RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 OTOGLQ3ZCN5 2332 aa23.87■■□□□ 1.41
CASC3-207ENST00000581849 EP300Q09472 2414 aaPredicted RBP23.87■■□□□ 1.41
CASC3-207ENST00000581849 A0A1W2PQ27 194 aa23.87■■□□□ 1.41
CASC3-207ENST00000581849 A0A1W2PQ64 194 aa23.87■■□□□ 1.41
CASC3-207ENST00000581849 A0A1W2PQD8 194 aa23.87■■□□□ 1.41
CASC3-207ENST00000581849 LILRB5O75023 590 aa23.87■■□□□ 1.41
CASC3-207ENST00000581849 ATP2C2O75185 946 aa23.87■■□□□ 1.41
CASC3-207ENST00000581849 KIF20AO95235 890 aa23.87■■□□□ 1.41
CASC3-207ENST00000581849 PFKLP17858 780 aa23.87■■□□□ 1.41
CASC3-207ENST00000581849 GNL1P36915 607 aaPredicted RBP23.87■■□□□ 1.41
CASC3-207ENST00000581849 PSMC1P62191 440 aaKnown RBP23.87■■□□□ 1.41
CASC3-207ENST00000581849 TXNDC8Q6A555 127 aa23.87■■□□□ 1.41
CASC3-207ENST00000581849 SCN4BQ8IWT1 228 aa23.87■■□□□ 1.41
CASC3-207ENST00000581849 FSIP1Q8NA03 581 aa23.87■■□□□ 1.41
CASC3-207ENST00000581849 ATRIPQ8WXE1 791 aa23.87■■□□□ 1.41
CASC3-207ENST00000581849 CCDC47Q96A33 483 aaKnown RBP23.87■■□□□ 1.41
CASC3-207ENST00000581849 ZFYVE19Q96K21 471 aa23.87■■□□□ 1.41
CASC3-207ENST00000581849 MRPL45Q9BRJ2 306 aaKnown RBP23.87■■□□□ 1.41
CASC3-207ENST00000581849 GTSE1Q9NYZ3 720 aa23.87■■□□□ 1.41
CASC3-207ENST00000581849 TRIM66O15016 1216 aa23.86■■□□□ 1.41
CASC3-207ENST00000581849 PDE6CP51160 858 aa23.86■■□□□ 1.41
CASC3-207ENST00000581849 NRLP54845 237 aa23.86■■□□□ 1.41
CASC3-207ENST00000581849 FAM160A1Q05DH4 1040 aa23.86■■□□□ 1.41
CASC3-207ENST00000581849 SYNPOQ8N3V7 929 aa23.86■■□□□ 1.41
CASC3-207ENST00000581849 SPEM1Q8N4L4 309 aa23.86■■□□□ 1.41
CASC3-207ENST00000581849 SUMF1Q8NBK3 374 aa23.86■■□□□ 1.41
CASC3-207ENST00000581849 PCED1BQ96HM7 432 aa23.86■■□□□ 1.41
CASC3-207ENST00000581849 SMG9Q9H0W8 520 aaKnown RBP23.86■■□□□ 1.41
CASC3-207ENST00000581849 ANAPC1Q9H1A4 1944 aa23.85■■□□□ 1.41
CASC3-207ENST00000581849 TRAV19A0A0A6YYK7 116 aa23.85■■□□□ 1.41
CASC3-207ENST00000581849 PHACTR2O75167 634 aa23.85■■□□□ 1.41
CASC3-207ENST00000581849 PAPSS2O95340 614 aaPredicted RBP23.85■■□□□ 1.41
CASC3-207ENST00000581849 RPN1P04843 607 aaKnown RBP23.85■■□□□ 1.41
CASC3-207ENST00000581849 PDGFRBP09619 1106 aa23.85■■□□□ 1.41
CASC3-207ENST00000581849 TDGF1P13385 188 aa23.85■■□□□ 1.41
CASC3-207ENST00000581849 ANXA13P27216 316 aa23.85■■□□□ 1.41
CASC3-207ENST00000581849 SOX9P48436 509 aa23.85■■□□□ 1.41
CASC3-207ENST00000581849 MYL6P60660 151 aa23.85■■□□□ 1.41
CASC3-207ENST00000581849 TXNDC11Q6PKC3 985 aa23.85■■□□□ 1.41
CASC3-207ENST00000581849 DENND5BQ6ZUT9 1274 aa23.85■■□□□ 1.41
CASC3-207ENST00000581849 STKLD1Q8NE28 680 aa23.85■■□□□ 1.41
CASC3-207ENST00000581849 OR6B3Q8NGW1 331 aa23.85■■□□□ 1.41
CASC3-207ENST00000581849 PLEKHO2Q8TD55 490 aa23.85■■□□□ 1.41
CASC3-207ENST00000581849 RUBCNQ92622 972 aa23.85■■□□□ 1.41
CASC3-207ENST00000581849 C8orf48Q96LL4 319 aa23.85■■□□□ 1.41
CASC3-207ENST00000581849 TTLL2Q9BWV7 592 aa23.85■■□□□ 1.41
CASC3-207ENST00000581849 GKN1Q9NS71 199 aa23.85■■□□□ 1.41
CASC3-207ENST00000581849 TRAF3IP3Q9Y228 551 aa23.85■■□□□ 1.41
CASC3-207ENST00000581849 CCL26Q9Y258 94 aa23.85■■□□□ 1.41
CASC3-207ENST00000581849 ZNF292O60281 2723 aa23.85■■□□□ 1.41
CASC3-207ENST00000581849 LRRIQ3A6PVS8 624 aaPredicted RBP23.84■■□□□ 1.41
CASC3-207ENST00000581849 MAPK13O15264 365 aa23.84■■□□□ 1.41
CASC3-207ENST00000581849 RHOBTB3O94955 611 aa23.84■■□□□ 1.41
CASC3-207ENST00000581849 NR3C1P04150 777 aa23.84■■□□□ 1.41
CASC3-207ENST00000581849 USP17L7P0C7H9 530 aa23.84■■□□□ 1.41
CASC3-207ENST00000581849 TCF3P15923 654 aa23.84■■□□□ 1.41
CASC3-207ENST00000581849 BDNFP23560 247 aa23.84■■□□□ 1.41
CASC3-207ENST00000581849 GRIK1P39086 918 aa23.84■■□□□ 1.41
CASC3-207ENST00000581849 PPP3CCP48454 512 aa23.84■■□□□ 1.41
CASC3-207ENST00000581849 NDUFA8P51970 172 aa23.84■■□□□ 1.41
CASC3-207ENST00000581849 NOP14P78316 857 aaKnown RBP23.84■■□□□ 1.41
CASC3-207ENST00000581849 AMPD2Q01433 879 aa23.84■■□□□ 1.41
CASC3-207ENST00000581849 CYP27A1Q02318 531 aa23.84■■□□□ 1.41
CASC3-207ENST00000581849 BIRC3Q13489 604 aa23.84■■□□□ 1.41
CASC3-207ENST00000581849 RUNX3Q13761 415 aa23.84■■□□□ 1.41
CASC3-207ENST00000581849 PDGFRLQ15198 375 aa23.84■■□□□ 1.41
CASC3-207ENST00000581849 NFIL3Q16649 462 aa23.84■■□□□ 1.41
CASC3-207ENST00000581849 TDRD10Q5VZ19 366 aaKnown RBP23.84■■□□□ 1.41
CASC3-207ENST00000581849 CC2D1AQ6P1N0 951 aaPredicted RBP23.84■■□□□ 1.41
CASC3-207ENST00000581849 TMC2Q8TDI7 906 aa23.84■■□□□ 1.41
CASC3-207ENST00000581849 ELOVL4Q9GZR5 314 aa23.84■■□□□ 1.41
CASC3-207ENST00000581849 EPC1Q9H2F5 836 aa23.84■■□□□ 1.41
CASC3-207ENST00000581849 NME7Q9Y5B8 376 aa23.84■■□□□ 1.41
CASC3-207ENST00000581849 C4BPAP04003 597 aaKnown RBP23.83■■□□□ 1.41
CASC3-207ENST00000581849 PTPN1P18031 435 aaKnown RBP23.83■■□□□ 1.41
CASC3-207ENST00000581849 CXCL12P48061 93 aa23.83■■□□□ 1.41
CASC3-207ENST00000581849 CASP4P49662 377 aa23.83■■□□□ 1.41
CASC3-207ENST00000581849 TNK2Q07912 1038 aa23.83■■□□□ 1.41
CASC3-207ENST00000581849 CCINQ13939 588 aa23.83■■□□□ 1.41
CASC3-207ENST00000581849 ZNF699Q32M78 642 aa23.83■■□□□ 1.41
CASC3-207ENST00000581849 MDH1BQ5I0G3 518 aa23.83■■□□□ 1.41
CASC3-207ENST00000581849 HPS4Q9NQG7 708 aa23.83■■□□□ 1.41
CASC3-207ENST00000581849 GCNT4Q9P109 453 aa23.83■■□□□ 1.41
CASC3-207ENST00000581849 NXF1Q9UBU9 619 aaKnown RBP23.83■■□□□ 1.41
CASC3-207ENST00000581849 IKBKBO14920 756 aa23.82■■□□□ 1.4
CASC3-207ENST00000581849 CALUO43852 315 aaPredicted RBP23.82■■□□□ 1.4
CASC3-207ENST00000581849 ENPEPQ07075 957 aa23.82■■□□□ 1.4
CASC3-207ENST00000581849 DPYDQ12882 1025 aa23.82■■□□□ 1.4
CASC3-207ENST00000581849 USP4Q13107 963 aa23.82■■□□□ 1.4
CASC3-207ENST00000581849 NCOA4Q13772 614 aa23.82■■□□□ 1.4
CASC3-207ENST00000581849 GAS6Q14393 721 aa23.82■■□□□ 1.4
CASC3-207ENST00000581849 MTF1Q14872 753 aa23.82■■□□□ 1.4
CASC3-207ENST00000581849 ZNF667Q5HYK9 610 aa23.82■■□□□ 1.4
CASC3-207ENST00000581849 TSSK4Q6SA08 328 aa23.82■■□□□ 1.4
CASC3-207ENST00000581849 KRBA2Q6ZNG9 492 aa23.82■■□□□ 1.4
CASC3-207ENST00000581849 KIAA1958Q8N8K9 716 aa23.82■■□□□ 1.4
CASC3-207ENST00000581849 B3GALNT2Q8NCR0 500 aa23.82■■□□□ 1.4
CASC3-207ENST00000581849 TAF4BQ92750 862 aa23.82■■□□□ 1.4
CASC3-207ENST00000581849 CCDC34Q96HJ3 373 aa23.82■■□□□ 1.4
CASC3-207ENST00000581849 A8MXQ7 604 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms