RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 ZBED3Q96IU2 234 aaPredicted RBP14.35□□□□□ -0.11
RNF43-205ENST00000581868 MIPEPQ99797 713 aa14.35□□□□□ -0.11
RNF43-205ENST00000581868 LPXNO60711 386 aa14.35□□□□□ -0.11
RNF43-205ENST00000581868 PTDSS1P48651 473 aaKnown RBP14.35□□□□□ -0.11
RNF43-205ENST00000581868 HMGCS2P54868 508 aa14.35□□□□□ -0.11
RNF43-205ENST00000581868 PSMC1P62191 440 aaKnown RBP14.35□□□□□ -0.11
RNF43-205ENST00000581868 SLC25A11Q02978 314 aaKnown RBP14.35□□□□□ -0.11
RNF43-205ENST00000581868 ZBTB16Q05516 673 aa14.35□□□□□ -0.11
RNF43-205ENST00000581868 BLMHQ13867 455 aa14.35□□□□□ -0.11
RNF43-205ENST00000581868 CTC1Q2NKJ3 1217 aa14.35□□□□□ -0.11
RNF43-205ENST00000581868 IGDCC3Q8IVU1 814 aa14.35□□□□□ -0.11
RNF43-205ENST00000581868 BRSK2Q8IWQ3 736 aa14.35□□□□□ -0.11
RNF43-205ENST00000581868 MZB1Q8WU39 189 aa14.35□□□□□ -0.11
RNF43-205ENST00000581868 PRR11Q96HE9 360 aaPredicted RBP14.35□□□□□ -0.11
RNF43-205ENST00000581868 TSSK1BQ9BXA7 367 aa14.35□□□□□ -0.11
RNF43-205ENST00000581868 CALN1Q9BXU9 219 aa14.35□□□□□ -0.11
RNF43-205ENST00000581868 TRIM55Q9BYV6 548 aa14.35□□□□□ -0.11
RNF43-205ENST00000581868 SYNCQ9H7C4 482 aa14.35□□□□□ -0.11
RNF43-205ENST00000581868 SSU72Q9NP77 194 aaKnown RBP14.35□□□□□ -0.11
RNF43-205ENST00000581868 ARL8BQ9NVJ2 186 aa14.35□□□□□ -0.11
RNF43-205ENST00000581868 MAFBQ9Y5Q3 323 aaPredicted RBP14.35□□□□□ -0.11
RNF43-205ENST00000581868 C2orf71A6NGG8 1288 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 ITGBL1O95965 494 aaPredicted RBP14.34□□□□□ -0.11
RNF43-205ENST00000581868 PDHA1P08559 390 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 SRGAP2CP0DJJ0 459 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 EIF4BP23588 611 aaKnown RBP14.34□□□□□ -0.11
RNF43-205ENST00000581868 ELK3P41970 407 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 RAP1GAPP47736 663 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 BACE1P56817 501 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 EIF3EP60228 445 aaKnown RBP14.34□□□□□ -0.11
RNF43-205ENST00000581868 HADHQ16836 314 aaKnown RBP14.34□□□□□ -0.11
RNF43-205ENST00000581868 WASHC2DQ5SRD0 308 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 WDR49Q8IV35 697 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 NIPA2Q8N8Q9 360 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 ZNF668Q96K58 619 aaPredicted RBP14.34□□□□□ -0.11
RNF43-205ENST00000581868 FAM111AQ96PZ2 611 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 OSBPL1AQ9BXW6 950 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 CADM1Q9BY67 442 aaKnown RBP14.34□□□□□ -0.11
RNF43-205ENST00000581868 ZNF518BQ9C0D4 1074 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 FBXO6Q9NRD1 293 aaPredicted RBP14.34□□□□□ -0.11
RNF43-205ENST00000581868 CYTH4Q9UIA0 394 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 ZNF214Q9UL59 606 aaPredicted RBP14.34□□□□□ -0.11
RNF43-205ENST00000581868 POLIQ9UNA4 740 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 LRRC42Q9Y546 428 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 IKBKGQ9Y6K9 419 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 RGPD3A6NKT7 1758 aaPredicted RBP14.34□□□□□ -0.11
RNF43-205ENST00000581868 RGPD4Q7Z3J3 1758 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 TRAFD1O14545 582 aaPredicted RBP14.34□□□□□ -0.11
RNF43-205ENST00000581868 TM9SF1O15321 606 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 ADCY3O60266 1144 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 HAUS5O94927 633 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 LUC7L3O95232 432 aaKnown RBP14.34□□□□□ -0.11
RNF43-205ENST00000581868 KRT7P08729 469 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 SERPINB3P29508 390 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 GCKP35557 465 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 ARFIP2P53365 341 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 PTK7Q13308 1070 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 DUOXA2Q1HG44 320 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 SGSM1Q2NKQ1 1148 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 ZNF699Q32M78 642 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 KHDC1Q4VXA5 237 aaKnown RBP14.34□□□□□ -0.11
RNF43-205ENST00000581868 BBS12Q6ZW61 710 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 POLNQ7Z5Q5 900 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 APBB1IPQ7Z5R6 666 aaPredicted RBP14.34□□□□□ -0.11
RNF43-205ENST00000581868 ZC3H18Q86VM9 953 aaKnown RBP14.34□□□□□ -0.11
RNF43-205ENST00000581868 TTC13Q8NBP0 860 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 REPS2Q8NFH8 660 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 PRPF31Q8WWY3 499 aaKnown RBP14.34□□□□□ -0.11
RNF43-205ENST00000581868 SERAC1Q96JX3 654 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 DHRS4Q9BTZ2 278 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 VPS11Q9H270 941 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 SAR1AQ9NR31 198 aa14.34□□□□□ -0.11
RNF43-205ENST00000581868 METTL5Q9NRN9 209 aaKnown RBP14.34□□□□□ -0.11
RNF43-205ENST00000581868 BGNP21810 368 aa14.33□□□□□ -0.11
RNF43-205ENST00000581868 PSEN1P49768 467 aa14.33□□□□□ -0.11
RNF43-205ENST00000581868 YWHAGP61981 247 aaKnown RBP eCLIP14.33□□□□□ -0.11
RNF43-205ENST00000581868 FAAP100Q0VG06 881 aa14.33□□□□□ -0.11
RNF43-205ENST00000581868 NPNTQ6UXI9 565 aa14.33□□□□□ -0.11
RNF43-205ENST00000581868 DSTYKQ6XUX3 929 aa14.33□□□□□ -0.11
RNF43-205ENST00000581868 CDR2LQ86X02 465 aaPredicted RBP14.33□□□□□ -0.11
RNF43-205ENST00000581868 TMEM130Q8N3G9 435 aa14.33□□□□□ -0.11
RNF43-205ENST00000581868 SIGLEC16A6NMB1 481 aa14.33□□□□□ -0.12
RNF43-205ENST00000581868 AVILO75366 819 aa14.33□□□□□ -0.12
RNF43-205ENST00000581868 KRT19P08727 400 aa14.33□□□□□ -0.12
RNF43-205ENST00000581868 RBP3P10745 1247 aa14.33□□□□□ -0.12
RNF43-205ENST00000581868 PYGBP11216 843 aa14.33□□□□□ -0.12
RNF43-205ENST00000581868 POLR2BP30876 1174 aaKnown RBP14.33□□□□□ -0.12
RNF43-205ENST00000581868 PEX19P40855 299 aa14.33□□□□□ -0.12
RNF43-205ENST00000581868 CDH8P55286 799 aa14.33□□□□□ -0.12
RNF43-205ENST00000581868 DPYSL3Q14195 570 aa14.33□□□□□ -0.12
RNF43-205ENST00000581868 KBTBD12Q3ZCT8 623 aa14.33□□□□□ -0.12
RNF43-205ENST00000581868 NBPF12Q5TAG4 269 aaPredicted RBP14.33□□□□□ -0.12
RNF43-205ENST00000581868 PRAMEF18Q5VWM3 479 aa14.33□□□□□ -0.12
RNF43-205ENST00000581868 THNSL1Q8IYQ7 743 aa14.33□□□□□ -0.12
RNF43-205ENST00000581868 SPATA18Q8TC71 538 aa14.33□□□□□ -0.12
RNF43-205ENST00000581868 CYTH2Q99418 400 aa14.33□□□□□ -0.12
RNF43-205ENST00000581868 TMEM120AQ9BXJ8 343 aa14.33□□□□□ -0.12
RNF43-205ENST00000581868 LNPEPQ9UIQ6 1025 aa14.33□□□□□ -0.12
RNF43-205ENST00000581868 STRIP2Q9ULQ0 834 aa14.33□□□□□ -0.12
RNF43-205ENST00000581868 E7ESA3 106 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms