RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 CYP11B1P15538 503 aa11.61□□□□□ -0.55
TOP3A-216ENST00000583804 BDNFP23560 247 aa11.61□□□□□ -0.55
TOP3A-216ENST00000583804 CYP2F1P24903 491 aa11.61□□□□□ -0.55
TOP3A-216ENST00000583804 PDE6CP51160 858 aa11.61□□□□□ -0.55
TOP3A-216ENST00000583804 CLCN4P51793 760 aa11.61□□□□□ -0.55
TOP3A-216ENST00000583804 GFPT1Q06210 699 aaPredicted RBP11.61□□□□□ -0.55
TOP3A-216ENST00000583804 MEA1Q16626 185 aa11.61□□□□□ -0.55
TOP3A-216ENST00000583804 PPP1R26Q5T8A7 1209 aaPredicted RBP11.61□□□□□ -0.55
TOP3A-216ENST00000583804 NOP9Q86U38 636 aaKnown RBP11.61□□□□□ -0.55
TOP3A-216ENST00000583804 FMNL3Q8IVF7 1028 aa11.61□□□□□ -0.55
TOP3A-216ENST00000583804 FUKQ8N0W3 1084 aa11.61□□□□□ -0.55
TOP3A-216ENST00000583804 KREMEN2Q8NCW0 462 aa11.61□□□□□ -0.55
TOP3A-216ENST00000583804 KIAA1524Q8TCG1 905 aa11.61□□□□□ -0.55
TOP3A-216ENST00000583804 SPPL2BQ8TCT7 592 aa11.61□□□□□ -0.55
TOP3A-216ENST00000583804 C2orf15Q8WU43 125 aaKnown RBP11.61□□□□□ -0.55
TOP3A-216ENST00000583804 ZNF606Q8WXB4 792 aa11.61□□□□□ -0.55
TOP3A-216ENST00000583804 MYLIPQ8WY64 445 aa11.61□□□□□ -0.55
TOP3A-216ENST00000583804 CDX2Q99626 313 aaPredicted RBP11.61□□□□□ -0.55
TOP3A-216ENST00000583804 SEPT5Q99719 369 aaPredicted RBP11.61□□□□□ -0.55
TOP3A-216ENST00000583804 RHOBTB2Q9BYZ6 727 aa11.61□□□□□ -0.55
TOP3A-216ENST00000583804 ZNF518BQ9C0D4 1074 aa11.61□□□□□ -0.55
TOP3A-216ENST00000583804 AIPL1Q9NZN9 384 aa11.61□□□□□ -0.55
TOP3A-216ENST00000583804 HESX1Q9UBX0 185 aa11.61□□□□□ -0.55
TOP3A-216ENST00000583804 MYO7AQ13402 2215 aa11.61□□□□□ -0.55
TOP3A-216ENST00000583804 ATP8B3O60423 1300 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 SPDYE4A6NLX3 237 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 USP27XA6NNY8 438 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 MED7O43513 233 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 AKR1B10O60218 316 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 AP1G2O75843 785 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 SEC24AO95486 1093 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 VNN2O95498 520 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 MMEP08473 750 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 CFHP08603 1231 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 FAM200BP0CF97 657 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 EPCAMP16422 314 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 POU3F3P20264 500 aaPredicted RBP11.6□□□□□ -0.55
TOP3A-216ENST00000583804 GTF2F1P35269 517 aaKnown RBP eCLIP11.6□□□□□ -0.55
TOP3A-216ENST00000583804 GRIK1P39086 918 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 KIF11P52732 1056 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 HYAL1Q12794 435 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 CNGA2Q16280 664 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 GOLGA7BQ2TAP0 167 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 MGAT5BQ3V5L5 792 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 LIN9Q5TKA1 542 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 ARHGAP17Q68EM7 881 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 SMYD5Q6GMV2 418 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 LILRA6Q6PI73 481 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 PAQR9Q6ZVX9 377 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 TMTC1Q8IUR5 882 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 SCN4BQ8IWT1 228 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 UBA3Q8TBC4 463 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 SLC22A17Q8WUG5 538 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 CCDC42Q96M95 316 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 CDCA3Q99618 268 aaPredicted RBP11.6□□□□□ -0.55
TOP3A-216ENST00000583804 HNRNPABQ99729 332 aaKnown RBP11.6□□□□□ -0.55
TOP3A-216ENST00000583804 ZSWIM1Q9BR11 485 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 TSPAN16Q9UKR8 245 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 HCFC2Q9Y5Z7 792 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 CHD7Q9P2D1 2997 aa11.6□□□□□ -0.55
TOP3A-216ENST00000583804 O00370 1275 aa11.59□□□□□ -0.55
TOP3A-216ENST00000583804 ARHGAP6O43182 974 aa11.59□□□□□ -0.55
TOP3A-216ENST00000583804 SOAT2O75908 522 aa11.59□□□□□ -0.55
TOP3A-216ENST00000583804 MICAL2O94851 1124 aa11.59□□□□□ -0.55
TOP3A-216ENST00000583804 HAPLN1P10915 354 aaPredicted RBP11.59□□□□□ -0.55
TOP3A-216ENST00000583804 FOSL2P15408 326 aa11.59□□□□□ -0.55
TOP3A-216ENST00000583804 HNRNPH3P31942 346 aaKnown RBP11.59□□□□□ -0.55
TOP3A-216ENST00000583804 TUFMP49411 452 aaKnown RBP11.59□□□□□ -0.55
TOP3A-216ENST00000583804 RBM10P98175 930 aaKnown RBP11.59□□□□□ -0.55
TOP3A-216ENST00000583804 STILQ15468 1287 aa11.59□□□□□ -0.55
TOP3A-216ENST00000583804 CFAP221Q4G0U5 840 aa11.59□□□□□ -0.55
TOP3A-216ENST00000583804 LCLAT1Q6UWP7 414 aa11.59□□□□□ -0.55
TOP3A-216ENST00000583804 EP400NLQ6ZTU2 488 aa11.59□□□□□ -0.55
TOP3A-216ENST00000583804 CCDC149Q6ZUS6 474 aa11.59□□□□□ -0.55
TOP3A-216ENST00000583804 FAM35AQ86V20 835 aa11.59□□□□□ -0.55
TOP3A-216ENST00000583804 TTC9BQ8N6N2 239 aa11.59□□□□□ -0.55
TOP3A-216ENST00000583804 SLC7A14Q8TBB6 771 aa11.59□□□□□ -0.55
TOP3A-216ENST00000583804 EPS8L1Q8TE68 723 aa11.59□□□□□ -0.55
TOP3A-216ENST00000583804 SYN2Q92777 582 aaPredicted RBP11.59□□□□□ -0.55
TOP3A-216ENST00000583804 SMARCD1Q96GM5 515 aa11.59□□□□□ -0.55
TOP3A-216ENST00000583804 FUBP3Q96I24 572 aaKnown RBP eCLIP11.59□□□□□ -0.55
TOP3A-216ENST00000583804 AGPAT1Q99943 283 aa11.59□□□□□ -0.55
TOP3A-216ENST00000583804 CRISPLD1Q9H336 500 aa11.59□□□□□ -0.55
TOP3A-216ENST00000583804 ABCB6Q9NP58 842 aa11.59□□□□□ -0.55
TOP3A-216ENST00000583804 MAN1C1Q9NR34 630 aa11.59□□□□□ -0.55
TOP3A-216ENST00000583804 KRT82Q9NSB4 513 aa11.59□□□□□ -0.55
TOP3A-216ENST00000583804 DPP7Q9UHL4 492 aa11.59□□□□□ -0.55
TOP3A-216ENST00000583804 FBXW11Q9UKB1 542 aa11.59□□□□□ -0.55
TOP3A-216ENST00000583804 MAFFQ9ULX9 164 aa11.59□□□□□ -0.55
TOP3A-216ENST00000583804 A0A087X0T9 212 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 M0QYV0 167 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 DDX3XO00571 662 aaKnown RBP eCLIP11.58□□□□□ -0.56
TOP3A-216ENST00000583804 NDUFA10O95299 355 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 C1RP00736 705 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 C8AP07357 584 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 FAM228BP0C875 321 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 CHRNB2P17787 502 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 TNFAIP3P21580 790 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 FECHP22830 423 aa11.58□□□□□ -0.56
TOP3A-216ENST00000583804 CYLC1P35663 651 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms