RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 CDY1Q9Y6F8 540 aa19.13■□□□□ 0.65
SNX11-212ENST00000583320 NCANO14594 1321 aa19.13■□□□□ 0.65
SNX11-212ENST00000583320 LAMA1P25391 3075 aa19.13■□□□□ 0.65
SNX11-212ENST00000583320 SDK1Q7Z5N4 2213 aa19.12■□□□□ 0.65
SNX11-212ENST00000583320 LRRIQ3A6PVS8 624 aaPredicted RBP19.12■□□□□ 0.65
SNX11-212ENST00000583320 FGFR3P22607 806 aa19.12■□□□□ 0.65
SNX11-212ENST00000583320 ACOT2P49753 483 aa19.12■□□□□ 0.65
SNX11-212ENST00000583320 AP3M2P53677 418 aa19.12■□□□□ 0.65
SNX11-212ENST00000583320 DLG4P78352 724 aa19.12■□□□□ 0.65
SNX11-212ENST00000583320 MYL7Q01449 175 aa19.12■□□□□ 0.65
SNX11-212ENST00000583320 COL9A2Q14055 689 aaPredicted RBP19.12■□□□□ 0.65
SNX11-212ENST00000583320 PRSS36Q5K4E3 855 aa19.12■□□□□ 0.65
SNX11-212ENST00000583320 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.12■□□□□ 0.65
SNX11-212ENST00000583320 FNBP1Q96RU3 617 aa19.12■□□□□ 0.65
SNX11-212ENST00000583320 MMRN2Q9H8L6 949 aa19.12■□□□□ 0.65
SNX11-212ENST00000583320 BRD9Q9H8M2 597 aa19.12■□□□□ 0.65
SNX11-212ENST00000583320 LUC7L2Q9Y383 392 aaKnown RBP19.12■□□□□ 0.65
SNX11-212ENST00000583320 COQ4Q9Y3A0 265 aa19.12■□□□□ 0.65
SNX11-212ENST00000583320 AKAP13Q12802 2813 aa19.12■□□□□ 0.65
SNX11-212ENST00000583320 MAN2B1O00754 1011 aa19.11■□□□□ 0.65
SNX11-212ENST00000583320 CLTAP09496 248 aa19.11■□□□□ 0.65
SNX11-212ENST00000583320 HOXB3P14651 431 aaPredicted RBP19.11■□□□□ 0.65
SNX11-212ENST00000583320 CASP14P31944 242 aa19.11■□□□□ 0.65
SNX11-212ENST00000583320 CCR2P41597 374 aa19.11■□□□□ 0.65
SNX11-212ENST00000583320 MXI1P50539 228 aa19.11■□□□□ 0.65
SNX11-212ENST00000583320 CCR3P51677 355 aa19.11■□□□□ 0.65
SNX11-212ENST00000583320 ZBED6P86452 979 aa19.11■□□□□ 0.65
SNX11-212ENST00000583320 PPP3CAQ08209 521 aa19.11■□□□□ 0.65
SNX11-212ENST00000583320 CBWD6Q4V339 395 aa19.11■□□□□ 0.65
SNX11-212ENST00000583320 WDR44Q5JSH3 913 aa19.11■□□□□ 0.65
SNX11-212ENST00000583320 CBWD3Q5JTY5 395 aa19.11■□□□□ 0.65
SNX11-212ENST00000583320 CBWD5Q5RIA9 395 aa19.11■□□□□ 0.65
SNX11-212ENST00000583320 KRT39Q6A163 491 aa19.11■□□□□ 0.65
SNX11-212ENST00000583320 CD300LGQ6UXG3 332 aa19.11■□□□□ 0.65
SNX11-212ENST00000583320 ZNF397Q8NF99 534 aaPredicted RBP19.11■□□□□ 0.65
SNX11-212ENST00000583320 FAM3CQ92520 227 aa19.11■□□□□ 0.65
SNX11-212ENST00000583320 CGRRF1Q99675 332 aa19.11■□□□□ 0.65
SNX11-212ENST00000583320 LSM14BQ9BX40 385 aaKnown RBP19.11■□□□□ 0.65
SNX11-212ENST00000583320 AVENQ9NQS1 362 aaPredicted RBP19.11■□□□□ 0.65
SNX11-212ENST00000583320 C2orf42Q9NWW7 574 aa19.11■□□□□ 0.65
SNX11-212ENST00000583320 SNTG2Q9NY99 539 aa19.11■□□□□ 0.65
SNX11-212ENST00000583320 PIAS3Q9Y6X2 628 aa19.11■□□□□ 0.65
SNX11-212ENST00000583320 PKD1L2Q7Z442 2459 aa19.11■□□□□ 0.65
SNX11-212ENST00000583320 ANK1P16157 1881 aa19.1■□□□□ 0.65
SNX11-212ENST00000583320 TTC26A0AVF1 554 aa19.1■□□□□ 0.65
SNX11-212ENST00000583320 I3L4J1 428 aa19.1■□□□□ 0.65
SNX11-212ENST00000583320 RECQL4O94761 1208 aa19.1■□□□□ 0.65
SNX11-212ENST00000583320 IL18RAPO95256 599 aa19.1■□□□□ 0.65
SNX11-212ENST00000583320 CHRNB1P11230 501 aa19.1■□□□□ 0.65
SNX11-212ENST00000583320 FECHP22830 423 aa19.1■□□□□ 0.65
SNX11-212ENST00000583320 PON1P27169 355 aa19.1■□□□□ 0.65
SNX11-212ENST00000583320 TKTP29401 623 aaKnown RBP19.1■□□□□ 0.65
SNX11-212ENST00000583320 KLK7P49862 253 aa19.1■□□□□ 0.65
SNX11-212ENST00000583320 DPY19L2P1Q6NXN4 242 aa19.1■□□□□ 0.65
SNX11-212ENST00000583320 VITQ6UXI7 678 aa19.1■□□□□ 0.65
SNX11-212ENST00000583320 EHBP1Q8NDI1 1231 aa19.1■□□□□ 0.65
SNX11-212ENST00000583320 CCDC127Q96BQ5 260 aa19.1■□□□□ 0.65
SNX11-212ENST00000583320 DDX27Q96GQ7 796 aaKnown RBP19.1■□□□□ 0.65
SNX11-212ENST00000583320 ZSWIM3Q96MP5 696 aa19.1■□□□□ 0.65
SNX11-212ENST00000583320 NUCKS1Q9H1E3 243 aaKnown RBP19.1■□□□□ 0.65
SNX11-212ENST00000583320 ZNF334Q9HCZ1 680 aaPredicted RBP19.1■□□□□ 0.65
SNX11-212ENST00000583320 RXFP3Q9NSD7 469 aa19.1■□□□□ 0.65
SNX11-212ENST00000583320 GCNT4Q9P109 453 aa19.1■□□□□ 0.65
SNX11-212ENST00000583320 CEP72Q9P209 647 aa19.1■□□□□ 0.65
SNX11-212ENST00000583320 K7ESF4 209 aa19.09■□□□□ 0.65
SNX11-212ENST00000583320 HARSP12081 509 aaKnown RBP19.09■□□□□ 0.65
SNX11-212ENST00000583320 KRT9P35527 623 aa19.09■□□□□ 0.65
SNX11-212ENST00000583320 GRM5P41594 1212 aa19.09■□□□□ 0.65
SNX11-212ENST00000583320 CXCL12P48061 93 aa19.09■□□□□ 0.65
SNX11-212ENST00000583320 GCLMP48507 274 aa19.09■□□□□ 0.65
SNX11-212ENST00000583320 ELAVL2Q12926 359 aaKnown RBP19.09■□□□□ 0.65
SNX11-212ENST00000583320 PDXDC1Q6P996 788 aa19.09■□□□□ 0.65
SNX11-212ENST00000583320 WDR49Q8IV35 697 aa19.09■□□□□ 0.65
SNX11-212ENST00000583320 CD302Q8IX05 232 aa19.09■□□□□ 0.65
SNX11-212ENST00000583320 OR8K1Q8NGG5 319 aa19.09■□□□□ 0.65
SNX11-212ENST00000583320 DNAJC7Q99615 494 aa19.09■□□□□ 0.65
SNX11-212ENST00000583320 CRACR2AQ9BSW2 395 aa19.09■□□□□ 0.65
SNX11-212ENST00000583320 IER2Q9BTL4 223 aa19.09■□□□□ 0.65
SNX11-212ENST00000583320 TRMT61BQ9BVS5 477 aaKnown RBP19.09■□□□□ 0.65
SNX11-212ENST00000583320 NAA15Q9BXJ9 866 aaKnown RBP19.09■□□□□ 0.65
SNX11-212ENST00000583320 GANQ9H2C0 597 aa19.09■□□□□ 0.65
SNX11-212ENST00000583320 KCNF1Q9H3M0 494 aa19.09■□□□□ 0.65
SNX11-212ENST00000583320 RPF1Q9H9Y2 349 aaKnown RBP19.09■□□□□ 0.65
SNX11-212ENST00000583320 FAM207AQ9NSI2 230 aaPredicted RBP19.09■□□□□ 0.65
SNX11-212ENST00000583320 RBM12Q9NTZ6 932 aaKnown RBP19.09■□□□□ 0.65
SNX11-212ENST00000583320 MYO6Q9UM54 1294 aa19.09■□□□□ 0.65
SNX11-212ENST00000583320 ZKSCAN5Q9Y2L8 839 aa19.09■□□□□ 0.65
SNX11-212ENST00000583320 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.09■□□□□ 0.65
SNX11-212ENST00000583320 DSPP15924 2871 aaKnown RBP19.08■□□□□ 0.65
SNX11-212ENST00000583320 GREB1Q4ZG55 1949 aa19.08■□□□□ 0.65
SNX11-212ENST00000583320 ARHGEF37A1IGU5 675 aa19.08■□□□□ 0.64
SNX11-212ENST00000583320 TM4SF5O14894 197 aa19.08■□□□□ 0.64
SNX11-212ENST00000583320 NOL4O94818 638 aa19.08■□□□□ 0.64
SNX11-212ENST00000583320 THP07101 528 aa19.08■□□□□ 0.64
SNX11-212ENST00000583320 GDI1P31150 447 aa19.08■□□□□ 0.64
SNX11-212ENST00000583320 TNFSF9P41273 254 aa19.08■□□□□ 0.64
SNX11-212ENST00000583320 VIPR2P41587 438 aa19.08■□□□□ 0.64
SNX11-212ENST00000583320 ADKP55263 362 aaKnown RBP19.08■□□□□ 0.64
SNX11-212ENST00000583320 CCZ1BP86790 482 aa19.08■□□□□ 0.64
SNX11-212ENST00000583320 CCZ1P86791 482 aaPredicted RBP19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms