RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 OPRD1P41143 372 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 P2RY2P41231 377 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 DPP6P42658 865 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 PTGER3P43115 390 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 MYL7Q01449 175 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 BYSLQ13895 437 aaKnown RBP13.21□□□□□ -0.29
TOP3A-215ENST00000583328 DHX8Q14562 1220 aaKnown RBP13.21□□□□□ -0.29
TOP3A-215ENST00000583328 ZC2HC1CQ53FD0 456 aaPredicted RBP13.21□□□□□ -0.29
TOP3A-215ENST00000583328 LMBRD2Q68DH5 695 aaPredicted RBP13.21□□□□□ -0.29
TOP3A-215ENST00000583328 SLFN12LQ6IEE8 588 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 TMEM92Q6UXU6 159 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 PIP4P1Q86T03 277 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 GPBP1Q86WP2 473 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 SCN4BQ8IWT1 228 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 PGBD3Q8N328 593 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 CHCHD4Q8N4Q1 142 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 WHAMMQ8TF30 809 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 LRRC15Q8TF66 581 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 LEO1Q8WVC0 666 aaPredicted RBP13.21□□□□□ -0.29
TOP3A-215ENST00000583328 TMX3Q96JJ7 454 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 ACBD6Q9BR61 282 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 PARVGQ9HBI0 331 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 ABCB6Q9NP58 842 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 POLMQ9NP87 494 aaPredicted RBP13.21□□□□□ -0.29
TOP3A-215ENST00000583328 TMEM74BQ9NUR3 256 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 DDX43Q9NXZ2 648 aaKnown RBP13.21□□□□□ -0.29
TOP3A-215ENST00000583328 GCNT4Q9P109 453 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 GTF3C4Q9UKN8 822 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 AGO2Q9UKV8 859 aaKnown RBP13.21□□□□□ -0.29
TOP3A-215ENST00000583328 EML5Q05BV3 1969 aa13.21□□□□□ -0.29
TOP3A-215ENST00000583328 VWA3AA6NCI4 1184 aa13.2□□□□□ -0.3
TOP3A-215ENST00000583328 C2orf78A6NCI8 922 aa13.2□□□□□ -0.3
TOP3A-215ENST00000583328 UPK3BL1B0FP48 263 aa13.2□□□□□ -0.3
TOP3A-215ENST00000583328 UPK3BL2E5RIL1 263 aa13.2□□□□□ -0.3
TOP3A-215ENST00000583328 TAF4O00268 1085 aa13.2□□□□□ -0.3
TOP3A-215ENST00000583328 HUS1O60921 280 aa13.2□□□□□ -0.3
TOP3A-215ENST00000583328 KLF8O95600 359 aaPredicted RBP13.2□□□□□ -0.3
TOP3A-215ENST00000583328 CFIP05156 583 aa13.2□□□□□ -0.3
TOP3A-215ENST00000583328 KRT18P05783 430 aaKnown RBP13.2□□□□□ -0.3
TOP3A-215ENST00000583328 HNRNPLP14866 589 aaKnown RBP eCLIP13.2□□□□□ -0.3
TOP3A-215ENST00000583328 TCF3P15923 654 aa13.2□□□□□ -0.3
TOP3A-215ENST00000583328 ACAT1P24752 427 aaKnown RBP13.2□□□□□ -0.3
TOP3A-215ENST00000583328 TIE1P35590 1138 aa13.2□□□□□ -0.3
TOP3A-215ENST00000583328 PNPLA4P41247 253 aa13.2□□□□□ -0.3
TOP3A-215ENST00000583328 SEMA3BQ13214 749 aa13.2□□□□□ -0.3
TOP3A-215ENST00000583328 TMEM119Q4V9L6 283 aa13.2□□□□□ -0.3
TOP3A-215ENST00000583328 INTS6LQ5JSJ4 861 aaKnown RBP13.2□□□□□ -0.3
TOP3A-215ENST00000583328 LYSMD4Q5XG99 296 aa13.2□□□□□ -0.3
TOP3A-215ENST00000583328 SLC23A3Q6PIS1 610 aa13.2□□□□□ -0.3
TOP3A-215ENST00000583328 SPATA2LQ8IUW3 424 aaPredicted RBP13.2□□□□□ -0.3
TOP3A-215ENST00000583328 PDCL2Q8N4E4 241 aa13.2□□□□□ -0.3
TOP3A-215ENST00000583328 ALLCQ8N6M5 410 aa13.2□□□□□ -0.3
TOP3A-215ENST00000583328 FRMD1Q8N878 549 aa13.2□□□□□ -0.3
TOP3A-215ENST00000583328 TXNDC5Q8NBS9 432 aaKnown RBP13.2□□□□□ -0.3
TOP3A-215ENST00000583328 SNX21Q969T3 373 aa13.2□□□□□ -0.3
TOP3A-215ENST00000583328 FNBP1Q96RU3 617 aa13.2□□□□□ -0.3
TOP3A-215ENST00000583328 GTPBP2Q9BX10 602 aaKnown RBP13.2□□□□□ -0.3
TOP3A-215ENST00000583328 MBD1Q9UIS9 605 aaPredicted RBP13.2□□□□□ -0.3
TOP3A-215ENST00000583328 ARHGAP26Q9UNA1 814 aa13.2□□□□□ -0.3
TOP3A-215ENST00000583328 PKD1L2Q7Z442 2459 aa13.2□□□□□ -0.3
TOP3A-215ENST00000583328 ASCC3Q8N3C0 2202 aaKnown RBP13.2□□□□□ -0.3
TOP3A-215ENST00000583328 CACNA1EQ15878 2313 aa13.19□□□□□ -0.3
TOP3A-215ENST00000583328 ATXN2Q99700 1313 aaKnown RBP13.19□□□□□ -0.3
TOP3A-215ENST00000583328 GON4LQ3T8J9 2241 aa13.19□□□□□ -0.3
TOP3A-215ENST00000583328 LEFTY2O00292 366 aa13.19□□□□□ -0.3
TOP3A-215ENST00000583328 OPHN1O60890 802 aa13.19□□□□□ -0.3
TOP3A-215ENST00000583328 APODP05090 189 aa13.19□□□□□ -0.3
TOP3A-215ENST00000583328 POLR2BP30876 1174 aaKnown RBP13.19□□□□□ -0.3
TOP3A-215ENST00000583328 ABCD1P33897 745 aa13.19□□□□□ -0.3
TOP3A-215ENST00000583328 SLC6A11P48066 632 aa13.19□□□□□ -0.3
TOP3A-215ENST00000583328 PDE6CP51160 858 aa13.19□□□□□ -0.3
TOP3A-215ENST00000583328 ZNF131P52739 623 aa13.19□□□□□ -0.3
TOP3A-215ENST00000583328 ATP2C1P98194 919 aaPredicted RBP13.19□□□□□ -0.3
TOP3A-215ENST00000583328 GTF2BQ00403 316 aa13.19□□□□□ -0.3
TOP3A-215ENST00000583328 POU5F1Q01860 360 aaKnown RBP13.19□□□□□ -0.3
TOP3A-215ENST00000583328 DUOXA1Q1HG43 343 aa13.19□□□□□ -0.3
TOP3A-215ENST00000583328 SPDYCQ5MJ68 293 aa13.19□□□□□ -0.3
TOP3A-215ENST00000583328 EOGTQ5NDL2 527 aa13.19□□□□□ -0.3
TOP3A-215ENST00000583328 NT5DC4Q86YG4 428 aa13.19□□□□□ -0.3
TOP3A-215ENST00000583328 CEP76Q8TAP6 659 aa13.19□□□□□ -0.3
TOP3A-215ENST00000583328 SPATA18Q8TC71 538 aa13.19□□□□□ -0.3
TOP3A-215ENST00000583328 HMGB4Q8WW32 186 aa13.19□□□□□ -0.3
TOP3A-215ENST00000583328 FSCN3Q9NQT6 498 aa13.19□□□□□ -0.3
TOP3A-215ENST00000583328 SLC6A14Q9UN76 642 aa13.19□□□□□ -0.3
TOP3A-215ENST00000583328 L1RE1Q9UN81 338 aa13.19□□□□□ -0.3
TOP3A-215ENST00000583328 AGAP1Q9UPQ3 857 aa13.19□□□□□ -0.3
TOP3A-215ENST00000583328 THADAQ6YHU6 1953 aa13.18□□□□□ -0.3
TOP3A-215ENST00000583328 PCNX2A6NKB5 2137 aa13.18□□□□□ -0.3
TOP3A-215ENST00000583328 TISP43B9A030 160 aa13.18□□□□□ -0.3
TOP3A-215ENST00000583328 SGK1O00141 431 aa13.18□□□□□ -0.3
TOP3A-215ENST00000583328 TBCAO75347 108 aaKnown RBP13.18□□□□□ -0.3
TOP3A-215ENST00000583328 IL18RAPO95256 599 aa13.18□□□□□ -0.3
TOP3A-215ENST00000583328 ITPKAP23677 461 aa13.18□□□□□ -0.3
TOP3A-215ENST00000583328 TFAMQ00059 246 aaKnown RBP13.18□□□□□ -0.3
TOP3A-215ENST00000583328 GFPT1Q06210 699 aaPredicted RBP13.18□□□□□ -0.3
TOP3A-215ENST00000583328 POSTNQ15063 836 aa13.18□□□□□ -0.3
TOP3A-215ENST00000583328 DHCR24Q15392 516 aa13.18□□□□□ -0.3
TOP3A-215ENST00000583328 GAB4Q2WGN9 574 aa13.18□□□□□ -0.3
TOP3A-215ENST00000583328 MAP7D1Q3KQU3 841 aa13.18□□□□□ -0.3
TOP3A-215ENST00000583328 HSF5Q4G112 596 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms