RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 TSPAN16Q9UKR8 245 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 MTUS1Q9ULD2 1270 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 NENFQ9UMX5 172 aa17.33■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CLDN5O00501 218 aa17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 GRM6O15303 877 aa17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 ADAM12O43184 909 aa17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 NDUFA10O95299 355 aa17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 GZMAP12544 262 aa17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 UNGP13051 313 aaPredicted RBP17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CDH5P33151 784 aaPredicted RBP17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 GPM6BQ13491 265 aa17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 PTPN14Q15678 1187 aa17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CLEC16AQ2KHT3 1053 aa17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 GOLGA7BQ2TAP0 167 aa17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 SLC39A12Q504Y0 691 aa17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 TMC7Q7Z402 723 aa17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 PALB2Q86YC2 1186 aa17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 UBA3Q8TBC4 463 aa17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 AUTS2Q8WXX7 1259 aa17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 MYLPFQ96A32 169 aa17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 SPTLC3Q9NUV7 552 aa17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 SEPT11Q9NVA2 429 aaKnown RBP17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 FNIP2Q9P278 1114 aa17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 NAGPAQ9UK23 515 aa17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CDY1Q9Y6F8 540 aa17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 NLRC5Q86WI3 1866 aa17.32■□□□□ 0.36
CDK5RAP3-228ENST00000583363 FSCN2O14926 492 aa17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 ZNF263O14978 683 aa17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 RPL17P18621 184 aaKnown RBP17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 ADORA2BP29275 332 aa17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 OR1D2P34982 312 aa17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 GPD2P43304 727 aa17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 ARPP19P56211 112 aa17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CYP27A1Q02318 531 aa17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 SMARCB1Q12824 385 aa17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CAMK1Q14012 370 aa17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 NFE2Q16621 373 aaPredicted RBP17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CCDC122Q5T0U0 273 aa17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 ACAD10Q6JQN1 1059 aa17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 ALKBH5Q6P6C2 394 aaKnown RBP17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 C4orf50Q6ZRC1 276 aa17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 TTC30AQ86WT1 665 aa17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 TMEM35BQ8NCS4 154 aa17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 GDPD5Q8WTR4 605 aa17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 KHSRPQ92945 711 aaKnown RBP eCLIP17.31■□□□□ 0.361e-7■□□□□ 9.1
CDK5RAP3-228ENST00000583363 LRFN3Q9BTN0 628 aa17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 MED10Q9BTT4 135 aa17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 DUSP16Q9BY84 665 aa17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 ZNF518BQ9C0D4 1074 aa17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 TAS2R14Q9NYV8 317 aa17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 HESX1Q9UBX0 185 aa17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 IRAK3Q9Y616 596 aa17.31■□□□□ 0.36
CDK5RAP3-228ENST00000583363 M0QYV0 167 aa17.3■□□□□ 0.36
CDK5RAP3-228ENST00000583363 RTN2O75298 545 aa17.3■□□□□ 0.36
CDK5RAP3-228ENST00000583363 LSM8O95777 96 aaKnown RBP17.3■□□□□ 0.36
CDK5RAP3-228ENST00000583363 NOMO3P69849 1222 aa17.3■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CREMQ03060 361 aa17.3■□□□□ 0.36
CDK5RAP3-228ENST00000583363 RAB33AQ14088 237 aa17.3■□□□□ 0.36
CDK5RAP3-228ENST00000583363 SPA17Q15506 151 aa17.3■□□□□ 0.36
CDK5RAP3-228ENST00000583363 TOGARAM2Q6ZUX3 1019 aa17.3■□□□□ 0.36
CDK5RAP3-228ENST00000583363 SPATA2LQ8IUW3 424 aaPredicted RBP17.3■□□□□ 0.36
CDK5RAP3-228ENST00000583363 PASD1Q8IV76 773 aa17.3■□□□□ 0.36
CDK5RAP3-228ENST00000583363 MRPL43Q8N983 215 aaKnown RBP17.3■□□□□ 0.36
CDK5RAP3-228ENST00000583363 SLC35F5Q8WV83 523 aa17.3■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CPA5Q8WXQ8 436 aa17.3■□□□□ 0.36
CDK5RAP3-228ENST00000583363 TRIM44Q96DX7 344 aaPredicted RBP17.3■□□□□ 0.36
CDK5RAP3-228ENST00000583363 TCF25Q9BQ70 676 aa17.3■□□□□ 0.36
CDK5RAP3-228ENST00000583363 ISCUQ9H1K1 167 aa17.3■□□□□ 0.36
CDK5RAP3-228ENST00000583363 NGRNQ9NPE2 291 aaKnown RBP17.3■□□□□ 0.36
CDK5RAP3-228ENST00000583363 TLR9Q9NR96 1032 aa17.3■□□□□ 0.36
CDK5RAP3-228ENST00000583363 REXO2Q9Y3B8 237 aaKnown RBP17.3■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CEP83Q9Y592 693 aa17.3■□□□□ 0.36
CDK5RAP3-228ENST00000583363 PLXNA4Q9HCM2 1894 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 TMCO5BA8MYB1 307 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 TEX28O15482 410 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 ABLIM3O94929 683 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 VNN2O95498 520 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 FTLP02792 175 aaPredicted RBP17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 SETSIPP0DME0 302 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CPB1P15086 417 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 BDNFP23560 247 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 MAGEA1P43355 309 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CDR1P51861 262 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 ROR1Q01973 937 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CENPCQ03188 943 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 PDE4CQ08493 712 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 SMC1AQ14683 1233 aaKnown RBP17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 CFAP221Q4G0U5 840 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 C10orf76Q5T2E6 689 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 NAA35Q5VZE5 725 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 PDE12Q6L8Q7 609 aaKnown RBP17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 RNF19BQ6ZMZ0 732 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 FAM35AQ86V20 835 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 ZNF461Q8TAF7 563 aa17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 C2orf15Q8WU43 125 aaKnown RBP17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 SECISBP2LQ93073 1101 aaKnown RBP17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 FUBP3Q96I24 572 aaKnown RBP eCLIP17.29■□□□□ 0.36
CDK5RAP3-228ENST00000583363 KLHL5Q96PQ7 755 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms