RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 MTIF2P46199 727 aaKnown RBP11.09□□□□□ -0.63
SS18-221ENST00000582448 BCAR1P56945 870 aa11.09□□□□□ -0.63
SS18-221ENST00000582448 ALCAMQ13740 583 aa11.09□□□□□ -0.63
SS18-221ENST00000582448 ARSHQ5FYA8 562 aa11.09□□□□□ -0.63
SS18-221ENST00000582448 CLLU1OSQ5K130 101 aa11.09□□□□□ -0.63
SS18-221ENST00000582448 FKBP15Q5T1M5 1219 aa11.09□□□□□ -0.63
SS18-221ENST00000582448 CENPPQ6IPU0 288 aa11.09□□□□□ -0.63
SS18-221ENST00000582448 TTI2Q6NXR4 508 aa11.09□□□□□ -0.63
SS18-221ENST00000582448 TMC5Q6UXY8 1006 aa11.09□□□□□ -0.63
SS18-221ENST00000582448 VPS52Q8N1B4 723 aa11.09□□□□□ -0.63
SS18-221ENST00000582448 TMEM169Q96HH4 297 aa11.09□□□□□ -0.63
SS18-221ENST00000582448 DRC1Q96MC2 740 aa11.09□□□□□ -0.63
SS18-221ENST00000582448 MED15Q96RN5 788 aa11.09□□□□□ -0.63
SS18-221ENST00000582448 MAP7D2Q96T17 732 aa11.09□□□□□ -0.63
SS18-221ENST00000582448 OLFML3Q9NRN5 406 aa11.09□□□□□ -0.63
SS18-221ENST00000582448 TBC1D7Q9P0N9 293 aa11.09□□□□□ -0.63
SS18-221ENST00000582448 LARSQ9P2J5 1176 aaKnown RBP11.09□□□□□ -0.63
SS18-221ENST00000582448 GABBR1Q9UBS5 961 aa11.09□□□□□ -0.63
SS18-221ENST00000582448 FBXL21Q9UKT6 434 aa11.09□□□□□ -0.63
SS18-221ENST00000582448 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.09□□□□□ -0.63
SS18-221ENST00000582448 ZFHX2Q9C0A1 2572 aaPredicted RBP11.09□□□□□ -0.63
SS18-221ENST00000582448 MYO10Q9HD67 2058 aa11.08□□□□□ -0.63
SS18-221ENST00000582448 FNDC1Q4ZHG4 1894 aaPredicted RBP11.08□□□□□ -0.64
SS18-221ENST00000582448 CFAP54Q96N23 3096 aa11.08□□□□□ -0.64
SS18-221ENST00000582448 TRIM49BA6NDI0 452 aa11.08□□□□□ -0.64
SS18-221ENST00000582448 CALUO43852 315 aaPredicted RBP11.08□□□□□ -0.64
SS18-221ENST00000582448 ZC3H11AO75152 810 aaKnown RBP eCLIP11.08□□□□□ -0.64
SS18-221ENST00000582448 CSDE1O75534 798 aaKnown RBP11.08□□□□□ -0.64
SS18-221ENST00000582448 GCNT3O95395 438 aa11.08□□□□□ -0.64
SS18-221ENST00000582448 TGFB1P01137 390 aa11.08□□□□□ -0.64
SS18-221ENST00000582448 RPL13P26373 211 aaKnown RBP11.08□□□□□ -0.64
SS18-221ENST00000582448 CLCN5P51795 746 aa11.08□□□□□ -0.64
SS18-221ENST00000582448 COPB1P53618 953 aaKnown RBP11.08□□□□□ -0.64
SS18-221ENST00000582448 FKBP3Q00688 224 aaKnown RBP11.08□□□□□ -0.64
SS18-221ENST00000582448 TRIM14Q14142 442 aa11.08□□□□□ -0.64
SS18-221ENST00000582448 NR1I3Q14994 352 aa11.08□□□□□ -0.64
SS18-221ENST00000582448 KRT31Q15323 416 aa11.08□□□□□ -0.64
SS18-221ENST00000582448 XKR9Q5GH70 373 aa11.08□□□□□ -0.64
SS18-221ENST00000582448 ANKRD40Q6AI12 368 aa11.08□□□□□ -0.64
SS18-221ENST00000582448 FAM43BQ6ZT52 329 aaPredicted RBP11.08□□□□□ -0.64
SS18-221ENST00000582448 C1orf186Q6ZWK4 172 aa11.08□□□□□ -0.64
SS18-221ENST00000582448 SFR1Q86XK3 245 aa11.08□□□□□ -0.64
SS18-221ENST00000582448 ZDHHC14Q8IZN3 488 aa11.08□□□□□ -0.64
SS18-221ENST00000582448 CCDC112Q8NEF3 446 aa11.08□□□□□ -0.64
SS18-221ENST00000582448 FEZF2Q8TBJ5 459 aa11.08□□□□□ -0.64
SS18-221ENST00000582448 HPS3Q969F9 1004 aa11.08□□□□□ -0.64
SS18-221ENST00000582448 ACSF2Q96CM8 615 aaPredicted RBP11.08□□□□□ -0.64
SS18-221ENST00000582448 NAP1L5Q96NT1 182 aaPredicted RBP11.08□□□□□ -0.64
SS18-221ENST00000582448 CORO1BQ9BR76 489 aa11.08□□□□□ -0.64
SS18-221ENST00000582448 GBP3Q9H0R5 595 aa11.08□□□□□ -0.64
SS18-221ENST00000582448 CYP26B1Q9NR63 512 aa11.08□□□□□ -0.64
SS18-221ENST00000582448 KCNG1Q9UIX4 513 aa11.08□□□□□ -0.64
SS18-221ENST00000582448 UBE4BO95155 1302 aa11.08□□□□□ -0.64
SS18-221ENST00000582448 LRRC10BA6NIK2 292 aa11.07□□□□□ -0.64
SS18-221ENST00000582448 CETN3O15182 167 aa11.07□□□□□ -0.64
SS18-221ENST00000582448 EIF3DO15371 548 aaKnown RBP eCLIP11.07□□□□□ -0.64
SS18-221ENST00000582448 MAGEB2O15479 319 aa11.07□□□□□ -0.64
SS18-221ENST00000582448 EOMESO95936 686 aa11.07□□□□□ -0.64
SS18-221ENST00000582448 MYBP10242 640 aa11.07□□□□□ -0.64
SS18-221ENST00000582448 EIF4BP23588 611 aaKnown RBP11.07□□□□□ -0.64
SS18-221ENST00000582448 UBXN1Q04323 297 aa11.07□□□□□ -0.64
SS18-221ENST00000582448 CCDC40Q4G0X9 1142 aa11.07□□□□□ -0.64
SS18-221ENST00000582448 KIAA1841Q6NSI8 718 aa11.07□□□□□ -0.64
SS18-221ENST00000582448 LRRC8AQ8IWT6 810 aa11.07□□□□□ -0.64
SS18-221ENST00000582448 GOLGA5Q8TBA6 731 aa11.07□□□□□ -0.64
SS18-221ENST00000582448 FBLIM1Q8WUP2 373 aa11.07□□□□□ -0.64
SS18-221ENST00000582448 CNOT6LQ96LI5 555 aaKnown RBP11.07□□□□□ -0.64
SS18-221ENST00000582448 DUSP9Q99956 384 aaKnown RBP11.07□□□□□ -0.64
SS18-221ENST00000582448 TUBGCP2Q9BSJ2 902 aa11.07□□□□□ -0.64
SS18-221ENST00000582448 VPS16Q9H269 839 aa11.07□□□□□ -0.64
SS18-221ENST00000582448 ADAMTS10Q9H324 1103 aa11.07□□□□□ -0.64
SS18-221ENST00000582448 TAB2Q9NYJ8 693 aa11.07□□□□□ -0.64
SS18-221ENST00000582448 INPP5FQ9Y2H2 1132 aa11.07□□□□□ -0.64
SS18-221ENST00000582448 EVPLQ92817 2033 aa11.07□□□□□ -0.64
SS18-221ENST00000582448 PLXNA3P51805 1871 aa11.06□□□□□ -0.64
SS18-221ENST00000582448 A0A0U1RQF3 1178 aa11.06□□□□□ -0.64
SS18-221ENST00000582448 PDXKO00764 312 aa11.06□□□□□ -0.64
SS18-221ENST00000582448 USO1O60763 962 aaKnown RBP11.06□□□□□ -0.64
SS18-221ENST00000582448 KLRC2P26717 231 aa11.06□□□□□ -0.64
SS18-221ENST00000582448 ABCD1P33897 745 aa11.06□□□□□ -0.64
SS18-221ENST00000582448 RARRES1P49788 294 aa11.06□□□□□ -0.64
SS18-221ENST00000582448 DNM2P50570 870 aa11.06□□□□□ -0.64
SS18-221ENST00000582448 PMS1P54277 932 aaKnown RBP11.06□□□□□ -0.64
SS18-221ENST00000582448 RNASELQ05823 741 aaKnown RBP11.06□□□□□ -0.64
SS18-221ENST00000582448 ANGPT1Q15389 498 aa11.06□□□□□ -0.64
SS18-221ENST00000582448 KNOP1Q1ED39 458 aaKnown RBP11.06□□□□□ -0.64
SS18-221ENST00000582448 EDRF1Q3B7T1 1238 aa11.06□□□□□ -0.64
SS18-221ENST00000582448 XKR3Q5GH77 459 aa11.06□□□□□ -0.64
SS18-221ENST00000582448 CWF19L1Q69YN2 538 aaKnown RBP11.06□□□□□ -0.64
SS18-221ENST00000582448 HS2ST1Q7LGA3 356 aa11.06□□□□□ -0.64
SS18-221ENST00000582448 ERMP1Q7Z2K6 904 aa11.06□□□□□ -0.64
SS18-221ENST00000582448 TMEM173Q86WV6 379 aaPredicted RBP11.06□□□□□ -0.64
SS18-221ENST00000582448 NELFCDQ8IXH7 590 aa11.06□□□□□ -0.64
SS18-221ENST00000582448 LPPQ93052 612 aa11.06□□□□□ -0.64
SS18-221ENST00000582448 IQCDQ96DY2 449 aa11.06□□□□□ -0.64
SS18-221ENST00000582448 CEP170P1Q96L14 293 aa11.06□□□□□ -0.64
SS18-221ENST00000582448 ZNF830Q96NB3 372 aaPredicted RBP11.06□□□□□ -0.64
SS18-221ENST00000582448 ZBP1Q9H171 429 aa11.06□□□□□ -0.64
SS18-221ENST00000582448 NRBP2Q9NSY0 501 aa11.06□□□□□ -0.64
SS18-221ENST00000582448 ACTL7BQ9Y614 415 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms