RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 GAD2Q05329 585 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 CCNG2Q16589 344 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 ZC3H12AQ5D1E8 599 aaKnown RBP11.84□□□□□ -0.51
TOP3A-217ENST00000584582 RWDD4Q6NW29 188 aaKnown RBP11.84□□□□□ -0.51
TOP3A-217ENST00000584582 APBB1IPQ7Z5R6 666 aaPredicted RBP11.84□□□□□ -0.51
TOP3A-217ENST00000584582 DDX27Q96GQ7 796 aaKnown RBP11.84□□□□□ -0.51
TOP3A-217ENST00000584582 MROH8Q9H579 483 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 SLC5A4Q9NY91 659 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 PCYOX1Q9UHG3 505 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 ABT1Q9ULW3 272 aaKnown RBP11.84□□□□□ -0.51
TOP3A-217ENST00000584582 MAST2Q6P0Q8 1798 aa11.84□□□□□ -0.51
TOP3A-217ENST00000584582 ZC3H4Q9UPT8 1303 aaKnown RBP11.83□□□□□ -0.51
TOP3A-217ENST00000584582 H0Y3Z8 333 aa11.83□□□□□ -0.51
TOP3A-217ENST00000584582 I3L4J1 428 aa11.83□□□□□ -0.51
TOP3A-217ENST00000584582 TULP2O00295 520 aa11.83□□□□□ -0.51
TOP3A-217ENST00000584582 TNPO2O14787 897 aaKnown RBP11.83□□□□□ -0.51
TOP3A-217ENST00000584582 FSCN2O14926 492 aa11.83□□□□□ -0.51
TOP3A-217ENST00000584582 PSTPIP1O43586 416 aa11.83□□□□□ -0.51
TOP3A-217ENST00000584582 MOCS2O96007 188 aaPredicted RBP11.83□□□□□ -0.51
TOP3A-217ENST00000584582 ECHS1P30084 290 aa11.83□□□□□ -0.51
TOP3A-217ENST00000584582 AP3M2P53677 418 aa11.83□□□□□ -0.51
TOP3A-217ENST00000584582 OGDHQ02218 1023 aa11.83□□□□□ -0.51
TOP3A-217ENST00000584582 PKN2Q16513 984 aaKnown RBP11.83□□□□□ -0.51
TOP3A-217ENST00000584582 DGKDQ16760 1214 aa11.83□□□□□ -0.51
TOP3A-217ENST00000584582 ZNF572Q7Z3I7 529 aaPredicted RBP11.83□□□□□ -0.51
TOP3A-217ENST00000584582 FBXO36Q8NEA4 188 aa11.83□□□□□ -0.51
TOP3A-217ENST00000584582 NXF3Q9H4D5 531 aaKnown RBP11.83□□□□□ -0.51
TOP3A-217ENST00000584582 FNDC3AQ9Y2H6 1198 aaKnown RBP11.83□□□□□ -0.51
TOP3A-217ENST00000584582 GPD1P21695 349 aa11.83□□□□□ -0.52
TOP3A-217ENST00000584582 TNFRSF8P28908 595 aa11.83□□□□□ -0.52
TOP3A-217ENST00000584582 PDE1BQ01064 536 aa11.83□□□□□ -0.52
TOP3A-217ENST00000584582 MDH1BQ5I0G3 518 aa11.83□□□□□ -0.52
TOP3A-217ENST00000584582 PACS2Q86VP3 889 aa11.83□□□□□ -0.52
TOP3A-217ENST00000584582 MREGQ8N565 214 aa11.83□□□□□ -0.52
TOP3A-217ENST00000584582 GIMAP7Q8NHV1 300 aa11.83□□□□□ -0.52
TOP3A-217ENST00000584582 MAML1Q92585 1016 aa11.83□□□□□ -0.52
TOP3A-217ENST00000584582 FBXL18Q96ME1 805 aa11.83□□□□□ -0.52
TOP3A-217ENST00000584582 CENPFP49454 3210 aa11.83□□□□□ -0.52
TOP3A-217ENST00000584582 MAGEB2O15479 319 aa11.83□□□□□ -0.52
TOP3A-217ENST00000584582 ATXN1P54253 815 aaKnown RBP11.83□□□□□ -0.52
TOP3A-217ENST00000584582 ANKRD20A3Q5VUR7 823 aa11.83□□□□□ -0.52
TOP3A-217ENST00000584582 FYB2Q5VWT5 728 aa11.83□□□□□ -0.52
TOP3A-217ENST00000584582 EXOC3L1Q86VI1 746 aa11.83□□□□□ -0.52
TOP3A-217ENST00000584582 SLITRK1Q96PX8 696 aa11.83□□□□□ -0.52
TOP3A-217ENST00000584582 APOL2Q9BQE5 337 aa11.83□□□□□ -0.52
TOP3A-217ENST00000584582 DNAI2Q9GZS0 605 aa11.83□□□□□ -0.52
TOP3A-217ENST00000584582 AVENQ9NQS1 362 aaPredicted RBP11.83□□□□□ -0.52
TOP3A-217ENST00000584582 C10orf71Q711Q0 1435 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 PPEF2O14830 753 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 MAPK13O15264 365 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 ERBB2P04626 1255 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 GNL1P36915 607 aaPredicted RBP11.82□□□□□ -0.52
TOP3A-217ENST00000584582 CRADDP78560 199 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 EFTUD2Q15029 972 aaKnown RBP eCLIP11.82□□□□□ -0.52
TOP3A-217ENST00000584582 RAB6CQ53S08 254 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 USP33Q8TEY7 942 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 SPOCK2Q92563 424 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 ELOVL4Q9GZR5 314 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 RAB6CQ9H0N0 254 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 TUBGCP4Q9UGJ1 667 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 PGAP2Q9UHJ9 254 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 GRIN2DO15399 1336 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 RECQL4O94761 1208 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 SRGAP2BP0DMP2 458 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 SKOR1P84550 965 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 BMPR2Q13873 1038 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 TFDP2Q14188 446 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 SCN4BQ8IWT1 228 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 C12orf42Q96LP6 360 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 TMEM134Q9H6X4 195 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 NPHS2Q9NP85 383 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 ZDHHC18Q9NUE0 388 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 DDX56Q9NY93 547 aaKnown RBP11.82□□□□□ -0.52
TOP3A-217ENST00000584582 NUDT5Q9UKK9 219 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 TMEM191CA6NGB0 347 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 BTBD19C9JJ37 291 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 ITKQ08881 620 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 UNC45BQ8IWX7 931 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 EIF2AQ9BY44 585 aaKnown RBP11.82□□□□□ -0.52
TOP3A-217ENST00000584582 LRRC19Q9H756 370 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 SLCO1B3Q9NPD5 702 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 WHRNQ9P202 907 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 ZNF112Q9UJU3 913 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 PPP2R3BQ9Y5P8 575 aa11.82□□□□□ -0.52
TOP3A-217ENST00000584582 SPDYE5A6NIY4 337 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 CLDN5O00501 218 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 ASAP2O43150 1006 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 TRAPPC3O43617 180 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 IL18RAPO95256 599 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 CETPP11597 493 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 ACO1P21399 889 aaKnown RBP11.81□□□□□ -0.52
TOP3A-217ENST00000584582 RTP1P59025 263 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 SPARCL1Q14515 664 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 MROH9Q5TGP6 573 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 CES3Q6UWW8 571 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 CYP4X1Q8N118 509 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 ZFP42Q96MM3 310 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 NIFKQ9BYG3 293 aaKnown RBP11.81□□□□□ -0.52
TOP3A-217ENST00000584582 RRAGCQ9HB90 399 aa11.81□□□□□ -0.52
TOP3A-217ENST00000584582 CPSF3Q9UKF6 684 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms