RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 AGAP11Q8TF27 550 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 RSAD2Q8WXG1 361 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 FAM167BQ9BTA0 163 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SEPT9Q9UHD8 586 aaPredicted RBP12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 PCDHA3Q9Y5H8 950 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 PCDHA10Q9Y5I2 948 aa12.18□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SYNGAP1Q96PV0 1343 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 GSTTP1A0A1W2PQM5 241 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 FAM187AA6NFU0 413 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 NUDT17P0C025 328 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 EZRP15311 586 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ADCY8P40145 1251 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 STT3AP46977 705 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ALDH5A1P51649 535 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ITGA8P53708 1063 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 OAZ1P54368 228 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 GTF2BQ00403 316 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 DHX34Q14147 1143 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 C6orf118Q5T5N4 469 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CATSPER4Q7RTX7 472 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 BPHLQ86WA6 291 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 OR8H2Q8N162 312 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 MIPOL1Q8TD10 442 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 FAM213AQ9BRX8 229 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 FAM126AQ9BYI3 521 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 DNAAF2Q9NVR5 837 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 TBX20Q9UMR3 447 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 A0A0G2JLL6 359 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SPDYE5A6NIY4 337 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 A6NJY4 79 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 THAP12O43422 761 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SNX2O60749 519 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 MYBL1P10243 752 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CYP11B1P15538 503 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CD58P19256 250 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 XRCC4Q13426 336 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 LAPTM5Q13571 262 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ATP13A4Q4VNC1 1196 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SH3D19Q5HYK7 790 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 PRRT2Q7Z6L0 340 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 RHOT2Q8IXI1 618 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 EIF1ADQ8N9N8 165 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 NSMCE1Q8WV22 266 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ZBTB45Q96K62 511 aaPredicted RBP12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 VCX3BQ9H321 246 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 C10orf88Q9H8K7 445 aa12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.17□□□□□ -0.46
CDK5RAP3-231ENST00000584063 UBE4BO95155 1302 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 PTPRJQ12913 1337 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 TP73O15350 636 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 KDM1AO60341 852 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 GRIN3BO60391 1043 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 AGR2O95994 175 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 KRT16P08779 473 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ZSCAN5DPP0CG00 497 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 BRAFP15056 766 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ATF7P17544 494 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 MARK3P27448 753 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 GJA5P36382 358 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 PSMC5P62195 406 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 LY6KQ17RY6 165 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 MTERF2Q49AM1 385 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 PIGWQ7Z7B1 504 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CCDC60Q8IWA6 550 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 FAM71AQ8IYT1 594 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ZNF516Q92618 1163 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 E2F7Q96AV8 911 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 PGM2Q96G03 612 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 L3MBTL3Q96JM7 780 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 C12orf65Q9H3J6 166 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 KRT82Q9NSB4 513 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 RBPJLQ9UBG7 517 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SLC9A2Q9UBY0 812 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ARPC4-TTLL3A0A0A6YYG9 625 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SNX3O60493 162 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 RTN2O75298 545 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 BANF1O75531 89 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CELF2O95319 508 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ETS1P14921 441 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 CTNNA2P26232 953 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ACOT2P49753 483 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ERFP50548 548 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ARPC4P59998 168 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 ACTR2P61160 394 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 KRT76Q01546 638 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SIX1Q15475 284 aaPredicted RBP12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 VSTM1Q6UX27 236 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SV2AQ7L0J3 742 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 FITM2Q8N6M3 262 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 GLIS1Q8NBF1 620 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 KCT2Q8NC54 265 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 SKA1Q96BD8 255 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 KLHL29Q96CT2 875 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 RBM18Q96H35 190 aaKnown RBP12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 TMEM237Q96Q45 408 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 TMEM206Q9H813 350 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 MTUS1Q9ULD2 1270 aa12.16□□□□□ -0.46
CDK5RAP3-231ENST00000584063 PASKQ96RG2 1323 aa12.15□□□□□ -0.46
CDK5RAP3-231ENST00000584063 POC1B-GALNT4F8VUJ3 575 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms