aaPredicted RBP17.29■□□□□ 0.36
ERBB2-222ENST00000584908 DACH1Q9UI36 760 aa17.29■□□□□ 0.36
ERBB2-222ENST00000584908 ZNF318Q5VUA4 2279 aa17.29■□□□□ 0.36
ERBB2-222ENST00000584908 FAM86C2PA6NEL3 165 aa17.28■□□□□ 0.36
ERBB2-222ENST00000584908 GRIK1P39086 918 aa17.28■□□□□ 0.36
ERBB2-222ENST00000584908 KCNH2Q12809 1159 aa17.28■□□□□ 0.36
ERBB2-222ENST00000584908 FAM35AQ86V20 835 aa17.28■□□□□ 0.36
ERBB2-222ENST00000584908 SCN4BQ8IWT1 228 aa17.28■□□□□ 0.36
ERBB2-222ENST00000584908 FUKQ8N0W3 1084 aa17.28■□□□□ 0.36
ERBB2-222ENST00000584908 LMO3Q8TAP4 145 aa17.28■□□□□ 0.36
ERBB2-222ENST00000584908 TATDN2Q93075 761 aa17.28■□□□□ 0.36
ERBB2-222ENST00000584908 TWNKQ96RR1 684 aa17.28■□□□□ 0.36
ERBB2-222ENST00000584908 TTLL2Q9BWV7 592 aa17.28■□□□□ 0.36
ERBB2-222ENST00000584908 NT5C1AQ9BXI3 368 aa17.28■□□□□ 0.36
ERBB2-222ENST00000584908 ATXN3LQ9H3M9 355 aa17.28■□□□□ 0.36
ERBB2-222ENST00000584908 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.28■□□□□ 0.36
ERBB2-222ENST00000584908 KIF26AQ9ULI4 1882 aaPredicted RBP17.28■□□□□ 0.36
ERBB2-222ENST00000584908 ATP8B3O60423 1300 aa17.28■□□□□ 0.36
ERBB2-222ENST00000584908 F8VP50 259 aa17.27■□□□□ 0.36
ERBB2-222ENST00000584908 NARSO43776 548 aaKnown RBP17.27■□□□□ 0.36
ERBB2-222ENST00000584908 CACNA2D1P54289 1103 aa17.27■□□□□ 0.36
ERBB2-222ENST00000584908 ARHGAP15Q53QZ3 475 aa17.27■□□□□ 0.36
ERBB2-222ENST00000584908 STXBP5Q5T5C0 1151 aa17.27■□□□□ 0.36
ERBB2-222ENST00000584908 TANGO2Q6ICL3 276 aa17.27■□□□□ 0.36
ERBB2-222ENST00000584908 DENND5BQ6ZUT9 1274 aa17.27■□□□□ 0.36
ERBB2-222ENST00000584908 ZSCAN18Q8TBC5 510 aaPredicted RBP17.27■□□□□ 0.36
ERBB2-222ENST00000584908 E2F7Q96AV8 911 aa17.27■□□□□ 0.36
ERBB2-222ENST00000584908 THAP9Q9H5L6 903 aa17.27■□□□□ 0.36
ERBB2-222ENST00000584908 TASP1Q9H6P5 420 aa17.27■□□□□ 0.36
ERBB2-222ENST00000584908 ZFP14Q9HCL3 533 aa17.27■□□□□ 0.36
ERBB2-222ENST00000584908 CSNK1G1Q9HCP0 422 aa17.27■□□□□ 0.36
ERBB2-222ENST00000584908 WNT16Q9UBV4 365 aa17.27■□□□□ 0.36
ERBB2-222ENST00000584908 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.27■□□□□ 0.36
ERBB2-222ENST00000584908 CLDN5O00501 218 aa17.26■□□□□ 0.35
ERBB2-222ENST00000584908 TADA3O75528 432 aa17.26■□□□□ 0.35
ERBB2-222ENST00000584908 AFPP02771 609 aaKnown RBP17.26■□□□□ 0.35
ERBB2-222ENST00000584908 TRIM21P19474 475 aaKnown RBP17.26■□□□□ 0.35
ERBB2-222ENST00000584908 DDX6P26196 483 aaKnown RBP eCLIP17.26■□□□□ 0.35
ERBB2-222ENST00000584908 ANXA13P27216 316 aa17.26■□□□□ 0.35
ERBB2-222ENST00000584908 CETN1Q12798 172 aa17.26■□□□□ 0.35
ERBB2-222ENST00000584908 CUL2Q13617 745 aa17.26■□□□□ 0.35
ERBB2-222ENST00000584908 HFE2Q6ZVN8 426 aa17.26■□□□□ 0.35
ERBB2-222ENST00000584908 UBR7Q8N806 425 aa17.26■□□□□ 0.35
ERBB2-222ENST00000584908 STKLD1Q8NE28 680 aa17.26■□□□□ 0.35
ERBB2-222ENST00000584908 SMARCD1Q96GM5 515 aa17.26■□□□□ 0.35
ERBB2-222ENST00000584908 CNOT6LQ96LI5 555 aaKnown RBP17.26■□□□□ 0.35
ERBB2-222ENST00000584908 GCNAQ96QF7 691 aa17.26■□□□□ 0.35
ERBB2-222ENST00000584908 HNRNPABQ99729 332 aaKnown RBP17.26■□□□□ 0.35
ERBB2-222ENST00000584908 ARID3AQ99856 593 aa17.26■□□□□ 0.35
ERBB2-222ENST00000584908 KXD1Q9BQD3 176 aa17.26■□□□□ 0.35
ERBB2-222ENST00000584908 PLA2G2FQ9BZM2 168 aa17.26■□□□□ 0.35
ERBB2-222ENST00000584908 DNAI2Q9GZS0 605 aa17.26■□□□□ 0.35
ERBB2-222ENST00000584908 SLITRK6Q9H5Y7 841 aa17.26■□□□□ 0.35
ERBB2-222ENST00000584908 CISHQ9NSE2 258 aa17.26■□□□□ 0.35
ERBB2-222ENST00000584908 EHD2Q9NZN4 543 aa17.26■□□□□ 0.35
ERBB2-222ENST00000584908 COL4A2P08572 1712 aa17.26■□□□□ 0.35
ERBB2-222ENST00000584908 CD58P19256 250 aa17.25■□□□□ 0.35
ERBB2-222ENST00000584908 TBXAS1P24557 533 aaPredicted RBP17.25■□□□□ 0.35
ERBB2-222ENST00000584908 CYP4F8P98187 520 aa17.25■□□□□ 0.35
ERBB2-222ENST00000584908 ORC1Q13415 861 aa17.25■□□□□ 0.35
ERBB2-222ENST00000584908 GPR158Q5T848 1215 aa17.25■□□□□ 0.35
ERBB2-222ENST00000584908 C12orf29Q8N999 325 aa17.25■□□□□ 0.35
ERBB2-222ENST00000584908 ST13P5Q8NFI4 369 aaPredicted RBP17.25■□□□□ 0.35
ERBB2-222ENST00000584908 SLC2A14Q8TDB8 520 aa17.25■□□□□ 0.35
ERBB2-222ENST00000584908 SLC46A2Q9BY10 475 aa17.25■□□□□ 0.35
ERBB2-222ENST00000584908 DMAP1Q9NPF5 467 aaPredicted RBP17.25■□□□□ 0.35
ERBB2-222ENST00000584908 OBP2AQ9NY56 170 aa17.25■□□□□ 0.35
ERBB2-222ENST00000584908 IL37Q9NZH6 218 aa17.25■□□□□ 0.35
ERBB2-222ENST00000584908 MAGED2Q9UNF1 606 aaPredicted RBP17.25■□□□□ 0.35
ERBB2-222ENST00000584908 HELZP42694 1942 aaKnown RBP17.25■□□□□ 0.35
ERBB2-222ENST00000584908 KMT2EQ8IZD2 1858 aa17.25■□□□□ 0.35
ERBB2-222ENST00000584908 TNFRSF10BO14763 440 aa17.24■□□□□ 0.35
ERBB2-222ENST00000584908 CCDC130P13994 396 aa17.24■□□□□ 0.35
ERBB2-222ENST00000584908 RAD23BP54727 409 aa17.24■□□□□ 0.35
ERBB2-222ENST00000584908 USP46P62068 366 aa17.24■□□□□ 0.35
ERBB2-222ENST00000584908 YWHAEP62258 255 aaKnown RBP17.24■□□□□ 0.35
ERBB2-222ENST00000584908 GPC5P78333 572 aa17.24■□□□□ 0.35
ERBB2-222ENST00000584908 CCDC183Q5T5S1 534 aa17.24■□□□□ 0.35
ERBB2-222ENST00000584908 VITQ6UXI7 678 aa17.24■□□□□ 0.35
ERBB2-222ENST00000584908 MON1AQ86VX9 555 aa17.24■□□□□ 0.35
ERBB2-222ENST00000584908 ARID3BQ8IVW6 561 aaPredicted RBP17.24■□□□□ 0.35
ERBB2-222ENST00000584908 MFSD6LQ8IWD5 586 aa17.24■□□□□ 0.35
ERBB2-222ENST00000584908 CMTM8Q8IZV2 173 aa17.24■□□□□ 0.35
ERBB2-222ENST00000584908 SLC4A11Q8NBS3 891 aa17.24■□□□□ 0.35
ERBB2-222ENST00000584908 EHBP1Q8NDI1 1231 aa17.24■□□□□ 0.35
ERBB2-222ENST00000584908 ZMIZ2Q8NF64 920 aa17.24■□□□□ 0.35
ERBB2-222ENST00000584908 DEPDC1BQ8WUY9 529 aa17.24■□□□□ 0.35
ERBB2-222ENST00000584908 MRPS31Q92665 395 aaKnown RBP17.24■□□□□ 0.35
ERBB2-222ENST00000584908 NT5C1BQ96P26 610 aa17.24■□□□□ 0.35
ERBB2-222ENST00000584908 KCNK16Q96T55 309 aa17.24■□□□□ 0.35
ERBB2-222ENST00000584908 SMOQ99835 787 aa17.24■□□□□ 0.35
ERBB2-222ENST00000584908 MED10Q9BTT4 135 aa17.24■□□□□ 0.35
ERBB2-222ENST00000584908 KRT82Q9NSB4 513 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms