RNA–Protein interactions for RNA: ENST00000582486.5

GGA3-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5 BASIC

Gene GGA3, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-213ENST00000582486 DDX42Q86XP3 938 aaKnown RBP eCLIP11.8□□□□□ -0.52
GGA3-213ENST00000582486 ARFGAP1Q8N6T3 406 aa11.8□□□□□ -0.52
GGA3-213ENST00000582486 ANKRD52Q8NB46 1076 aa11.8□□□□□ -0.52
GGA3-213ENST00000582486 EXD1Q8NHP7 514 aa11.8□□□□□ -0.52
GGA3-213ENST00000582486 SLC2A14Q8TDB8 520 aa11.8□□□□□ -0.52
GGA3-213ENST00000582486 RNF25Q96BH1 459 aaPredicted RBP11.8□□□□□ -0.52
GGA3-213ENST00000582486 UNC93B1Q9H1C4 597 aa11.8□□□□□ -0.52
GGA3-213ENST00000582486 PHF24Q9UPV7 400 aa11.8□□□□□ -0.52
GGA3-213ENST00000582486 BHMG1C9JSJ3 638 aaPredicted RBP11.79□□□□□ -0.52
GGA3-213ENST00000582486 GABBR2O75899 941 aa11.79□□□□□ -0.52
GGA3-213ENST00000582486 RALAP11233 206 aa11.79□□□□□ -0.52
GGA3-213ENST00000582486 ACAT1P24752 427 aaKnown RBP11.79□□□□□ -0.52
GGA3-213ENST00000582486 CDR1P51861 262 aa11.79□□□□□ -0.52
GGA3-213ENST00000582486 CYP1B1Q16678 543 aa11.79□□□□□ -0.52
GGA3-213ENST00000582486 UPP1Q16831 310 aa11.79□□□□□ -0.52
GGA3-213ENST00000582486 CCDC137Q6PK04 289 aaKnown RBP11.79□□□□□ -0.52
GGA3-213ENST00000582486 SND1Q7KZF4 910 aaKnown RBP eCLIP11.79□□□□□ -0.52
GGA3-213ENST00000582486 TMEM110Q86TL2 294 aa11.79□□□□□ -0.52
GGA3-213ENST00000582486 ECHDC2Q86YB7 292 aa11.79□□□□□ -0.52
GGA3-213ENST00000582486 SCUBE3Q8IX30 993 aa11.79□□□□□ -0.52
GGA3-213ENST00000582486 B3GALNT2Q8NCR0 500 aa11.79□□□□□ -0.52
GGA3-213ENST00000582486 C1orf54Q8WWF1 131 aa11.79□□□□□ -0.52
GGA3-213ENST00000582486 ACSF2Q96CM8 615 aaPredicted RBP11.79□□□□□ -0.52
GGA3-213ENST00000582486 PGBD4Q96DM1 585 aa11.79□□□□□ -0.52
GGA3-213ENST00000582486 TNIP3Q96KP6 325 aa11.79□□□□□ -0.52
GGA3-213ENST00000582486 TRIM51Q9BSJ1 452 aa11.79□□□□□ -0.52
GGA3-213ENST00000582486 SLC4A5Q9BY07 1137 aa11.79□□□□□ -0.52
GGA3-213ENST00000582486 MIS12Q9H081 205 aa11.79□□□□□ -0.52
GGA3-213ENST00000582486 INPP5FQ9Y2H2 1132 aa11.79□□□□□ -0.52
GGA3-213ENST00000582486 TIMM13Q9Y5L4 95 aaPredicted RBP11.79□□□□□ -0.52
GGA3-213ENST00000582486 MKI67P46013 3256 aaKnown RBP11.79□□□□□ -0.52
GGA3-213ENST00000582486 PI4K2BG5E9Z4 385 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 GABRDO14764 452 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 LRCH4O75427 683 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 GRAP2O75791 330 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 SETSIPP0DME0 302 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 RPL9P32969 192 aaKnown RBP11.78□□□□□ -0.52
GGA3-213ENST00000582486 KCNJ1P48048 391 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 DHX34Q14147 1143 aaKnown RBP11.78□□□□□ -0.52
GGA3-213ENST00000582486 SMC1AQ14683 1233 aaKnown RBP11.78□□□□□ -0.52
GGA3-213ENST00000582486 TAF5Q15542 800 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 LRRC38Q5VT99 294 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 ZNF598Q86UK7 904 aaKnown RBP11.78□□□□□ -0.52
GGA3-213ENST00000582486 B3GNT5Q9BYG0 378 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 OSBPL8Q9BZF1 889 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.78□□□□□ -0.52
GGA3-213ENST00000582486 PCYOX1Q9UHG3 505 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 UTP11Q9Y3A2 253 aaKnown RBP11.78□□□□□ -0.52
GGA3-213ENST00000582486 FRMPD3Q5JV73 1810 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 DAPK3O43293 454 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 FAM153BP0C7A2 387 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 SKIP12755 728 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 IL1R2P27930 398 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 TKTP29401 623 aaKnown RBP11.78□□□□□ -0.52
GGA3-213ENST00000582486 COILP38432 576 aaPredicted RBP11.78□□□□□ -0.52
GGA3-213ENST00000582486 PTGIRP43119 386 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 BCAT1P54687 386 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 SLC25A11Q02978 314 aaKnown RBP11.78□□□□□ -0.52
GGA3-213ENST00000582486 BST2Q10589 180 aaKnown RBP11.78□□□□□ -0.52
GGA3-213ENST00000582486 FAM153CQ494X1 144 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 KIAA0319Q5VV43 1072 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 TRNP1Q6NT89 227 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 EMBQ6PCB8 327 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 OLFML1Q6UWY5 402 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 DSTYKQ6XUX3 929 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 JAMLQ86YT9 394 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 RCOR2Q8IZ40 523 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 KRT222Q8N1A0 295 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 TRIM31Q9BZY9 425 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 LRRC19Q9H756 370 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 RGS18Q9NS28 235 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 DDX43Q9NXZ2 648 aaKnown RBP11.78□□□□□ -0.52
GGA3-213ENST00000582486 FAM153AQ9UHL3 310 aa11.78□□□□□ -0.52
GGA3-213ENST00000582486 C2CD4BA6NLJ0 364 aa11.77□□□□□ -0.52
GGA3-213ENST00000582486 CLDN5O00501 218 aa11.77□□□□□ -0.52
GGA3-213ENST00000582486 PAPSS1O43252 624 aaPredicted RBP11.77□□□□□ -0.52
GGA3-213ENST00000582486 B3GAT3O94766 335 aa11.77□□□□□ -0.52
GGA3-213ENST00000582486 KRT1P04264 644 aa11.77□□□□□ -0.52
GGA3-213ENST00000582486 FAM163BP0C2L3 166 aa11.77□□□□□ -0.52
GGA3-213ENST00000582486 PTPN1P18031 435 aaKnown RBP11.77□□□□□ -0.52
GGA3-213ENST00000582486 ECHS1P30084 290 aa11.77□□□□□ -0.52
GGA3-213ENST00000582486 FLT3P36888 993 aa11.77□□□□□ -0.52
GGA3-213ENST00000582486 CDK7P50613 346 aa11.77□□□□□ -0.52
GGA3-213ENST00000582486 ZNF143P52747 638 aaPredicted RBP11.77□□□□□ -0.52
GGA3-213ENST00000582486 KLF1Q13351 362 aaPredicted RBP11.77□□□□□ -0.52
GGA3-213ENST00000582486 CUL1Q13616 776 aa11.77□□□□□ -0.52
GGA3-213ENST00000582486 HLTFQ14527 1009 aaKnown RBP eCLIP11.77□□□□□ -0.523e-6■■□□□ 13
GGA3-213ENST00000582486 MTFR1Q15390 333 aa11.77□□□□□ -0.52
GGA3-213ENST00000582486 SMTNL2Q2TAL5 461 aa11.77□□□□□ -0.52
GGA3-213ENST00000582486 PAN2Q504Q3 1202 aaKnown RBP11.77□□□□□ -0.52
GGA3-213ENST00000582486 TIGD5Q53EQ6 642 aa11.77□□□□□ -0.52
GGA3-213ENST00000582486 KCNT1Q5JUK3 1230 aa11.77□□□□□ -0.52
GGA3-213ENST00000582486 MFSD7Q6UXD7 560 aa11.77□□□□□ -0.52
GGA3-213ENST00000582486 CCDC105Q8IYK2 499 aa11.77□□□□□ -0.52
GGA3-213ENST00000582486 FUKQ8N0W3 1084 aa11.77□□□□□ -0.52
GGA3-213ENST00000582486 C12orf50Q8NA57 414 aaPredicted RBP11.77□□□□□ -0.52
GGA3-213ENST00000582486 STK32AQ8WU08 396 aa11.77□□□□□ -0.52
GGA3-213ENST00000582486 MAIP1Q8WWC4 291 aa11.77□□□□□ -0.52
GGA3-213ENST00000582486 RXFP2Q8WXD0 754 aa11.77□□□□□ -0.52
GGA3-213ENST00000582486 ATG4AQ8WYN0 398 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms