RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 SPPL2BQ8TCT7 592 aa17■□□□□ 0.31
CSNK1D-223ENST00000584472 PKMYT1Q99640 499 aa17■□□□□ 0.31
CSNK1D-223ENST00000584472 STK33Q9BYT3 514 aa17■□□□□ 0.31
CSNK1D-223ENST00000584472 GPR88Q9GZN0 384 aa17■□□□□ 0.31
CSNK1D-223ENST00000584472 SNX25Q9H3E2 840 aa17■□□□□ 0.31
CSNK1D-223ENST00000584472 ABCB6Q9NP58 842 aa17■□□□□ 0.31
CSNK1D-223ENST00000584472 NLRC4Q9NPP4 1024 aa17■□□□□ 0.31
CSNK1D-223ENST00000584472 CDH9Q9ULB4 789 aa17■□□□□ 0.31
CSNK1D-223ENST00000584472 YIPF1Q9Y548 306 aa17■□□□□ 0.31
CSNK1D-223ENST00000584472 NME7Q9Y5B8 376 aa17■□□□□ 0.31
CSNK1D-223ENST00000584472 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17■□□□□ 0.319e-8■□□□□ 9.5
CSNK1D-223ENST00000584472 C2CD4DB7Z1M9 353 aa16.99■□□□□ 0.31
CSNK1D-223ENST00000584472 CILPO75339 1184 aa16.99■□□□□ 0.31
CSNK1D-223ENST00000584472 CDC25BP30305 580 aa16.99■□□□□ 0.31
CSNK1D-223ENST00000584472 TUFMP49411 452 aaKnown RBP16.99■□□□□ 0.31
CSNK1D-223ENST00000584472 NUBP1P53384 320 aa16.99■□□□□ 0.31
CSNK1D-223ENST00000584472 YWHAEP62258 255 aaKnown RBP16.99■□□□□ 0.31
CSNK1D-223ENST00000584472 RAPGEF1Q13905 1077 aa16.99■□□□□ 0.31
CSNK1D-223ENST00000584472 DRAP1Q14919 205 aaPredicted RBP16.99■□□□□ 0.31
CSNK1D-223ENST00000584472 MAPRE1Q15691 268 aaKnown RBP16.99■□□□□ 0.31
CSNK1D-223ENST00000584472 CACNA2D4Q7Z3S7 1137 aa16.99■□□□□ 0.31
CSNK1D-223ENST00000584472 TMC6Q7Z403 805 aa16.99■□□□□ 0.31
CSNK1D-223ENST00000584472 ELMOD1Q8N336 334 aa16.99■□□□□ 0.31
CSNK1D-223ENST00000584472 OR6B3Q8NGW1 331 aa16.99■□□□□ 0.31
CSNK1D-223ENST00000584472 SHC3Q92529 594 aa16.99■□□□□ 0.31
CSNK1D-223ENST00000584472 ACSF2Q96CM8 615 aaPredicted RBP16.99■□□□□ 0.31
CSNK1D-223ENST00000584472 IQCDQ96DY2 449 aa16.99■□□□□ 0.31
CSNK1D-223ENST00000584472 ASIC4Q96FT7 647 aa16.99■□□□□ 0.31
CSNK1D-223ENST00000584472 SYT15Q9BQS2 421 aa16.99■□□□□ 0.31
CSNK1D-223ENST00000584472 EDEM3Q9BZQ6 932 aa16.99■□□□□ 0.31
CSNK1D-223ENST00000584472 CRISPLD1Q9H336 500 aa16.99■□□□□ 0.31
CSNK1D-223ENST00000584472 AVENQ9NQS1 362 aaPredicted RBP16.99■□□□□ 0.31
CSNK1D-223ENST00000584472 PCDHB5Q9Y5E4 795 aa16.99■□□□□ 0.31
CSNK1D-223ENST00000584472 A0A1W2PQJ5 194 aa16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 GYPCP04921 128 aa16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 ACAT1P24752 427 aaKnown RBP16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 LMO2P25791 158 aa16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 GNL1P36915 607 aaPredicted RBP16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 ALDH1A3P47895 512 aa16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 NDST1P52848 882 aa16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 EPHB3P54753 998 aa16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 JAM2P57087 298 aa16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 TWF1Q12792 350 aa16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 PABPC1LQ4VXU2 614 aaKnown RBP16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 SMYD5Q6GMV2 418 aa16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 FAM171BQ6P995 826 aa16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 GRASPQ7Z6J2 395 aaPredicted RBP16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 UNC93AQ86WB7 457 aa16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 FBXL6Q8N531 539 aa16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 WHAMMQ8TF30 809 aa16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 BAP1Q92560 729 aa16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 FUBP3Q96I24 572 aaKnown RBP eCLIP16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.98■□□□□ 0.317e-8■■■■■ 49.6
CSNK1D-223ENST00000584472 HMGXB4Q9UGU5 601 aa16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 CNTN6Q9UQ52 1028 aa16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 ASB3Q9Y575 518 aa16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 PCDHB4Q9Y5E5 795 aa16.98■□□□□ 0.31
CSNK1D-223ENST00000584472 DOCK6Q96HP0 2047 aa16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 DOCK8Q8NF50 2099 aa16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 A8MXQ7 604 aa16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 F8VZ95 297 aa16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 RNF225M0QZC1 329 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 FOXN3O00409 490 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 HCRTO43612 131 aa16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 PTPN2P17706 415 aa16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 FSHRP23945 695 aa16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 TBX2Q13207 712 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 TRIM14Q14142 442 aa16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 CFAP221Q4G0U5 840 aa16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 TMEM270Q6UE05 265 aa16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 C4orf50Q6ZRC1 276 aa16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 TTC9BQ8N6N2 239 aa16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 LEMD2Q8NC56 503 aa16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 PBXIP1Q96AQ6 731 aa16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 ZNF512Q96ME7 567 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 SPAG5Q96R06 1193 aa16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 TWNKQ96RR1 684 aa16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 TMLHEQ9NVH6 421 aa16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 ABI2Q9NYB9 513 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 DNMT3BQ9UBC3 853 aaKnown RBP16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 GTF3C4Q9UKN8 822 aa16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 CAPN11Q9UMQ6 739 aa16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 SLC27A5Q9Y2P5 690 aa16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 ZFP37Q9Y6Q3 630 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 NOTCH4Q99466 2003 aa16.97■□□□□ 0.31
CSNK1D-223ENST00000584472 ZDBF2Q9HCK1 2354 aa16.96■□□□□ 0.31
CSNK1D-223ENST00000584472 PDGFRBP09619 1106 aa16.96■□□□□ 0.31
CSNK1D-223ENST00000584472 PNMA6AP0CW24 399 aaPredicted RBP16.96■□□□□ 0.31
CSNK1D-223ENST00000584472 HAPLN1P10915 354 aaPredicted RBP16.96■□□□□ 0.31
CSNK1D-223ENST00000584472 KRT5P13647 590 aa16.96■□□□□ 0.31
CSNK1D-223ENST00000584472 HOXD11P31277 338 aaPredicted RBP16.96■□□□□ 0.31
CSNK1D-223ENST00000584472 CASP14P31944 242 aa16.96■□□□□ 0.31
CSNK1D-223ENST00000584472 ZNF132P52740 706 aa16.96■□□□□ 0.31
CSNK1D-223ENST00000584472 RAD23BP54727 409 aa16.96■□□□□ 0.31
CSNK1D-223ENST00000584472 EPHA5P54756 1037 aa16.96■□□□□ 0.31
CSNK1D-223ENST00000584472 ZNF394Q53GI3 561 aa16.96■□□□□ 0.31
CSNK1D-223ENST00000584472 SUGP1Q8IWZ8 645 aaKnown RBP16.96■□□□□ 0.31
CSNK1D-223ENST00000584472 FAM71AQ8IYT1 594 aa16.96■□□□□ 0.31
CSNK1D-223ENST00000584472 MYCBPAPQ8TBZ2 947 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms