RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 PJA1Q8NG27 643 aa21.77■■□□□ 1.08
SS18-224ENST00000584083 TRMT2BQ96GJ1 504 aaKnown RBP21.77■■□□□ 1.08
SS18-224ENST00000584083 IMPG2Q9BZV3 1241 aa21.77■■□□□ 1.08
SS18-224ENST00000584083 SDCBP2Q9H190 292 aa21.77■■□□□ 1.08
SS18-224ENST00000584083 MYH10P35580 1976 aa21.77■■□□□ 1.08
SS18-224ENST00000584083 TRIM66O15016 1216 aa21.76■■□□□ 1.07
SS18-224ENST00000584083 PRAMEF12O95522 483 aa21.76■■□□□ 1.07
SS18-224ENST00000584083 ASS1P00966 412 aaKnown RBP21.76■■□□□ 1.07
SS18-224ENST00000584083 DDX6P26196 483 aaKnown RBP eCLIP21.76■■□□□ 1.07
SS18-224ENST00000584083 ANKRD40Q6AI12 368 aa21.76■■□□□ 1.07
SS18-224ENST00000584083 SPOPLQ6IQ16 392 aa21.76■■□□□ 1.07
SS18-224ENST00000584083 CMTM8Q8IZV2 173 aa21.76■■□□□ 1.07
SS18-224ENST00000584083 ATOH1Q92858 354 aaPredicted RBP21.76■■□□□ 1.07
SS18-224ENST00000584083 TNIP3Q96KP6 325 aa21.76■■□□□ 1.07
SS18-224ENST00000584083 SPATA17Q96L03 361 aa21.76■■□□□ 1.07
SS18-224ENST00000584083 MYRFLQ96LU7 910 aa21.76■■□□□ 1.07
SS18-224ENST00000584083 SMG9Q9H0W8 520 aaKnown RBP21.76■■□□□ 1.07
SS18-224ENST00000584083 MAN1B1Q9UKM7 699 aa21.76■■□□□ 1.07
SS18-224ENST00000584083 ANAPC1Q9H1A4 1944 aa21.75■■□□□ 1.07
SS18-224ENST00000584083 FAM170BA6NMN3 283 aa21.75■■□□□ 1.07
SS18-224ENST00000584083 CLDN5O00501 218 aa21.75■■□□□ 1.07
SS18-224ENST00000584083 WEE1P30291 646 aa21.75■■□□□ 1.07
SS18-224ENST00000584083 AVPR1AP37288 418 aa21.75■■□□□ 1.07
SS18-224ENST00000584083 FKBP3Q00688 224 aaKnown RBP21.75■■□□□ 1.07
SS18-224ENST00000584083 TXNDC8Q6A555 127 aa21.75■■□□□ 1.07
SS18-224ENST00000584083 ZNF852Q6ZMS4 543 aa21.75■■□□□ 1.07
SS18-224ENST00000584083 MON1AQ86VX9 555 aa21.75■■□□□ 1.07
SS18-224ENST00000584083 ADSSL1Q8N142 457 aa21.75■■□□□ 1.07
SS18-224ENST00000584083 CCDC150Q8NCX0 1101 aa21.75■■□□□ 1.07
SS18-224ENST00000584083 CSGALNACT1Q8TDX6 532 aa21.75■■□□□ 1.07
SS18-224ENST00000584083 TAS1R2Q8TE23 839 aa21.75■■□□□ 1.07
SS18-224ENST00000584083 MED10Q9BTT4 135 aa21.75■■□□□ 1.07
SS18-224ENST00000584083 DDX23Q9BUQ8 820 aaKnown RBP21.75■■□□□ 1.07
SS18-224ENST00000584083 B3GNT5Q9BYG0 378 aa21.75■■□□□ 1.07
SS18-224ENST00000584083 ZNF518BQ9C0D4 1074 aa21.75■■□□□ 1.07
SS18-224ENST00000584083 ELOVL4Q9GZR5 314 aa21.75■■□□□ 1.07
SS18-224ENST00000584083 TMEM8AQ9HCN3 771 aa21.75■■□□□ 1.07
SS18-224ENST00000584083 TRPV5Q9NQA5 729 aa21.75■■□□□ 1.07
SS18-224ENST00000584083 OBP2AQ9NY56 170 aa21.75■■□□□ 1.07
SS18-224ENST00000584083 F8VP50 259 aa21.74■■□□□ 1.07
SS18-224ENST00000584083 PSMA7O14818 248 aa21.74■■□□□ 1.07
SS18-224ENST00000584083 CHADO15335 359 aa21.74■■□□□ 1.07
SS18-224ENST00000584083 STX10O60499 249 aa21.74■■□□□ 1.07
SS18-224ENST00000584083 LRRN2O75325 713 aa21.74■■□□□ 1.07
SS18-224ENST00000584083 GTF2H1P32780 548 aa21.74■■□□□ 1.07
SS18-224ENST00000584083 FCHO2Q0JRZ9 810 aa21.74■■□□□ 1.07
SS18-224ENST00000584083 DENND5BQ6ZUT9 1274 aa21.74■■□□□ 1.07
SS18-224ENST00000584083 ACOT1Q86TX2 421 aa21.74■■□□□ 1.07
SS18-224ENST00000584083 CELF5Q8N6W0 485 aaKnown RBP21.74■■□□□ 1.07
SS18-224ENST00000584083 BPIFB1Q8TDL5 484 aa21.74■■□□□ 1.07
SS18-224ENST00000584083 CEP295NLQ96MC4 621 aa21.74■■□□□ 1.07
SS18-224ENST00000584083 LRRC3BQ96PB8 259 aa21.74■■□□□ 1.07
SS18-224ENST00000584083 NELL2Q99435 816 aa21.74■■□□□ 1.07
SS18-224ENST00000584083 TRPC7Q9HCX4 862 aa21.74■■□□□ 1.07
SS18-224ENST00000584083 LTB4R2Q9NPC1 389 aa21.74■■□□□ 1.07
SS18-224ENST00000584083 FAM86C1Q9NVL1 165 aa21.74■■□□□ 1.07
SS18-224ENST00000584083 EHD2Q9NZN4 543 aa21.74■■□□□ 1.07
SS18-224ENST00000584083 MRPS17Q9Y2R5 130 aaKnown RBP21.74■■□□□ 1.07
SS18-224ENST00000584083 MTF2Q9Y483 593 aaPredicted RBP21.74■■□□□ 1.07
SS18-224ENST00000584083 ATP8B3O60423 1300 aa21.74■■□□□ 1.07
SS18-224ENST00000584083 TRIM49BA6NDI0 452 aa21.73■■□□□ 1.07
SS18-224ENST00000584083 SOBPA7XYQ1 873 aa21.73■■□□□ 1.07
SS18-224ENST00000584083 PMS1P54277 932 aaKnown RBP21.73■■□□□ 1.07
SS18-224ENST00000584083 NOP14P78316 857 aaKnown RBP21.73■■□□□ 1.07
SS18-224ENST00000584083 LRRC63Q05C16 580 aa21.73■■□□□ 1.07
SS18-224ENST00000584083 ARHGAP29Q52LW3 1261 aa21.73■■□□□ 1.07
SS18-224ENST00000584083 TCERG1LQ5VWI1 586 aa21.73■■□□□ 1.07
SS18-224ENST00000584083 KRT39Q6A163 491 aa21.73■■□□□ 1.07
SS18-224ENST00000584083 DHTKD1Q96HY7 919 aaPredicted RBP21.73■■□□□ 1.07
SS18-224ENST00000584083 ZFYVE19Q96K21 471 aa21.73■■□□□ 1.07
SS18-224ENST00000584083 C8orf48Q96LL4 319 aa21.73■■□□□ 1.07
SS18-224ENST00000584083 THG1LQ9NWX6 298 aaKnown RBP21.73■■□□□ 1.07
SS18-224ENST00000584083 PIAS3Q9Y6X2 628 aa21.73■■□□□ 1.07
SS18-224ENST00000584083 COL4A2P08572 1712 aa21.72■■□□□ 1.07
SS18-224ENST00000584083 CACNA1HO95180 2353 aa21.72■■□□□ 1.07
SS18-224ENST00000584083 BIN1O00499 593 aa21.72■■□□□ 1.07
SS18-224ENST00000584083 MAN2B1O00754 1011 aa21.72■■□□□ 1.07
SS18-224ENST00000584083 TADA3O75528 432 aa21.72■■□□□ 1.07
SS18-224ENST00000584083 CCNE1P24864 410 aa21.72■■□□□ 1.07
SS18-224ENST00000584083 PPP1R2P41236 205 aa21.72■■□□□ 1.07
SS18-224ENST00000584083 ASPAP45381 313 aa21.72■■□□□ 1.07
SS18-224ENST00000584083 MXI1P50539 228 aa21.72■■□□□ 1.07
SS18-224ENST00000584083 KPNA1P52294 538 aaPredicted RBP21.72■■□□□ 1.07
SS18-224ENST00000584083 NDST1P52848 882 aa21.72■■□□□ 1.07
SS18-224ENST00000584083 CACNA2D1P54289 1103 aa21.72■■□□□ 1.07
SS18-224ENST00000584083 UBE2HP62256 183 aa21.72■■□□□ 1.07
SS18-224ENST00000584083 ORC1Q13415 861 aa21.72■■□□□ 1.07
SS18-224ENST00000584083 DCAF17Q5H9S7 520 aaPredicted RBP21.72■■□□□ 1.07
SS18-224ENST00000584083 KLHL10Q6JEL2 608 aa21.72■■□□□ 1.07
SS18-224ENST00000584083 BCO2Q9BYV7 579 aa21.72■■□□□ 1.07
SS18-224ENST00000584083 OSBPL6Q9BZF3 934 aa21.72■■□□□ 1.07
SS18-224ENST00000584083 TDP1Q9NUW8 608 aa21.72■■□□□ 1.07
SS18-224ENST00000584083 NDRG2Q9UN36 371 aaKnown RBP21.72■■□□□ 1.07
SS18-224ENST00000584083 KIF26AQ9ULI4 1882 aaPredicted RBP21.72■■□□□ 1.07
SS18-224ENST00000584083 F5P12259 2224 aa21.72■■□□□ 1.07
SS18-224ENST00000584083 TRAV19A0A0A6YYK7 116 aa21.71■■□□□ 1.07
SS18-224ENST00000584083 ARNTLO00327 626 aa21.71■■□□□ 1.07
SS18-224ENST00000584083 NCAM2O15394 837 aa21.71■■□□□ 1.07
SS18-224ENST00000584083 SLC16A3O15427 465 aaKnown RBP21.71■■□□□ 1.07
SS18-224ENST00000584083 TRIM21P19474 475 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms