RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 TMTC1Q8IUR5 882 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 SPATA2LQ8IUW3 424 aaPredicted RBP10.1□□□□□ -0.79
RFFL-210ENST00000582308 PASD1Q8IV76 773 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 WDTC1Q8N5D0 677 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 ANKRD52Q8NB46 1076 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 MRPL38Q96DV4 380 aaKnown RBP10.1□□□□□ -0.79
RFFL-210ENST00000582308 ZNF830Q96NB3 372 aaPredicted RBP10.1□□□□□ -0.79
RFFL-210ENST00000582308 SMOQ99835 787 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 EMILIN2Q9BXX0 1053 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 DUSP16Q9BY84 665 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 LHX5Q9H2C1 402 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 ABCB6Q9NP58 842 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 ABI2Q9NYB9 513 aaPredicted RBP10.1□□□□□ -0.79
RFFL-210ENST00000582308 AFF4Q9UHB7 1163 aaKnown RBP10.1□□□□□ -0.79
RFFL-210ENST00000582308 SLC27A5Q9Y2P5 690 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 PCDHB5Q9Y5E4 795 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 BRWD1Q9NSI6 2320 aa10.1□□□□□ -0.79
RFFL-210ENST00000582308 MYO16Q9Y6X6 1858 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 FAM170AA1A519 330 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 PER2O15055 1255 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 TGM5O43548 720 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 CLASP2O75122 1294 aaKnown RBP10.09□□□□□ -0.79
RFFL-210ENST00000582308 AP1G2O75843 785 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 GABBR2O75899 941 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 CYP1A1P04798 512 aaPredicted RBP10.09□□□□□ -0.79
RFFL-210ENST00000582308 ADH1AP07327 375 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 SPATA31D3P0C874 917 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 FAM200BP0CF97 657 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 UNGP13051 313 aaPredicted RBP10.09□□□□□ -0.79
RFFL-210ENST00000582308 ATF2P15336 505 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 KLRC2P26717 231 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 CDH5P33151 784 aaPredicted RBP10.09□□□□□ -0.79
RFFL-210ENST00000582308 GPD2P43304 727 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 MAGEA11P43364 429 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 BCAT1P54687 386 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 NOMO3P69849 1222 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 PDE4CQ08493 712 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 GRIN2CQ14957 1233 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 CLEC16AQ2KHT3 1053 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 CFAP221Q4G0U5 840 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 NAA35Q5VZE5 725 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 RAD9BQ6WBX8 426 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 TRIM72Q6ZMU5 477 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 SPATA31D4Q6ZUB0 917 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 ZMIZ2Q8NF64 920 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 SPPL2BQ8TCT7 592 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 C2orf15Q8WU43 125 aaKnown RBP10.09□□□□□ -0.79
RFFL-210ENST00000582308 SLC22A17Q8WUG5 538 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 SLC35F5Q8WV83 523 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 SECISBP2LQ93073 1101 aaKnown RBP10.09□□□□□ -0.79
RFFL-210ENST00000582308 SMARCD1Q96GM5 515 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 FUBP3Q96I24 572 aaKnown RBP eCLIP10.09□□□□□ -0.79
RFFL-210ENST00000582308 CCDC42Q96M95 316 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 KCNK16Q96T55 309 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.09□□□□□ -0.79
RFFL-210ENST00000582308 PDCL3Q9H2J4 239 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 KCNF1Q9H3M0 494 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 PRDM12Q9H4Q4 367 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 CSNK1G1Q9HCP0 422 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 KRT82Q9NSB4 513 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 SEPT11Q9NVA2 429 aaKnown RBP10.09□□□□□ -0.79
RFFL-210ENST00000582308 TAS2R14Q9NYV8 317 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 HESX1Q9UBX0 185 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 ADAMTS1Q9UHI8 967 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 CYTH4Q9UIA0 394 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 NENFQ9UMX5 172 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 ANAPC1Q9H1A4 1944 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 NOTCH4Q99466 2003 aa10.09□□□□□ -0.79
RFFL-210ENST00000582308 ATP8B3O60423 1300 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 HHLA1C9JL84 531 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 F8VP50 259 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 ZNF263O14978 683 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 AKR1B10O60218 316 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 SOAT2O75908 522 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 LSM8O95777 96 aaKnown RBP10.08□□□□□ -0.8
RFFL-210ENST00000582308 HAPLN1P10915 354 aaPredicted RBP10.08□□□□□ -0.8
RFFL-210ENST00000582308 NPR3P17342 541 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 ANXA13P27216 316 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 GRIK1P39086 918 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 GPR15P49685 360 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 CLCN4P51793 760 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 KIF11P52732 1056 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 MAP3K7CLP57077 242 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 GFPT1Q06210 699 aaPredicted RBP10.08□□□□□ -0.8
RFFL-210ENST00000582308 BST2Q10589 180 aaKnown RBP10.08□□□□□ -0.8
RFFL-210ENST00000582308 SLC18A3Q16572 532 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 PTPROQ16827 1216 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 DUSP6Q16828 381 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 PMF1Q6P1K2 205 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 VSTM1Q6UX27 236 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 CLEC20AQ6ZU45 233 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 RBM23Q86U06 439 aaKnown RBP10.08□□□□□ -0.8
RFFL-210ENST00000582308 VPS36Q86VN1 386 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 DNAAF5Q86Y56 855 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 CCDC170Q8IYT3 715 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 TMEM35BQ8NCS4 154 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 C1orf131Q8NDD1 294 aaKnown RBP10.08□□□□□ -0.8
RFFL-210ENST00000582308 CCDC112Q8NEF3 446 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 CPA5Q8WXQ8 436 aa10.08□□□□□ -0.8
RFFL-210ENST00000582308 DEF6Q9H4E7 631 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms